ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748425 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◣ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

MIA2
NDUFS1
EEF1B2
PHF12
SKIV2L
NELFE
PPIP5K2
CSTF1
AURKA
CCDC107
RBKS
BABAM2
C11orf49
SCAF11
WDR74
SFRP5
NEK2
CCDC90B
MTRNR2L2
MTRNR2L8
WDR36
ATXN7L1
RTBDN
POLDIP3
CD2BP2
KNL1
RGPD2
RGPD1
CDC14B
U2SURP
RPS3A
RABGGTB
NR1I3
ZNF764
SNRPA
C19orf54
CEP152
IST1
ZSWIM3
ACOT8
IDH1
EIF1AD
BANF1
GFI1B
TSC1
RPS7
SH3D19
RPL27
RAB17
CD86
MRPL11
EPS15
FBXW5
C8G
PRR3
GNL1
POLRMT
ACY1
SYT7
MAP3K11
METTL7B
SNRPF
HRCT1
DSTYK
C1orf174
SASH1
PIKFYVE
TAOK3
RPL41
UROS
BCCIP
COQ5
ZNF383
DEAF1
GOLGA4
PPP1R37
CLCF1
ABLIM1
OCIAD2
FAM98B
TBCCD1
LARP1
SAMD1
FCHO2
RBM27
MAN2C1
ZNF564
BORCS7
OGT
MRPS28
USP37
CNOT9
PDAP1
BUD31
ZNF219
SNX16
PRKCSH
CCDC151
HNRNPH1
GUCA2A
ARPIN-AP3S2
ARPIN
MRPS30
NEURL2
CTSA
ATP5MC3
SH3D21
GOLGA8B
LBX2
STAT3
INTS12
GSTCD
PRAP1
KMT5A
ZKSCAN2
PIM3
RAD50
CHD1
CREB3L3
TNFRSF10B
C11orf86
TJP3
KPNA7
PAFAH2
KCNMB4
RPL12
LRSAM1
SNRPB
NUDCD1
SMARCD2
RAB11A
TMEM181
SHISA5
ARNT
SEC23A
TRIP12
FBXO36
KRTAP5-7
ATXN2
ZNF747
RAB34
GFM1
MMP15
RBIS
GDF15
ALG10B
EPB41L4B
RPGRIP1L
FTO
CCNI
PAQR4
PPP1R13L
MKRN3
MIA3
RPL34
ALG10
PSMA5
CMC1
RCAN1
ADPRHL1
SELENOP
PYY
NAGS
KDM5A
CCDC77
BAZ1B
RAD51AP1
C12orf4
RFX2
CENPN
TRIM15
DENND5B
GALK2
COPS2
CLASP1
SH3BP5L
WDR90
H4C3
TMEM143
SYNGR4
CCNL1
LHB
CALM2
MVP
EPS8L3
BIRC2
TTI1
RPRD1B
USP16
IGSF23
TDP2
ACOT13
ATF7-NPFF
ATF7
METTL25
CCDC59
TARS2
TATDN3
NSL1
AAR2
LRP1
ORC2
GAB1
PHF14
PABPN1
NFXL1
PPP6R1
IQCN
GPANK1
CSNK2B
ASF1B
NUP62
IL4I1
ATF5
HERC5
PRRG2
NOSIP
HYAL2
ETV4
PDE4C
EPS8
RBBP5
RPS29
PJA2
SLCO2B1
H4C11
SRSF11
LRRC40
MTFR2
VPS25
ISCA1
HEXIM1
LAMTOR5
NUCKS1
RAB11B
ZBTB48
ZNF165
DDA1
EIF4A2
PPP1R12B
SLC41A2
LAPTM4A
KATNB1
RPS6KA1
NQO2
GPR137
TINAGL1
SAXO2
EFL1
MAP4K5
ATL1
NUF2
MRPL30
MITD1
NFATC4
BANP
LGALS1
ATF4
SMG7
GRPEL2
INTS4
PARP2
PDE11A
VPS54
KDM3A
PIPOX
ZC3H12D
PRDM10
ZNF335
UBE2R2
NUP107
TBP
PSMB1
FBRS
POLG
OPA3
SHF
PSD
KIF16B
NOL8
CENPP
MMADHC
NR2F1
NCSTN
COPA
RMND1
ARMT1
GBF1
NR1D1
TRUB2
COQ4
GBA
GPR108
C12orf57
S100A16
TTI2
TMEM101
STK35
GCHFR
NME1
B4GALT4
PPP1R9B
TIAL1
GNAL
ZDHHC6
VTI1A
PAOX
PKP4
HNF1A
VIL1
HAAO
PDXP
PINK1
PANK1
