ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX028591 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◣ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

ZNF436
BRSK2
ZNF280A
OBSCN
MKLN1
ZNF572
SMYD3
TSKU
ZNF3
LDHD
TATDN2
ST20-MTHFS
ZSCAN31
ZNF433
ZNF878
RBM33
SUMO3
CPA2
IL21R
EIF4EBP1
ZNF792
ZNF32
ZNF555
TMEM44
ZNF165
ATP8B2
AQP10
ZNF623
GORASP2
ZNF614
PRKAR2B
EXOC3
ZWINT
AADACL4
ZNF514
ART1
KRBA1
NARS2
IL36A
C1orf167
ZNF491
ZNF440
ZSCAN29
TUBGCP4
F2RL3
GTPBP4
GLRA1
B3GNTL1
ZNF189
MRPL50
KAT6B
GJC3
ZNF501
ZNF502
LONRF2
LMTK2
ZNF441
ATP5F1B
ADCY3
ZNF300
TGIF1
THEM4
GAMT
ZDHHC14
FN3K
POM121L2
ELAC1
SAMD9
KIF5C
YY1AP1
DAP3
ZBTB8B
THUMPD1
ZNF134
MYOG
CEP85
MBOAT4
DCTN6
MROH7
ZNF169
ZNF222
CACNG1
BCR
ZNF594
KCNJ15
DTWD2
RSF1
AAMDC
LCN8
LCN15
LCN6
GSTM5
CDYL
IRAK2
UQCRC1
TMEM89
LEP
TLE7
H4C8
ZNF439
AFAP1L1
SETDB1
ZNF75D
LGALS12
PLAAT5
ZSCAN32
ZNF174
TTC7B
MAP1LC3B2
IL22RA2
APOL4
DIP2A
PPIG
ZNF426
MIER1
DNAI4
ZFP69
ZNF57
ARHGAP39
TEAD2
DKKL1
YPEL3
TBX6
TAS2R39
ZNF347
ZNF708
HTR7
RTCA
DHRS7B
TDP2
ACOT13
SNCG
MMRN2
GOLGA5
LLPH
ZNF317
RNGTT
COL18A1
COMT
CCL24
TXNRD2
MON2
DUXB
ZNF761
ADAR
ELFN1
MTRNR2L8
FAM184A
SARS2
MRPS12
CD2
CYB5R4
SAMD7
COQ8A
LOC102724265
TACC1
ZNFX1
SLC1A7
TRIM32
ASTN2
TMEM140
GAL3ST2
ZNF350
MRPS33
SELENBP1
DGKH
TBC1D22A
C19orf18
ZNF454
ZNF577
ASH2L
OPN1SW
ZNF777
TOPAZ1
TRIM69
CABP5
ST6GALNAC1
ZNF394
PRDX6
ADI1
KAT6A
GLO1
ZNF263
ZNF438
IGFALS
ENG
ZNF669
BPIFB3
EHHADH
GCNT7
FAM209A
RBM26
ADCY10
METTL7A
APOL2
APOL1
MAMDC2
TMEM62
ZNF891
ZNF10
CATSPERE
ADSS2
SNX20
ZNF20
RNF126
FSTL3
CFAP43
FAM234B
MAP3K4
SYT3
SWAP70
UBE2F
CYP17A1
ZNF662
PRRT1B
PHRF1
LZTR1
SPIDR
ANKFY1
KRT25
KRT26
ETNK1
SGPP1
CFAP20
ACER2
SOX30
POM121C
NDUFS4
RIC8B
GHRHR
ANKRD65
MRPL20
C4B_2
C4B
LOC110384692
C4A
HERPUD2
LBP
FKBP5
PARP15
PDE7A
EIF4A3
IER3IP1
GALNT1
ACP6
POM121
TCF25
OSBPL8
TANK
DUX4
POLK
CERT1
ZNF443
BORCS7
PARP16
RMND5A
KIF15
KIAA1143
TRIM38
ASS1
GPRC5C
ACYP2
CCDC6
AGGF1
ABL1
ZNF398
ZNF425
SCCPDH
HLA-C
IL13
ZNF35
RALBP1
ZNF683
IQGAP1
KRTAP10-9
RBMXL2
ATF1
OR6F1
LMLN
IQCG
PEX7
FBXO8
CEP44
CDCA7
SLC27A5
ZNF83
KDM3A
NOS3
BANP
IFNAR1
AQP11
IFI6
CATIP
OAS1
ZBTB5
EFHD2
TMEM35A
PER3
LOC100289561
UBE2D3
CISD2
ZBTB17
GTDC1
PRIM1
HSD17B6
ATXN2L
SLC35G5
GTPBP6
SPAAR
HRCT1
APOBEC3B
LRRIQ4
LRRC34
C1orf158
SNIP1
DNALI1
