ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6957485 | HGrC1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◣ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

MAMDC2
DUX4
LOC102724770
DGCR6
SIRT1
LAPTM4B
LOXL1
TBC1D1
MAN1A2
INSYN2A
VAC14
LURAP1L
DLX3
NUP205
KLHL31
DHRS3
GRAMD2B
IL20
TGIF1
RBPJ
FRG2C
DIAPH3
TUBG1
RETREG3
GALNT11
PLN
PATJ
MTRNR2L1
TEX45
PEX11G
GP9
ITGB5
ALDH1B1
F2
LIMS1
RNF103
VKORC1
BCKDK
DIXDC1
SLC8A1
PRRG2
NOSIP
MCTP1
TOGARAM1
KLHL28
ZZZ3
SULT1C4
CMTM6
ARHGEF16
THEM4
HCAR3
HCAR1
AVEN
RASGRP3
H2BU1
H2AW
MMP20
C11orf91
TNFRSF10A
LRRC31
DISP1
RNF214
PCSK7
MUC3A
TNIP1
SNX16
CCPG1
C15orf65
FRG2
TMEM268
PIWIL4
PRR29
ICAM2
ZNF703
PPP3R1
METTL17
ZC3H3
GSDMD
ANKRD34B
FOXN3
CTCF
DERL3
LNX1
CD44
SERPINE2
E2F3
CCDC33
KCNN3
SERPINB8
SYNPO
HOXC9
HOXC10
TNFRSF12A
THOC6
HCFC1R1
CLDN9
CLDN6
ZNF76
IKZF5
ACADSB
AADAT
FAM172A
LMNA
PLCXD3
BET1
WDR74
STX5
MIS18BP1
C15orf39
MMP10
LIMK1
SNX25
CFAP97
GAB1
BCL10
TMEM263
FDFT1
ZNF609
MYO6
CORO2A
ME3
PLXDC2
RICTOR
FNIP2
MYADM
ASB8
REV3L
RAB12
SPATS2L
AMOTL2
TECR
DNAJB1
DTNA
PDLIM1
PRKCI
ZNF267
UBE2T
PPP1R12B
SLC38A9
CNOT1
NOTCH2NLC
NOTCH2
PANK2
CENPA
RRM2B
KCTD7
ECHDC3
XRN2
AHCYL1
COPS8
PDLIM7
ABLIM1
DNAJB4
CASZ1
MBD1
LRRC61
ACTR3C
ARHGAP22
TGM4
STMN3
RTEL1
PHLDB2
FLRT2
CPNE2
KTN1
KDSR
ARL13B
CDK5RAP2
PEDS1-UBE2V1
PEDS1
KMT2A
LOX
RPGR
RHOBTB2
LAMB3
GAD1
TLE2
MRPS16
DMAC1
SCD
RILP
RIC1
NAA80
IFRD2
HYAL3
BRAP
ACAD10
TAGLN2
SPTBN1
NDE1
MARF1
ZNF540
GNB2
ZNF571
HOATZ
BTG4
SRSF10
TMTC4
TTYH1
DSP
DAAM1
TENM3
NFKBIL1
DDX39B
ATP6V1G2
SKIL
PLS1
PHF19
BIN2
TVP23B
TDGF1
LRRC2
ABCC3
CAMK2A
ARSI
AVIL
C1QTNF7
CTNNB1
REN
AMPD1
MACO1
NOTCH2NLB
NOTCH2NLA
TNRC6B
FOXJ3
JCAD
RBMS2
UBAP1
FMN1
CABP7
SFXN2
ARL3
BIRC7
AGAP3
TMUB1
FASTK
GPR63
SEC62
ZNF764
TMEM123
ITPRIP
CRTC1
ENTPD6
FBXO46
RET
LNPEP
OTUD7B
ZMPSTE24
TMCO2
PSKH1
NRN1L
PELO
ITGA1
WDR36
ZNF148
ASPN
CSF3R
ANK2
TM4SF1
COL3A1
HSPH1
PRKAB2
CHD1L
FSTL3
TLR1
SCX
YPEL5
RAD23A
CALR
LRRC71
SERPINB2
NUP153
TPRN
SSNA1
ANAPC2
CSF2RB
BPTF
DGKD
UMODL1
NUMB
FSD1L
RFPL4B
NOL4L
ZNF285
TBC1D7-LOC100130357
TBC1D7
C2orf16
FRMD5
EPS15
RAB28
TRAPPC3L
CALHM4
TMED9
B4GALT7
PDS5B
ARHGAP10
ZNF592
UBR5
CLCN5
RBM27
ANK3
H2AZ2
ZNF217
PMEPA1
ART4
MOXD1
SPDYE1
MED23
CXADR
BRIX1
CDKN2AIP