SLC7A7
PCYT2
KIF21A
ACOX2
HADHB
HADHA
ZNF567
NRL
DCAF11
GPR35
MGST2
SLC19A3
AGMAT
ACY3
RAB37
SMG5
VAMP5
HNMT
PLEKHG6
ABCC6
AHCY
DHRS3
DENND2B
AJUBA
F10
AHSG
CYP17A1
COPS4
PUS10
PEX13
MMACHC
NR0B2
PPIL2
AQP11
APOB
TTC31
SUCLA2
SDCBP2
TMEM177
XYLB
LOC100129484
CBS
SCARB1
ANKS4B
SLC45A4
GDI2
TCIRG1
KLC4
TK1
AFMID
NDUFA6
BLOC1S5
EIF6
CCDC142
ZNF827
PERP
IQANK1
FAM83H
TMBIM1
ADAP1
HGD
FYB2
IL32
NID1
CYB5R3
ZNF232
MCRIP1
GSDMD
IFNGR1
SOS1
APOA1
MGAT1
MBNL2
HSPE1-MOB4
HSPE1
HSPD1
FASTKD1
CPPED1
MRPL2
ALKBH7
APOC3
GNG4
UBR4
PEPD
WNK4
PHACTR4
CFB
C9orf64
CDKN2AIP
TRIM14
F7
C1GALT1
ATP7B
ALG11
SEPTIN9
SMAGP
NEU4
DNMT3A
ZNF184
ABCD3
SH3BGRL2
C3
INHBE
QPRT
UBA6
CBY3
TM4SF5
PAK4
STX16
SMYD5
HSD17B11
ANXA9
SEC16B
CSNK1A1
MTIF2
ATXN7
TMCO1
DOK4
BLCAP
SARDH
MST1
RAB32
DIP2C-AS1
BRCA1
MYADM
PEX11G
PLXNB1
MTMR4
HMGCS1
BCL9L
TUBG1
RETREG3
AKAP1
SLC28A1
GIPC2
TRAF4
CIDEC
ZNF512B
AMACR
CRK
STARD7
SPATS2L
CCR6
VTA1
NMBR
SPATA2
SLC35A3
ISOC1
DNAJC22
JMJD1C
SPPL2A
MTRNR2L9
PAAF1
COA4
UBA5
SLC2A14
TANK
CLIC1
INTS9
HMBOX1
CACNB2
AGT
MSH5
PCGF5
TMEM140
FNIP1
KIFC3
MOGAT3
ZNF214
NLRP14
LCAT
MYO1A
ANKRD40CL
ASGR2
SOD2
VEGFA
SMLR1
VTN
C11orf24
ALDH3A2
TMEM150A
SCP2
POLR2H
MPND
DDC
IYD
SEH1L
OTULIN
ENTPD8
TACO1
CSRNP1
MYL12B
MOV10L1
STK24
PLXNB2
ETFA
CYP4F3
UGDH
GPT
SLC35D1
DRG2
CPHXL
CCDC93
SLC39A5
C1orf210
GALM
ZFYVE27
PGLYRP2
PGPEP1
MRPL20
ANK3
ST3GAL6
CDIP1
NIPSNAP1
GALK1
KRT8
TOGARAM1
KLHL28
GPHA2
GAMT
EHHADH
CAMSAP3
CHST13
C4BPB
TUBG2
CLDN4
GRB7
CRYGC
PRXL2A
SOAT2
ZNF444
COMT
FUT5
CCDC146
NRSN2
CMPK1
TJAP1
UMPS
RFPL2
STARD4
DDX19B
RCL1
ZNF696
SOCS5
LIN54
PKLR
WFDC3
DNTTIP1
ACSL5
RNPEP
CREBRF
PGAP3
ERBB2
SELENOI
C2
ADGRF3
ROCK2
TMEM139
GSTK1
MAF1
TMEM254
SDC1
NGEF
POLR3A
RAP1GAP
METTL8
DCAF17
TCAF1
TMEM256
TECR
DNAJB1
ADD3
NUFIP1
GPALPP1
PDLIM2
MAF
CEP43
ZNF57
LSM2
CDK5RAP1
MFN2
THNSL1
NPTN
SCNM1
LYSMD1
MLF2
HPS5
GTF2H1
PTK2B
PCGF2
LSM14A
PRR5
CLRN3
ZBTB8OS
RBBP4
RBP5
CCDC71
GLTPD2
MARK2
HINT2
BRIP1
CRNKL1
CFAP61
F2
TPT1
RSPH14
ASB9
FTCDNL1
CYCS
TNS3
TP53I3
RPS15
PALM3
RNF149
KCNAB2
NOSTRIN
FUT10
GFER
PPP1R3D
FAM217B
MYH7
CES1
BTBD19
ACAP3
SLC10A5
ZFAND2B
AMN
TMEM71
PHF20L1
STAT5B
SDHAF1
APOM
SLC22A3
VPS28
GRTP1
MLLT10
LEAP2
CYP8B1
DYRK2
TMEM202
TRMT2A
RANBP1
FEM1A
