ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177903 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◣ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2
FRG2C
PMF1-BGLAP
PMF1
COL23A1
DUX4
MAMDC2
ART1
FANK1
LMLN2
TTLL12
KLHDC4
B4GALNT3
PHB
ZNF487
SUPT6H
SDF2
PMAIP1
SNX11
CBX1
ZNF264
NARF
CYBC1
PAXBP1
EEF1A1
CANT1
LOC102724770
DGCR6
MRPS7
GGA3
MIF4GD
PDXDC1
POTEH
UNK
H3-3B
NDFIP1
FAM117A
OTUD7A
SHOC2
BBIP1
FH
ATAD2
TCF7L2
NBPF1
MPZL1
CACUL1
KIF5C
ZMYM3
ZSCAN25
PHC2
MTRNR2L8
BAG3
BAGE4
BAGE
BAGE3
TMEM71
PHF20L1
CYC1
ALKAL1
MAF1
UBALD2
CCDC137
TTYH2
RPL38
ZFP91
LPXN
STX12
AHI1
USP10
GRB2
THOC3
WASHC5
NSMCE2
LEMD3
ABRAXAS2
OR8J3
TRAP1
CCDC30
ZMYND12
PPCS
ACSL3
CTAGE8
CTAGE4
SLF2
KIAA1549
REPS1
DNASE2
PDCD6
DDX17
SMC3
ZNF12
TRMT1
NACC1
MCMBP
SMNDC1
CLN6
C8orf76
UROS
BCCIP
EPN1
EXOC6
TNFAIP8
PRR14
FBRS
ABCD3
LOC100289561
NME2
SPDYE6
VKORC1L1
MSH3
DHFR
MTRNR2L2
SCAF11
EIF3F
SMAP2
WDR43
KLF5
SURF4
C10orf88
EXOSC2
CSNK2A2
ATG16L1
CHORDC1
ATL2
UBR5
ZKSCAN1
IMMP2L
PCOTH
MIPEP
C1QTNF9B
ZNF652
PLEKHA1
SEC61G
DNAJB12
FBXO11
MTMR4
ICE1
SPAG9
SPDYE13
DPP9
SEPTIN9
NDUFAF6
PPA1
TEX10
DYRK3
TACO1
TAF10
RRP8
ILK
TPP1
C15orf40
C7orf25
PIGF
CRIPT
SPATS2L
PRKACB
TSPAN10
NPLOC4
CCDC186
MTX2
BICD2
TDRD1
ST14
ABCA5
EFR3A
FBF1
SCGB1C2
XPO5
POLH
LRRC47
DYNLL2
PKD1
ARHGAP11A-SCG5
ARHGAP11A
CPT1B
CHKB
TADA1
SERF1B
SERF1A
ABL1
POMZP3
CEBPG
MYO5C
MTHFD2L
WAC
DPP8
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3D
GLI4
MSANTD4
TEPSIN
NDUFAF8
RPS15A
TBC1D3L
TBC1D3B
MTERF1
SMAD5
ZNF326
EIF2AK3
SEC62
KRTAP4-11
KRTAP4-12
SCGB1C1
ODF3
RMDN1
CPNE3
WAPL
PANK2
BSPRY
SRSF5
NCBP2AS2
NCBP2
SIN3B
IREB2
DECR1
ARHGAP29
USP7
ARHGAP39
HIPK1
GSTO1
IKZF5
ACADSB
ASPH
E2F3
SMARCE1
CLK1
MSRB2
CCZ1
EIF3A
WNT16
SAMHD1
ZDHHC6
VTI1A
EHD4
ALAS1
PKD2
LATS1
SPDYE16
DSCC1
BFSP1
POM121C
RBM42
PREP
MRPL20
SPDYE5
RDH14
CCNL2
ESCO2
DSTN
PLEKHA3
FKBP7
C8orf33
HGH1
MROH1
COPG2
ETNK1
ADAR
PIK3CA
LGALS4
VOPP1
ECE1
TMEM139
CASP2
MTDH
SDR42E1
TMBIM4
TRMT10C
CLTA
GAN
GPI
SUMO2
PDCD4
JMJD1C
TBC1D30
KAT5
RNASEH2C
REXO2
GNS
RPL13
CACTIN
TM2D2
ADAM9
OR2A7
PDP1
FAM234B
MTRNR2L1
LSM6
ARF6
RCN2
CALCOCO2
FNBP1
KRCC1
NOL4
COL4A4
COL4A3
SLC45A4
PDXK
C1orf105
PIGC
SCYL3
TMX4
WWP1
FXYD3
FAM13B
ZBTB6
RC3H2
ZCCHC8
CRLS1
PIP4P1
PNP
OSGEP
APEX1