RP9
ZNF143
ZNF780B
CCDC181
OR10A5
SMCO1
RNF168
CCR7
UBAP2L
C1orf43
MSRA
PPP5D1
CALM3
ZFP36L1
ZNF562
PDRG1
CYP2A6
ERGIC1
C1RL
PXMP2
POLE
CPT2
ACTR3C
LRRC61
SPACA3
TAMM41
PRKACB
ZNF679
ZSCAN30
SNAP47
ZNF230
MS4A6A
ERCC6
MSH3
DHFR
MTRNR2L2
FOLR3
ZMYM6
WAC
SULT2A1
IMMP2L
COLEC11
APOD
C9orf153
PRSS38
VPS37C
GAS2L3
TRIM25
DDX19B
CALML3
ZNF550
FRG2C
ZNHIT6
WDR33
FRG2
PDP1
MID2
CHIT1
BSDC1
FAM153B
ZNF24
LOC102724770
DGCR6
FGD3
ITGB3BP
EFCAB7
RGS18
CNGA1
PDE11A
DBNDD2
RHOT1
GLT6D1
MANEA
COL23A1
CRP
ANP32D
COX6A1
GPR35
TTLL1
LMLN2
ADAM21
ZBTB26
RABGAP1
ZNF117
APOC3
APOA1
PTPRN2
CYP2C9
MYH2
RGS21
SHISAL2B
PTGER2
TLR2
C2orf88
SLC30A7
EXTL2
COQ9
CIAPIN1
CFHR4
SULT1C3
DEGS2
EDF1
FEM1C
BCAR3
PIP
ACY3
FAM193B
C10orf143
B4GALNT4
ZNF527
OR4K17
SLC28A2
TMEM229B
BTBD8
NKX1-1
ZNF324B
ZNF132
BAAT
CNOT3
VPS13D
MRPS16
TSPAN5
PADI4
AKR7A3
NT5C3A
METTL8
C2orf66
INKA2
DDX20
HACD2
MINDY3
IFNAR2
DCAF17
TMEM242
ST3GAL5
DMXL2
NXPE4
RBPJ
NUF2
YJU2
PXDNL
RBBP5
MTF2
SPATA33
RAB37
CTAG1B
CTAG1A
PNMA3
PPP2R3A
FDX1
YWHAQ
CALCB
C2orf69
SNX11
CBX1
SAP130
RABGAP1L
DIP2B
NARF
DNAJC25-GNG10
DNAJC25
DIO2
CLIC3
ZKSCAN7
TTC30B
PSMD8
ARHGAP45
GBA
NRARP
CAT
RTP5
MAPRE2
ZBTB44
FAM227B
DTWD1
ACAA2
TMCC3
CHD1L
POLD1
NEMF
RPS7
PAIP2B
RSU1
DUSP6
MTRNR2L1
DMAP1
ZFP30
SAMD4B
GMFG
MRPL55
SRPRB
AURKAIP1
FRMPD4
C1GALT1C1L
SF3A3
TMPRSS12
TEDC1
CYBC1
CRIP1
SSBP1
ZNF627
RPL39L
SMIM31
FASTKD1
SUPT6H
SDF2
CRIP2
PAXBP1
SDR42E1
ACBD6
COX16
ABLIM2
FGL2
RPL10L
CLEC4M
RFC1
EXOC6
PLA2G4E
FBXO31
TIMELESS
SAMD14
GRAMD4
JMJD1C
PDCD7
MAD1L1
TYW3
CRYZ
TBC1D19
CLPP
FRRS1
TESK2
MMACHC
CCDC163
MAP3K2
ACOX3
PNPLA7
MRPL41
SELENOH
EPB41L2
MACC1
C16orf54
NOX5
RPS29
ZNF341
CD209
B3GALT2
NUDT15
CCDC130
TMCC1
MYLK
CREBL2
HAUS5
FAAH
DCP1A
FRA10AC1
ZNF487
RNASET2
TRIP4
PCLAF
SLC2A7
NCKAP1L
SATB1
PEX3
ADAT2
RPL27
RPL11
IFI35
MRLN
UCKL1
ZNF613
REM1
DEFB124
UGT1A10
HTR5A
TMX2
MED19
SEM1
COMMD2
NFE2L3
MED23
ENPP3
LRIG2
CANT1
OAZ3
RBBP9
LILRA5
C1orf159
C3orf14
B4GALNT3
POU2F1
CXCR2
GPD1L
SPATA13
WDR3
GDAP2
BTN3A3
TTC32
BAX
CHST3
NBPF1
DSTYK
NPAS4
LUC7L2
TMEM14C
MOB3A
IZUMO4
TM9SF2
KIF2C
FMC1-LUC7L2
FMC1
TTLL12
ZER1
MRPL9
SMAD1
PIAS2
SUPT7L
SLC4A1AP
SPANXB1
SLC24A1
INTS14
THOC5
TATDN3
NSL1
ACTL8
VBP1
FKBP9
RPGRIP1L
FTO
EFCAB10
TRMT44
CALD1
PARK7
LSS
ETFBKMT
LRP5L
ZNF566
STX18
TMEM125
SLC38A9
EIF2D
PIN4