PYGL
PCK1
RBM33
RDH5
SLC36A1
IL7
PEF1
SEPSECS
AK3
SERPINA1
RNF19A
ASAH1
HPR
C2orf88
TREH
NGRN
TFR2
RIN3
SENP1
PFKM
MIEF1
CWC25
SAXO1
RRAGA
PALM2AKAP2
ACACB
FABP1
PWP1
ZSWIM8
SLC26A1
LRIG2
TF
AIG1
PRR13
ASGR1
BTNL8
ABCC2
POLR1H
HBP1
BPHL
ZNF343
CALML4
C19orf12
BAAT
CHCHD2
LOC110384692
C4B
C4B_2
C4A
RHBDD1
IRS1
AIFM2
APOC2
SURF4
STX18
MAP2K3
SLC31A1
FKBP15
ANKRD26
TIMMDC1
LGALS2
LINS1
ASB7
GRM4
ITPK1
ARL5A
FDX1
ORM2
TWF2
NFATC3
F12
POMGNT1
CD99
DECR2
AXL
UFL1
SLC22A18
HOXA3
FAM185A
DNAJC15
EPHX2
RWDD3
EIF4EBP3
SSTR1
SSUH2
TPRN
TFDP2
VCPIP1
EFNA1
C8orf44-SGK3
SLC2A4RG
STN1
SRSF4
ORM1
SORT1
RFFL
CLPB
NR2F2
DOK7
MRPL40
HIRA
ACSS2
CYP19A1
SLC22A9
ZFR
SLC30A1
RFX7
DCLRE1C
LTV1
DGKD
SLC22A7
CYB5A
ETV5
RAB30
APOBEC1
SYN3
WDFY3
ARMC5
AATK
CFLAR
GSTM4
NFE2L2
SLC38A10
LIME1
PHF7
CYP27A1
BAP1
MNAT1
NODAL
HEPH
VANGL1
ERF
ADGRG7
DHRS7B
ALG14
SCO2
C3orf86
YEATS4
PTS
IGF2BP2
PTPA
CRAT
ASPDH
HP
CXCL17
MRPL24
NRBF2
PDZK1
USP10
ACAT2
APOA2
GAB2
TMPRSS4
RBMS1
ZNF529
CHMP4B
CCDC68
EMP1
POT1
C11orf91
INVS
ERP44
FZD5
OSBP2
ESRRA
ACOT7
SMIM11B
SMIM11A
SERPINF1
SERPINC1
ZNF548
CLDN19
AMT
SLC51B
PYROXD1
BOLA1
MRPS24
ABAT
ENGASE
ARHGEF16
SERPIND1
N4BP2L1
COX16
MRPL44
PSMB3
GGCX
CDK11B
CDK11A
CX3CL1
MEP1A
FGFR4
ARSB
RREB1
LMO7
PROS1
ZNF384
DAO
PKP2
UGGT2
GSTO1
TLDC2
SECTM1
AGPAT1
SMG8
RBM42
ZNF230
POLD4
ATAT1
SULT1A4
SULT1A3
CLNS1A
NOP9
DHRS1
PLA2G12B
TECPR1
PLEKHJ1
C11orf52
SLC16A3
PRPF40A
TOMM70
LNP1
SUOX
MAIP1
CLUAP1
ZBED4
SLC25A16
IPO4
MSLN
H4C12
RNF31
PSME2
FAM136A
NSUN5
ACO1
TSKU
ATP5MF-PTCD1
ATP5MF
ATXN1
UTP14C
TRIM35
BSDC1
STK11IP
SHPK
CTNS
PTBP1
PACSIN2
VARS2
TCEA2
SH2D5
CNOT2
BDH1
SLC25A45
AASS
DLC1
TIA1
PARP4
MAOB
ZNF101
MAFG
GMPPA
CRADD
ACOT2
ZBTB4
POLR2A
MUC13
CRLS1
RNF5
GOLPH3
SEMA3B
CMTM8
PROZ
MTARC1
IL13RA1
SP5
RBP4
FITM2
SNX7
PCYT1A
SLC19A2
MIIP
TMEM19
KYNU
ALDH2
NOTCH2NLC
NPM2
NEDD8-MDP1
NEDD8
GMPR2
MAGI1
TOMM40
NAP1L4
MASP2
NR1H3
FBLN1
SUSD2
CRPPA
NAB1
MT1F
KIAA2013
DUSP18
IL11RA
EPHX1
EHBP1
NUP210
GMNN
SLC40A1
TYMSOS
TYMS
TMEM115
FOXJ3
LRRC29
CLSPN
SF1
PNPO
IFIT3
RHOBTB2
CNKSR3
ZNF225
TMCO2
IL1RN
IQGAP2
HDHD3
DLX2
GANAB
TSNAXIP1
RANBP10
BPIFB2
NOTCH2NLB
NOTCH2NLA
ECI1
PTGR2
PKIG
MYO7B
HNF4A
AP4S1
TMTC3
HLA-A
GLT8D1
CEP290
RSPRY1
N4BP2
LEKR1
IQSEC3