TSPO
MCAT
SLC38A2
SBF1
RBM22
C11orf97
GSK3A
ADM2
VAMP3
SAFB2
SAFB
MEIS3
OAT
SS18L2
SEC22C
CLTCL1
ETS2
CBX2
RECK
ALDH7A1
SMARCD2
SENP1
PFKM
GLS2
PHAX
MYD88
ACAA1
USP36
YTHDF1
FAM169A
SEC11C
FBXO31
ACOX3
TRMT44
RWDD2B
KIAA1586
POMP
MAP1LC3B
RBPMS
DPAGT1
USP16
C2CD2L
CCDC138
TBXT
KLHL41
TESK1
MKRN1
PLA2R1
DUSP5
FARP2
RFT1
FADD
ZNF706
H2AC16
MS4A1
HPS6
ARMH3
GFI1B
PRPSAP1
DGKZ
TSC1
RPS27A
CLHC1
LEMD2
MYLK4
ELOVL5
WRNIP1
NPC1
IGSF3
TPT1
OR2J2
ZNF623
TEX46
KDM1A
TIGD2
MRTFA
PLEKHF2
ANKRD46
FAM83D
GPS2
EIF5A
RALGAPB
MYBL1
MICU3
ANAPC7
RAB11B
TMEM131L
USP33
LRCH3
HNRNPM
ELOB
FAM124A
MRPL38
NDUFAB1
TRIM65
PLGRKT
OXR1
TBC1D31
PRDM4
ANKLE2
RAB4A
PAWR
RGS22
NOTCH2NLB
SURF2
SURF1
RPL7A
MED22
FERMT1
RAB5A
EFHB
MAPKAPK5
DNMBP
OSBPL5
CYB5R1
ADIPOR1
GJB2
TMOD3
SLC25A37
TMEM245
EXT1
TBL2
ATP8B1
RAB18
AKIRIN1
PREPL
CAMKMT
MEST
VPS9D1
FLYWCH1
TMEM160
EFCAB14
ELOVL7
PIAS4
RC3H1
PGAM5
YPEL2
ZNF775
METTL23
JMJD6
SPATA6
RUVBL1
SBNO1
HGS
ARL16
FRG1
PRELID3B
TM9SF3
EEFSEC
UBE2Z
PMEL
TMCO3
DCUN1D2
RP9
RAB5B
CDK2
PGS1
LRRC58
SOCS5
INTS8
PAG1
UTP18
MBTD1
DNPH1
PRDM2
ATP2A2
OTUB1
ARSB
ZBTB10
FEM1C
COX18
SYT1
RAB6A
CXCL2
SORBS2
UBE3A
PDPK1
ARL8A
GLG1
KRT19
PELI1
ABI1
CEMP1
PCNX2
ERO1A
AGO2
ACVR1B
DOCK5
COBL
KRT15
ANGEL1
RNF169
HERC3
KRT10
ANTXR2
VPS13C
C2CD4A
TAF5
TSPAN3
MGRN1
CYTH1
RB1
ANAPC11
ALYREF
TBC1D3K
TBC1D3F
OCIAD2
TBC1D3
FANCA
MCL1
SCN8A
UBE2G2
DENND10
OR2B6
DOCK1
TBC1D3E
LBR
ACADS
SLC25A28
PM20D2
FBXO33
SUFU
ACTR1A
NF1
BMT2
TMEM175
GAK
UBE2S
SLC4A7
CTNNAL1
CHL1
EGFR
PEX7
NFAT5
SPG11
TBPL1
TRAPPC3
MAP7D1
HMGCR
RAPGEF5
NEDD1
MARCHF6
CTAGE6
GTSE1
UHRF2
TOB1
SYNPO
RPL7
RDH10
P4HB
FDX1
ACTL8
ASF1A
NT5C2
DYRK1A
RRAS2
TERF2
GMCL1
NAMPT
YWHAH
C22orf24
MAP3K3
VIPAS39
AHSA1
HSP90AA1
SLC38A10
PDIA5
APPBP2
GIMAP7
NOTCH2NLA
EPS8
CYREN
BZW1
NFATC2IP
PLEKHG1
PDE6G
ZNF607
GRPEL1
MFSD12
EIF2B2
LGALS3
ILKAP
ISL1
PALM2AKAP2
HNRNPAB
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
UBN2
CLTC
NUDT4B
GPN2
TRMU
PSME1
EMC9
CDR2L
ZFYVE27
XPA
FITM1
SEC63
MAPK9
LPGAT1
HSPA4
CLYBL
USP43
CDC25A
SMARCB1
MST1L
FRMD5
UBN1
GLYR1
CPT2
NT5C3A
MRPS36
ARID2
HEBP2
PSMG4
ITPRIP
WASHC1
ARFGEF1
GOLGA7
ITM2B
DENND2B
ALDH4A1
TMEM131
PPP1CB
CCNT2
GFPT1
AP3D1
UVRAG
EPB41
PRIM2
RNF207
RPL22
EMILIN1
OST4
URGCP
GPX1
URGCP-MRPS24
RAD23B