KLF11
ASB5
COA7
STEAP2
STPG3
FAM166A
UBE2F
NELFB
CHRNA9
LENG8
PHYHD1
SERPINE1
DECR1
DSTYK
FBXO3
FAT4
SARAF
DOCK9
MSANTD1
BPGM
SETD6
SMARCD1
ASIC1
GAB2
SLC35F2
ANXA8L1
WRNIP1
MYLK4
BMPER
EPB41L1
EPB41
STK10
EFCAB9
TRAM1
TMEM229B
DCTN4
MACIR
MYL6B
SPATA9
RHOBTB3
ST3GAL2
LPCAT2
WARS2
FCHSD2
ETAA1
CPT2
DYRK2
H3C3
H1-2
ZRSR2
PITPNM2
PSMD2
DYRK4
ATP5IF1
SEC22B
H4C5
H3C4
H2BC7
H2AC7
ITPKC
COQ8B
SEC24B
TRIB1
TRA2B
NCAPH
NFAT5
WDR81
TLCD2
CBFB
COL7A1
BCAT1
KDM6B
VWA5B2
UHRF1
SLC2A14
UBIAD1
ART1
ZNF341
SHC4
CCDC200
SCAPER
SELENOF
HS2ST1
RNF212B
UCKL1
PDGFB
PAX6
CHST3
ID2
GPR1
MT2A
RNFT1
TUSC1
C1orf74
GTF2B
RPL3
ST3GAL4
USPL1
HMGB1
TMEM40
MTF2
MEF2D
PEMT
ERCC1
ID1
ZNF575
ETHE1
GOLGA5
LMO4
ZNF235
USP35
HMGB2
SIAH1
TTC39B
SLC25A25
SPRED2
RARA
NAIF1
P4HB
ARHGDIA
TBC1D16
SMG9
ACOX2
ARHGAP24
FAM110D
H2AZ1
DNAJB14
SMNDC1
SERTAD4
PRSS53
CRYAA
CRYAA2
XPO1
TYRP1
EPSTI1
GSDME
PTEN
KLLN
ZFR
CARD17
UBAC1
PDXK
DACH1
FHL2
CALM2
SLC2A2
RHOG
MADD
PINK1
FN1
LDHA
CDCA3
FBXO32
TFPI
ZNRF3
IL6
SLC39A13
SERINC2
MTIF2
RRM1
ZSWIM5
PIGX
CEP19
NDEL1
TCTEX1D4
PLK3
BTBD19
PLA2G10
MAFK
TMX4
FDXACB1
C11orf1
ALG9
GNAL
ZNF296
GEMIN7
CHMP1B
FBXL19
ZBED2
COMMD1
ZMYND11
GFOD1
SH3BP5
UTP18
MBTD1
LIMK2
TEAD4
SPATA5
NUDT6
ZCCHC4
NEURL4
CRHBP
ACAP1
C1orf100
LOXL2
ZBED6
TADA1
RABEP1
PTGIS
SP4
CABLES1
IGF2BP1
SYTL2
UBE2B
CDKL3
NPC1
XAF1
IFI35
SUCLG2
SAMD14
PDPR
LOXL3
DOK1
STRA6
FEM1A
NFIC
AURKAIP1
METTL11B
RAPGEF1
DCAF10
PUS10
PEX13
SMAD7
BRD7
CHIC2
TRIM2
AGBL2
CENPE
ZNF142
BCS1L
FAM118A
TMED8
SAMD15
USP30
MTRNR2L2
MSH3
DHFR
PITX2
ASIC3
MTRNR2L8
JUNB
HOOK2
ETS2
PROC
KIF5C
HTRA1
SLC7A5
SPACA6
NODAL
TRIM48
PRR14
FBRS
ZNF664-RFLNA
ZNF664
CCDC92
SMYD3
ID3
MRPL24
OLFM2
DNAJB2
WBP1L
SMAD3
AFAP1
NEURL1B
CST6
DNAJB5
TBC1D22A
ROR2
LAMC3
CLDN14
GIP
SNX9
LEFTY2
LTBP2
TRIOBP
TMEM95
KCTD11
HDGF
PPP1R13L
POLR1G
MTRNR2L9
LOC389199
ASS1
PMF1-BGLAP
PMF1
RNF213
BMPR2
JMJD1C
ASB6
GPR182
STAM2
YTHDF1
GID4
ATPAF2
BMF
FOSL2
THAP9
SEC31A
TMEM63A
LEFTY1
KCTD21
ARAP1
CGB5
TTI1
RPRD1B
ALOX5AP
TSKU
UVSSA
SMARCD3
TMEM242
UAP1
ZBTB38
MTHFD1L
HPS4
TOMM20
KPNA7
SSBP3
FPR3
B3GNT6
CAV1
CSRNP1
PLCXD2
PLAGL1
DDAH1
CCN1
TGFBI
PTPRB
CYP2B6
NPM3
FGF8
INPP4B
ITGAE
DENND2B
LAMC2
EP400
SNX18
KAT5
MYL10
ZMIZ1
FGF17
DMTN
MS4A10
MRPL2
KLC4
CUL7