ZMPSTE24
CRLF2
SPATA22
MDM4
INTS12
GSTCD
EAPP
NME1-NME2
NME1
SLC41A3
TBC1D13
SLC33A1
TMEM106C
CLTB
TEX50
SCAF11
NDUFS7
GALK2
TMEM262
TACO1
FKBP11
FEM1B
LHFPL4
MAPK10
FAF1
PGLYRP4
TMEM161A
PCYOX1
ITPR2
ASPA
SEMA3D
LIMS2
C5orf60
MTERF1
CEACAM21
ZNF391
RERE
LARP1
NRL
DCAF11
TMCO2
RPL37
CARD6
SAR1B
POLR3B
CALCRL
BRF2
NEU1
LSG1
NTSR2
LRP5
CADM2
SLC17A5
REXO4
ADAMTS13
REEP3
PLK2
MNAT1
TEFM
RTP3
LTF
TM9SF1
GTF2H2C_2
DUSP16
UBE2H
ZNF589
FABP6
NCOA7
ZNF611
CYC1
ERN2
PROKR2
ATP9B
DHRS2
S100A2
HLA-E
SMIM12
RRAGB
DLAT
MLLT1
KCNMA1
TMEM41A
DRG2
CASP10
STC1
VN1R4
RPS14
GTF3C3
CD14
ANGEL2
CTSF
HMGB1
WDR36
MIPOL1
RMDN2
GCNT1
DNAJB12
CYP46A1
UTP3
ZNF829
ZNF568
CCDC59
C10orf99
RGPD2
RGPD1
SERHL2
LPIN1
CYP4X1
SRSF7
PRDX3
RTTN
ACSM2B
PPIP5K2
GIN1
VARS2
GTF2H4
NDUFV1
TRMT5
SLC38A6
ALG10B
TTC26
USHBP1
BABAM1
GTF2H2
STX16
ST6GALNAC6
CNIH4
CHMP7
POLR2J3
PAFAH2
INPP4A
TEX46
KDM1A
ATP5MC2
TMBIM4
WDR11
ERV3-1-ZNF117
ERV3-1
CASP4
SKP2
LMBRD2
TFPT
PRPF31
PIK3R1
MAGEB1
MACROD1
MOB4
ATL1
CNOT6
AP3S2
GTF2A1L
RPIA
POLDIP3
TFPI
DNAJC3
ATP6V0A1
GPAA1
EXOSC4
INTS5
GANAB
GTF2H2C
VTA1
NMBR
TMEM68
TGS1
PDCD6IP
USPL1
ZNF772
GABPB2
SPATA6
RAD54L2
ZC3HAV1
PSEN1
INO80C
MTR
L2HGDH
DMAC2L
C9orf64
TXN2
DEK
NCEH1
AIG1
POLR2J2
RUVBL1
ALDH3A2
CLEC12A
DPY19L4
SPANXC
TBC1D14
ZKSCAN3
KANSL3
FER1L5
C1QTNF1
RPL32
RWDD2B
RAB30
MYO5C
SLC25A51
ESR2
TAF12
INPP5F
POLE4
PDCD2
STAT3
ATF7IP
MS4A10
NME4
DECR2
FNIP2
CCDC150
DGKQ
CLK4
MRPL44
FAM120B
NDUFB3
FAM126B
DISP1
NPR1
ILF2
VAMP1
IPO4
ZNF557
PUM1
BAIAP2
METTL27
EIF3F
ALDH7A1
TOP3B
DNAJC6
ACTRT3
DNM1L
TBCK
DCLRE1B
AP4B1
AIMP1
PXDN
TOR1AIP2
TOR1AIP1
BFSP2
KMT2A
ALKAL1
CLDN4
SAMD4A
UBN2
TTYH2
AGL
ZNF408
ARHGAP1
ZDHHC9
TMEM43
CHCHD4
KSR1
ATP5MF-PTCD1
ATP5MF
STK19
DXO
SRFBP1
CCNT1
DCAF10
PPP1R3B
SLC44A1
TULP4
MAP3K19
KRTAP5-2
IFIT1
PPM1K
CFAP298-TCP10L
CFAP298
NMNAT2
MRPL40
HIRA
ADNP
PRAMEF1
LY6L
EDNRA
TIGD2
MITD1
MRPS31
TTI2
TXNL4B
DHX38
GTF3C5
CDK5RAP1
RPL30
CCDC97
PLEKHM3
PPP6R1
RCAN1
PAAF1
AP3B1
EPRS1
LBR
ZNF582
MOS
KLHL41
CAPN11
MTIF2
TSEN15
NUP54
SLTM
PDE4DIP
ESCO1
SLC45A4
LMBR1L
JMJD4
OR8B3
CAMP
TAAR9
PHB
PHGDH
C5orf34
BAG3
OR1E3
CEP72
CDC73
STXBP5L
ARRDC2
BDH1
TMBIM6
LIMS1
PTRHD1
CENPO
MRPL21
IGHMBP2
RNF217
FAIM
H4C12
H4C11
WDR74
BNIP1
DNAJB13
EML2
PSMF1
NR1H3
ACP2
TMEM202
MRPS18C
HELQ
CYP4F22
COX7A2
CCNC
VPS11
TBL1X