ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064483 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◣ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PITX2
PMEPA1
NODAL
ZNF664-RFLNA
ZNF664
CCDC92
ETS2
SLC7A5
BMPER
CYP2B6
LAMC3
ID2
SMAD7
LEFTY2
NPM3
FGF8
CAV1
SNX9
PCNX2
PRKAB2
CHD1L
SNX18
ZNF148
SKIL
PLAGL1
COPS8
STOX2
SLC6A15
ARMC9
PMF1-BGLAP
PMF1
AGO1
ID1
TMEM63A
LEFTY1
PRR14
FBRS
POU5F1
DUX4
MTRNR2L2
MSH3
DHFR
NEURL1B
JUND
BMPR2
GAS2L1
ZFP36L2
RASL10A
SPACA6
TSPAN9
NPFFR2
WDR74
STX5
TEAD1
WNT3
RFPL4B
BCL11A
MRI1
ATG9B
EOMES
ALDH7A1
STAM2
SIRPA
MDN1
KLF10
FAM20C
OLFM2
DAB2IP
CEMIP
SMARCD1
ASIC1
SMAD3
TBC1D2
POU2F3
RNF213
KRT36
KRT13
NBL1
FAM178B
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
JUNB
HOOK2
PPP2R2A
SUPT6H
SDF2
SH3GL1
CHAF1A
CHST11
ZNF853
AHCYL2
FOXB1
ZSWIM4
UNC45B
NLE1
MUC3A
NPAS4
LARS2
RHOF
SETD1B
ETS1
BUD13
NOCT
SREBF1
ZSWIM7
TTC19
LRP6
RNF32
DPPA4
NOTCH3
KAT6A
IL17RD
FOXJ3
LDLRAD4
LRRC37A3
MARCHF3
ADAMTS5
MLLT11
CDC42SE1
WNT8A
EFNB2
DRAP1
C11orf68
GRIK2
PCED1B
AMIGO2
DNAJB8
MTIF2
GATA4
TAF13
FAM184A
CALD1
OCA2
GAD1
TULP4
MAP7
GALNT9
MARCHF5
CPEB3
TRIM56
PRAC2
HOXB13
CER1
NUF2
MTRNR2L1
MTRNR2L8
EP400
NEDD4L
GAB1
JMJD1C
CHD2
CCDC200
RPRM
LMLN2
CYB561
CD8A
DCAF10
DST
RCBTB2
CD101
ABLIM1
MTHFD1L
USPL1
HMGB1
PTGS2
ESRP1
ANKRD46
MCHR1
ATP9B
CCDC88A
MAMDC2
MRPL24
HDGF
UGT1A4
UGT1A3
MMP9
NSUN6
ARL5B
BAMBI
GNB2
PCK2
NRL
NOTCH2
RET
UTS2B
CCDC50
UAP1
EML1
RAPH1
LRRC59
ADAMTS1
WWC2
SNX14
PNMA1
TBC1D5
WT1
PLAAT4
TEAD4
PTPRN2
PLPPR3
AZU1
AFAP1
SMAP1
GNL2
MRPS36
DNAJC6
PMAIP1
ZNF609
PTPN18
PEAK3
OAZ1
ARL4A
SLC20A1
GRM1
E2F3
ZDHHC9
TGDS
HS3ST3B1
GPR180
SMIM8
GJB7
VANGL2
PCCA
NTM
ASNSD1
ASDURF
TBX22
BOD1L1
ERCC1
ID3
MIPOL1
PDE6D
MAML3
CYB561D1
COPS7B
ATXN7L2
FAM168A
HTR5A
RAB35
PRIMPOL
GIT1
CASP3
ANKRD13B
AFF1
TFAP2A
TRDMT1
HINT3
USP47
ZC3H7B
RANGAP1
NFIA
MICALL1
CBFA2T2
RCAN3
C3orf52
KANSL1L
JDP2
ZFYVE16
DGAT2
RGPD8
RGPD5
RGPD6
BAZ2A
LHB
CGB3
EPB41L4A
P2RY2
XKR7
WDFY1
PRAMEF17
KHK
EMILIN1
CDKN2C
SLCO5A1
RAB23
OR6J1
NCOA3
EPN1
CALN1
UBN2
ZNF521
USP15
KIF5C
LHX1
SAR1B
LHX5
IKZF5
ACADSB
PCDHAC1
FEM1C
CNOT3
FDXACB1
C11orf1
ALG9
ZNF775
TAF10
RRP8
MTDH
ILK
ASCC3
ROR2
LOC100287896
LIPT2
SIRT6
UBL5
PCYOX1
KDM5B
HPCAL4
FBXL12
C4orf36
LEMD3
SEC22A
ZNF511
TUBGCP2
SRF
LSM14A
CLN6
CBWD6
CBWD5
CBWD3
LMNA
SOWAHC
SEPTIN10
MARCHF4
PARL
TNFRSF13C
TLE1
SHISA8
NARF
MEX3A
FAM227B
DTWD1
CYBC1
BCL6
RNF103
TLCD5
MMP24OS
MMP24-AS1-EDEM2
EIF6
CREB5
SMPD4
MZT2B
MRPL39
IQSEC3
GGT7
AMOTL1
ACSS2
PDE4DIP
NRSN1
GTF2H2
GADD45G
TSPAN12
PXK
RNF11
PPT1
MMP8
IGF2BP3
FAM162A
CCDC58
KIF2C
REEP5
ZNF358
MEX3B
MCOLN1
FRG2
MTRNR2L9
RNF212B