CXCR5
AGO1
UNC45B
NLE1
JUND
ALDH18A1
TNK2
PLAU
KANK1
ITGB6
ANGPTL4
ANKLE2
WNT7B
GATM
ZNF212
CLCF1
ARL4D
STOX2
MYEOV
GATA4
EOMES
ACOX3
HOPX
OVCA2
USP2
CGB2
CGB1
NSMCE1
VPS28
NPFFR2
PTPRN2
CEP55
LAMA5
IVNS1ABP
FOXS1
CLIP3
CGB8
CGB7
BMPR1B
ITGA2
NTMT1
GLIS3
DVL1
ACLY
ARHGEF18
GAL
PKP1
UPK3BL2
SPDYE2B
SPDYE2
BEST3
TMPRSS11D
RAB11FIP3
LPCAT1
LTBP1
PSD3
MYBPH
CHI3L1
PF4V1
FST
CXCL1
DOCK2
BHLHE40
PCNX2
IGF1
CCDC24
S100A2
ARID3B
ALOX15B
CLTB
ITLN2
SLC35A4
APBB3
SREBF1
H4C9
H2BC11
H2AC11
MAP3K2
PLXND1
SIRPA
GNE
TAF12
HAUS7
KLHL5
BACE1
KLF10
DGAT2
OSGIN2
ELAPOR2
SMARCA5
ILKAP
C11orf42
CER1
CCDC88A
MYT1
MDFI
CREB3L2
WT1
PHC2
SLAIN1
AGFG2
KLF7
MTNR1A
GATAD1
IRF2BP1
ACP6
TMPRSS9
RFTN1
PLEK2
H2BC21
H2AC21
H2AC20
BEAN1
SLC39A4
NBL1
RHOF
IFT140
CRAMP1
MDN1
P3H2
DRAP1
C11orf68
MYOZ2
IFNA8
TTLL2
STK33
GRSF1
RHOD
PDE6A
GAS2L1
F2RL1
SLC6A15
NAV2
LUC7L2
GADD45B
FMC1-LUC7L2
FMC1
SDR9C7
MINPP1
RGS10
KCNJ18
APC
SLC1A1
ABR
UNC50
LOC100509620
COA5
BMP5
PDE4B
SFT2D3
RGPD8
RGPD5
ZG16B
GJB5
GJB4
ARMC9
CEP57L1
PEAK3
OAZ1
PPP1R15B
KLRD1
TMEM87B
MFNG
CDKN1A
SPON2
DSC3
RUNX1
MINDY3
HNRNPM
TBXAS1
UQCRHL
CHST11
ASB2
WDR54
POU2F3
C2orf81
SLC9A1
RNF223
C12orf42
B4GALT6
NOS1AP
HEXB
OSM
SOWAHC
SHISAL1
SEPTIN10
CELSR1
PIK3R6
KAT6A
FMN2
ATP13A2
PRKACB
IDO2
KRT36
KRT13
FOXP1
EAPP
ABTB2
NEDD4L
GCH1
KCTD1
HK2
AXL
ZNF792
EPG5
GSC
LAPTM5
MAP2K3
CTPS1
AKT2
TNPO1
SLAMF1
POU5F1
PGK1
NRCAM
NPR2
STK38L
NPAS4
KIFAP3
AXIN2
PRDM10
TUFT1
IL17B
SLC39A7
RXRB
RING1
OBSCN
HSD17B8
PIK3CD
AFAP1L1
FXYD6-FXYD2
FXYD6
CHN2
PRDM1
CDCA4
LOC100505841
GOLGA6C
ARMC7
MYOM3
CFLAR
SLC1A4
CDH26
PRDM14
NEDD4
CYP27C1
PPP6R1
SMIM35
SLC18A3
CHAT
SIK3
PRMT5
MCM7
AP4M1
CCNI
ANK1
IL17RD
GOLGA6A
AK3
SRP14
SLC36A2
FZD9
GPR183
NDST2
BORCS5
WWC2
GADD45G
AGPS
VWA3B
KANSL3
GOLGA6D
ETS1
ARL4A
PDE2A
ZSWIM4
AMPD3
AKIRIN2
DNMT3B
COMMD7
ZNF189
UBE2D3
PPP1CB
PIM1
MRPL50
BAAT
PARP6
KRT80
STX1A
KCNK9
VOPP1
SLC46A3
PAQR9
FGF1
NOTCH3
LRP5
BCL9L
TSN
NIFK
CNNM1
KIF2C
SPTAN1
MARCHF10
CREB5
ACSS3
EIF1AD
BANF1
ARHGAP39
RAB17
HBEGF
ZNF460
PLLP
BLOC1S2
LPCAT3
ZNF655
SRARP
HSPB7
FAM200A
CLCNKA
VDAC2
LRTM1
ITGB1
NCR1
AMHR2
ZNF720
RRAD
CIAO2B
CES2
CDH16
RCC1
PURA
KCNF1
GPR37L1
NKG7
LEMD3
ETFB
DUSP1
CLDND2
CD8A
SERHL2
IER3
FLOT1
EXT1
ZFP36L2
TACC2
RASL10A