SPATA5L1
GATM
SLC25A1
PCYT2
MIS18A
RAB2A
ARHGEF35
SIRT7
MAFG
STIP1
CD9
SMAD1
ATP1A1
AGK
DYNLRB2
CNKSR3
RNF145
MARK2
TOMM34
STK4
LRPPRC
GPRIN1
SSRP1
P2RX3
FAM104A
C17orf80
DCAF12
GPC1
PDCD5
PSTPIP2
ARHGAP17
XPNPEP1
NHLRC2
DCLRE1A
MICOS10-NBL1
MICOS10
CD81
ZNF577
SLC38A9
CRELD1
FAM86B1
ACSF3
SART1
YWHAZ
NANOGP8
SMAD3
NUDCD1
LSM11
APEH
C9orf85
ABHD17B
ANK2
DHRS11
MRM1
ARL5A
DENND1A
DOCK9
SPATA6L
PLPP6
MORC4
MATN2
URB1
MKI67
PLCG2
SRPRB
C1GALT1C1L
PARK7
GTF2A1L
POLE4
STAT3
VAMP1
LRRC59
RTN4
CTNNB1
STX1A
RNF135
PINK1
DNAJC1
CTPS1
VRK1
ZC3H4
CLSTN1
NOP9
DHRS1
RALYL
TYRO3
HOXC4
MTR
KLHL20
USP6NL
CRKL
EEF1AKMT2
FBXL13
ARMC10
OSBPL8
DERA
SPG7
SCARB1
ARHGEF3
MAGEF1
CENPC
TSPAN14
SYBU
STK3
RABL6
FCHO2
HSPH1
AGTPBP1
FZD6
CISD3
TPD52
CCDC183
CXCL1
SEMA4D
NAF1
MTAP
FAHD2A
KIRREL1
TM4SF20
MIF
TGFBR2
SOD2
PNPO
CYRIB
WTAP
NSD2
TXNDC9
EIF5B
VPS26C
MTMR12
PHF11
NELFCD
TMEM51
C10orf95
TPMT
KDM1B
ANKRD28
ZCCHC14
MTFMT
FKBP4
CCNJ
TMCO4
MITD1
MACROH2A1
TRAM1
PTPRF
RHOC
HNRNPU
PPM1J
MIEF1
FAM53B
ERRFI1
COP1
FAM219B
KLHL5
COPRS
GALNT12
SINHCAF
SBK1
TOP1MT
SDHA
CCDC127
RHPN1
LRRC37A3
RNF168
PGM2
UBQLN1
C6orf226
ADPGK
KCTD6
COX6C
STAMBPL1
EXT2
FUCA2
SLC26A6
CHAMP1
EIF3B
HASPIN
ZBTB8A
RRS1
ADHFE1
STPG1
NIPAL3
SCD5
HACD2
NCKAP1L
HMGB1
CCDC88A
ZNF227
TNFSF9
APOC1
EYA1
GHITM
CNN3
HIPK3
SOCS3
SRSF2
MFSD11
ENTPD7
ZC3H7A
ITGA3
STMND1
FAM153B
PTPN4
FOXJ3
PHB2
HEXB
NDUFS6
MRPL36
ATRN
TICRR
DGKH
UNKL
RNASEH1
ODF2
TADA2B
RHNO1
FOXM1
C22orf39
SPEG
RELCH
PIGN
PPP6R2
DBNDD1
H2AZ1
DNAJB14
GAS8
CNNM2
MSH6
STX17
FAM91A1
SLK
PLBD2
TTBK2
CCDC96
FAM110C
C2orf69
SCAND1
KDM3B
SULT1A4
SULT1A3
GOLGA6L10
NT5DC1
PTP4A2
B9D1
EIF2S2
DLG2
DEF8
MYO7B
KRIT1
ANKIB1
SLC25A10
MRPL12
B4GALT4
IWS1
ZNF362
ARPC1A
PTBP3
ELOA2
SCRN3
CIR1
OTULIN
RPL14
STX3
PLEKHH2
TRERF1
DUT
MRPL52
MMP14
RBM12
CPNE1
ELK3
CDCA7
DUSP6
TMEM109
DOCK7
NUS1
DESI2
UNC45B
NLE1
FBXW8
WASHC2C
QSOX1
MLYCD
COTL1
ODC1
TANC2
PROSER1
NHLRC3
COA8
BAG5
PRPF19
PANK1
JPT1
COG6
NDUFV3
PDZD8
TEAD1
PWWP3A
CCDC178
IRAK2
EMC8
COX4I1
KCNJ1
GATAD1
PISD
PRRC2B
MEF2D
HDAC1
MARCHF8
YES1
SLCO4A1
RCL1
UBFD1
EARS2
FBXO42
CFAP100
RNF139
GSTT2B
GSTT2
DDHD2
DDTL
DDT
CAPN2
PCDHGB1
PCDHGA3
PCDHGA4
TAF9
RAD17
AK6
OSBP
PCDHGB2
DPYS
POMT2
GSTZ1
UAP1
FEZ2
LYRM1
DCUN1D3
ROCK2
IFT43
POPDC3
TGFB3
CYP2A13