ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX014752 | NB-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◣ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

FLOT1
PLCB2
NADK
LAPTM5
NCOA2
HMGCS1
PPCDC
SKIL
ARHGAP4
UNC13D
CD38
MTRNR2L2
LCOR
C5AR2
GFOD1
NIBAN3
SERPINB1
DHRS3
SPATA1
GNG5
CALR
MTRNR2L8
SREBF2
PCNA
ARHGAP45
CDS2
RASGRP2
DZIP3
CIP2A
MBD6
MAP2K3
FGR
INSIG1
COX20
MYO1G
MYO1F
IDH1
UPF3A
ARIH2
P2RY2
RPS6KA1
CENPH
KRI1
ZCCHC24
NFKBIA
NRL
FDPS
DCAF11
FDFT1
MKLN1
NFIC
KAT6B
SSH3
NLRP3
LYL1
ICAM1
BAZ1B
DENND4B
RASSF2
SLC25A19
EXOSC4
C16orf54
RBM15
C11orf91
KAZALD1
DRAP1
C11orf68
PSMD3
DNAJB1
PKN1
POC1B-GALNT4
EMP3
MSMO1
KRAS
KEAP1
ZNF740
CSAD
SNX15
FADS3
SEC14L1
CTBP2
INAFM2
RARG
LYST
GHDC
CEBPE
CYBA
BHLHE40
RAB11FIP1
MRPS31
RAB3D
ARHGEF18
SREBF1
BIN2
SMARCD2
ADGRG5
EPM2A
TBL1XR1
HUS1
NDUFA4
PIK3AP1
PACC1
SMIM20
AGTRAP
LRMDA
CDCA7L
HMGCR
PDE12
EVL
NPEPL1
H4C11
DUSP10
TCTEX1D4
BTBD19
GRK2
PTPRCAP
SLC35D1
NOL4L
SLC22A18
E2F3
LST1
YARS1
S100PBP
FERMT3
NR2C1
P2RX5
IMPDH1
UBE2E1
MTRF1L
CFD
CSK
AP2S1
TM4SF19
ALOX5AP
KRT8
ARRB1
CYP51A1
SH2B1
ANKRD13D
RAP1GAP2
AHNAK
CCDC174
ASB1
EVA1B
PLIN2
MYBPH
HSP90AB1
SQLE
HIVEP1
NINJ2
TANK
JUP
RAB37
TRIB3
ANP32E
DUS1L
ADGRG3
GPCPD1
NCF1
ZNF746
RBBP5
GBE1
SMCHD1
UROD
HECTD3
WDR43
ARL4A
CD1D
IFNGR1
PKN2
ATF3
PIKFYVE
ANKRD10
MCRIP1
TPRA1
PEAK3
MAP3K8
H4C15
H4C14
RMND5A
PWWP2B
TAGLN2
RCAN1
TBC1D10C
SMG6
UMODL1
CTTN
SLC1A5
C12orf75
SLC12A6
SLC16A3
ETFBKMT
ZNF414
DENND2D
SIPA1
TLR9
CPSF4L
MPG
CTDSP1
PLEK
SH3BP2
PPP2R5B
SELPLG
GPR160
ICAM3
MINDY2
RARB
CDK13
SH2B2
PDE8A
ADRM1
SEPTIN9
C3orf86
TRAPPC5
NKIRAS1
NR1D2
SH2B3
H4C9
S1PR4
GMIP
MTRNR2L9
OPA1
CAPS2
PDCD4
ATXN7L2
BAZ2A
LRPPRC
LDLR
DENND6A
GFI1
S100A2
PCYT1A
SCD
ZNF217
TMEM101
AXDND1
FBXO41
ACACA
CTCF
LOC388282
H6PD
ATP2A3
GPR132
TSPAN32
C11orf21
PCNX3
PPARG
WNT10B
TRPM2
TREM1
RBKS
BABAM2
GPATCH8
MVK
KBTBD2
POM121C
P2RX1
SLC17A9
PRTN3
MYADM
KLHL24
LY6K
CCDC154
RGPD2
RGPD1
STEAP3
PHF19
CLTC
ZDHHC17
NCOA4
NAMPT
KCNAB2
MTHFR
CLCN6
NDRG2
CCDC9
PRNP
LZTS2
IRF2BP1
LONRF3
MICAL1
CHPT1
VPS72
BPI
MPO
TRIM11
ICAM4
OGFOD2
PLEKHA8
PRKCD
MTF2
UBE2J1
TBC1D14
TMC8
PMPCB
PTCD1
CPSF4
ATR
ZGPAT
ARFRP1
TAF1A
HBP1
LINGO1
H4C13
QPRT
COPS7A
TEX2
MFAP4
QRICH1
DOT1L
C19orf53
HSPH1
LPCAT3
STK35
ZNF584
FRA10AC1
NOG
ADM
STK3
PPRC1
KMT2D
CAMP
BORCS7
VIPR2
TFAP2A
LIMD2
ZSWIM9
LIG1
PIP4P2
CPQ
NUDT15
PLEKHA2
H4C4
GOLIM4
MRPS15
ITPRIP
DOCK2
MYO18A
IQGAP2
LZTFL1
KLLN
SPN
MAPK12
SRF
NTSR1
LRRK2
KANSL3
ZNF846
BANP
RNF149
FKBP5
NEURL2
CTSA
EP400
TNFRSF10A
ZNF76
CCDC59
FRAT1
RIOK3
EPS15
SNUPN
LMNA
SKIDA1
MAFG
FBXO6
FCRLB
SP1
CUL2
LSG1
UCN2
ZDHHC4
DYRK1A
C3
IFRD2
KCNE1
DMAP1
MIEF1
C5AR1
NDUFS7
DUSP6
ING1
MAP1LC3B2
SC5D
SPRING1
RNFT2
NIT2
UCP2
VDR
NFIA
LTA4H
APBB1IP
UHRF2
UBR4
GDPGP1
CIB1
PIM3
C15orf62
ATXN2
DHX33
PEX5
AFF1
EVPLL
ATP11A
YWHAQ
HDDC3
CNOT2
CLIC4
H4C12
CDC42EP4
CHD9
ZNF317
RBPJ
MFN2
TM7SF3
HSD17B7
RWDD1
KMT5A
POLG
TBL2
AHCYL2
TMBIM6
ZYX
UBC
SREK1IP1
CWC27
DNAJB2
MLEC
TPD52L2
BCAT1
CCL5
PRSS57
CCNL1
PSMF1
STING1
NOTCH1
PGLS
DAGLB
ENO1
SMAD3
TBP
PSMB1
COMMD4
SETDB1
SCAP
DNAJB12
MAPK8
CCL3L3
CCL3L1
CCL3
TRIM14
NKG7
PARP2
KDM3B
B2M
SLC25A15
MRPL24
FCN1
MRPS23
HMGN4
PHETA1
MTRNR2L10
FOXP1
SCAMP4
ADAT3
EIF3G
ANKRD33B
OGA
DYNC1I2
VAV1
GCDH
NSA2
GFM2
OTUD7B
MAD1L1
ERLIN2
MDM2
RAD54L2
RFFL
THEM4
ALDH3B1
PTPN7
PHLDB1
SLC35E2B
CYB5R4
ZFAND3
WDR18
CRACR2B
LFNG
PGPEP1
PSMD1
PEX14
RNF139
STX18
TSC22D4
OSM
PRDM10
PTP4A2
ARPC1B
ATP11B
ZNF350
BAG6
SLC25A18
CD63
SH3BGRL3
TRIP4
MFSD8
ABHD18
NUTF2
CENPT
GGPS1
ARID4B
PLD6
DUSP11
CDC42EP3
PA2G4
GIT2
EIF1AD
BANF1
SYT7
SH3RF3
IPO4
MTMR4
RPL22
SH2D3A
ANPEP
PNO1
LSM5
ST3GAL2
TRIM38
LNPEP
RAB20
SUSD1
CCDC130
TRIB1
UGP2
CXCR3
RBM7
C11orf71
GLUL
NMNAT1
LZIC
EMC8
COX4I1
SIDT2
PDPR
RASSF4
C7orf26
STRIP1
PHF12
CFLAR
DBP
CLDN12
THRA
ZNF503
RCOR3
ZNF775
TES
ZNF140
RIPK1
GBA
TMEM167B
ABT1
U2SURP
PGD
DPP8
NDRG1
PRELID3B
ATP5MF-PTCD1
ATP5MF
BSDC1
GHRL
CAST
ANAPC5
WT1
DDX23
AZIN1
LGALS9B
BCL3
DOK7
PKM
LPXN
ZNF609
DENND5B
SEPTIN2
HDLBP
USP36
EEA1
ETV6
PRXL2B
SIRPB2
RBP4
PROSER1
NHLRC3
RASSF5
REPIN1
ZNF862
SYK
NEK2
RAP2A
HIKESHI
INHBE
ZNF652
KDELR1
CCDC144A
CCDC146
ZNF577
DYSF
SLC25A16
USP8
CDKN2D
RPLP0
TMTC3
CEP290
CSRNP1
MIDEAS
POM121
HEXA
GTF2B
PEMT
SF3A3
RRAS
HMX3
LPAR2
CASP9
FAAP24
CEP89
LONP2
ABCC11
NUF2
MFSD10
SKA1
WASHC2A
QPCT
SLC41A3
GGH
SLC22A15
ARSG
SLC16A6
LAMP1
TFAM
EBAG9
DOK3
PLAUR
MRPS17
SIRT1
SLC3A2
NDUFAF3
DALRD3
PPP3CB
AMN1
HELZ
KBTBD6
OCIAD1
CYP1A1
ABHD2
RNF168
COQ10A
DRG2
FZD5
PRCC
SOD2
WTAP
MRPL4
CES1
C11orf24
CD164
MST1
IGF2BP3
ARMC1
NT5C2
PFN1
CD79A
USPL1
HMGB1
LYSMD2
PTRHD1
CENPO
ASS1
NHLRC4
ZNF318
PLBD2
COX19
C1RL
EIF4EBP1
ITGB2
ITPR2
PPARGC1B
SNRPB2
ACAT2
DDIT3
CDK17
SH2D4B
CCDC186
YTHDF2
UPP1
ZNF212
RNASEH1
PLEC
NUDCD1
SHLD2
GLUD1
N4BP2L1
PXYLP1
ARID2
CCDC90B
SH3TC1
EFCAB14
MTMR6
MFSD14A
DUSP14
SPOCK2
TPCN2
ZNF385A
TRIP6
THUMPD3
GGA1
SPI1
TMEM248
ZNF337
AIF1
CHD1L
POLD3
SMG8
TRAPPC10
DPH1
ANXA2
GALK2
COPS2
SCP2
RETN
VIRMA
NR2C2
ZFP1
RPP14
HTD2
DHCR7
ARID5A
SNAPC3
RFESD
FBXO31
MAP1LC3B
TRAK2
STRADB
SH2D3C
ARL8A
CCDC114
MAD2L1BP
SLC22A4
CD55
HEXIM1
ACSS2
MXI1
CAB39
PCCA
AQR
CLK2
ATP2A2
UNKL
UBE2Q2
DDIT4
P4HA1
FAR2
NEK6
NOLC1
NDUFB6
RPS12
ZCCHC3
PCTP
ADORA2A
CLUH
CYTH1
C2CD5
INTS6
CHI3L1
NBPF1
MACROH2A1
EDEM1
DHRS12
HECTD1
RPF2
RAB44
ATP23
TXNRD1
UNK
SAMD10
TUBA4B
TUBA4A
RALB
VPS50
HEPACAM2
LRRC25
NPAS1
CYP20A1
SLC25A36
SLC26A11
SGSH
MAST2
NUDT9
REL
ESYT2
GSTO1
SLC35C1
WDR48
SCN11A
KRR1
NOTCH2NLC
ITGAL
ZNF687
NRIP3
NPRL2
CYB561D2
TTC26
CLDND1
ARHGEF2
TMEM242
SCNM1
LYSMD1
ELOVL3
FOXD2
SEC61A1
SFMBT2
FNDC3B
STK38L
NIBAN2
PLK3
TRIM25
PACRGL
DCK
TUBGCP3
NR3C1
SLC24A1
INTS14
QTRT2
CCDC191
SDE2
TMA16
S100A9
DOC2B
CCNDBP1
BOD1L1
DCAF8
INTS10
MEPCE
USP35
KCTD21
SLCO4C1
THYN1
ACAD8
PIP4K2B
DYNC2I1
YES1
PIDD1
HIPK1
PLAC8
RBM28
PYROXD1
SLMAP
MDK
KIF21A
SRXN1
AKAP9
MC1R
ZNF3
CRLF3
KNSTRN
LMBR1
DCTN1
CITED2
IPO13
LOC100289561
UBALD1
ZNF335
RABL2B
RABL2A
MAPKAPK5
NME6
CACTIN
POLR3F
DZANK1
SUDS3
DYNC1LI2
NUP85
PSMG2
CEP76
VDAC2
HSPA9
EFTUD2
CCDC103
NVL
VTI1B
NUP205
RPL21
POLR2E
TBCK
AIMP1
NCLN
GOSR2
MRPS7
GGA3
C19orf48
ATP5MG
STAM2
EXOSC5
BCKDHA
REXO1
STAM
SRD5A1
SKP1
HADHB
HADHA
TSNAX
FARSB
SEC61B
ALG2
BLCAP
TSN
LYRM4
FARS2
UPF2
IRGQ
ZNF576
SLC35B1
PES1
ACTR10
PAK1IP1
C6orf52
CAPRIN1
DPH6
TTC8
PSMD12
COX7A2L
GOLGA5
SUPV3L1
VARS1
ISCU
RPS23
ATP6AP1L
TMED1
MRPS5
ZRANB2
IQCG
PI4KB
SMC2
ANAPC7
RPL35A
SART3
PDAP1
BUD31
EIF4ENIF1
PCBP1
SELENOF
HS2ST1
NEUROG2
USP1
ADK
AP3M1
ICE1
FAM104A
C17orf80
UFM1
RABGGTB
XPNPEP3
ST13
SF3B3
COG4
RPS27A
CLHC1
NEUROG3
OSGEP
APEX1
TM9SF1
COMMD1
CCT4
PAF1
HES1
PTGES2
DDX39B
UBE2I
RPS29
LRR1
PIN4
NDUFA10
VEZT
FGD6
ARHGAP11A-SCG5
ARHGAP11A
MRTO4
EMC1
TAF9
RAD17
AK6
PMAIP1
SUCLG1
HOXA4
ATOH1
NEUROG1
EIF2S3
SEC11C
RPL7
RDH10