FRA10AC1
SEC22B
XPO5
POLH
NCOA5
TTC39B
TNPO1
BCAP31
ABCD1
PRC1
TMEM121B
SYNJ1
REST
C9orf40
ADGRA1
LRP12
MAST4
CDH15
MNAT1
SLC44A1
TCEAL8
SLC4A9
RNF6
MFAP3L
AVPR1B
LPCAT3
NCOR2
IFT52
NTMT1
ZBTB45
SLC27A5
C9orf50
TMEM215
LRCH1
E2F2
CEP192
HMOX2
USP37
NMRAL1
ERLEC1
CPNE4
CNOT9
ASB3
ACSL3
MYO6
CTNNB1
OCIAD2
ZNF395
TBPL1
PPY
MRGPRG
LRAT
KLHL18
KIF9
ERI1
EHD4
EPB41L2
LEKR1
DCP1A
STX16
LRPAP1
CDKN2AIPNL
BCR
ZNF341
FAT1
ARHGAP28
ZNF839
UROC1
TPI1
SPSB2
OR8B3
EXOC2
CHST13
BAIAP2L2
TMEM250
STOML2
SLC25A12
PIGO
PICK1
CLPP
TCF7L1
PTGER2
PTBP2
POLE3
PDE1C
CEMIP2
C9orf43
AQP2
ALAD
AGO3
FOSL2
NAV2
PDE4B
HEXB
ROR1
GTF2H2C
GTF2H2C_2
EXD1
ERBIN
CHP1
CERCAM
ARHGAP26
PURA
MDC1
GLRA3
TUBB
OPN1LW
NFE2L3
EIF2B2
CCNH
AGL
BMF
ZDHHC23
TBCK
RTP3
RTN4
PPIH
LTF
GARS1
AIMP1
SLC1A1
CHN2
LPIN1
USP42
NTSR2
LOC728392
HTR1E
CRBN
CPVL
LAMC2
CXCR5
PCBP1
ZCWPW2
NUDT2
METAP2
KIF24
ERMP1
DDIT4
AZI2
WBP1L
MOB4
KIAA1841
GLS2
GBX2
ANKRD18A
ITGB1
PINK1
ZNF487
VCAN
HDAC2
FAM153B
CECR2
GADD45B
FABP6
TFAP2D
RWDD1
MRM3
IQGAP2
GRID2
GLOD4
EFHD1
CAMSAP2
TMEM132A
OR1E3
NGFR
KLF17
GRN
FAM171A2
C1GALT1C1L
ATP1A4
TNFRSF12A
THOC6
HCFC1R1
CLDN9
CLDN6
BHLHE40
BPTF
SOCS2
POLR3E
DESI2
AAR2
LAYN
TMEM170A
SHF
NCBP3
FCHO2
CFAP161
B3GLCT
ATP23
BRIX1
AK3
USP53
ZNF354A
ULK2
RFX4
PRMT9
IFNGR1
EIF4G1
MRPL2
KLC4
CUL7
ZNF654
ZFHX3
OXTR
DNAJC10
CGGBP1
FGF1
KIFC3
TXNL4A
TUT7
RNASE10
LIMK2
ZNF251
UCHL1
SIT1
RFESD
NPIPB9
MEIG1
FGF19
DCLRE1C
CCDC107
ARHGEF39
C12orf42
SLAMF1
UBA1
TTC9
SEC62
ELMO1
SDHA
OPRM1
NLGN1
MANEA
GGH
GDF7
FNBP1L
FCGR3A
CCDC127
VPS28
HBEGF
TEFM
PRKAA1
PRDM8
POLD1
NDRG2
HMGN2
GTF2A1L
FLOT2
DHRS13
BTC
ARHGEF40
AKAP12
RPGR
KBTBD2
GLIPR1L1
CAPS2
FXR1
STMN1
NXPE3
NIT2
MTARC2
GNAS
EPCAM
ARL6IP1
MED23
GTF3C3
C2orf66
SCOC
HABP4
XYLB
ST6GAL1
SLC24A1
GABRG3
PDLIM7
ZNHIT3
ZNF165
URM1
TDG
OSBP2
OR1F12
MDFIC
MAP2K1
INTU
HECTD1
CYP26B1
C12orf73
ANKK1
SLC9A1
BAIAP2
PIK3R3
SMIM10L1
SLC35E2B
PRH1-TAS2R14
PRH1
PDE8A
MTFR1
MKX
MAPK15
HEY2
CCDC166
SLC39A6
SLC16A2
RUBCN
LLPH
FYTTD1
FAM177A1
ELP2
CORO2B
UBE2B
CDKL3
CCNI
HSP90AB1
UBE2D2
PRDX1
CLTC
LHX2
ZNF48
ZNF641
CCNL1
ZNF227
PRUNE2
PET117
NR4A3
NEU1
MLLT6
KAT14
DMRTA1
CDC42EP3
KSR1
TMEM98
TBL1XR1
PABPC5
NMNAT2
LIG4
KATNA1
GNAI2
ABHD13
HERPUD2
XRRA1
UCHL5
SPCS2
SOX12
RO60
PROSER1
PDE8B
NUDCD3
NHLRC3
EYA3
CPLX2
GATAD2B
ZNF385A
RMDN2
TMEM242
TCTEX1D4
PLK3
BTBD19
USP22
ATAD2
PSMD8
PHTF1
NANOG
HIGD1A
CDK6
CCPG1
C15orf65
S100A2
GNAL
RBM15B
MANF
HES1
UBTF
TRIM65
TOR2A
STX18
SPAST
SOWAHA
RIPK4
PPARGC1A
PLEKHM3
PHIP
MRPL38
FYN
AKAP9
NOL4L
THAP4
KCNH5
ITGAV
TLCD3B
TEKT3
PARK7
KLHL23
DOC2A
C16orf92
ATG4B
IL20
CHIC2
FILIP1L
ZC3HAV1
TDRD9
SPEF2
RUSC2
NICN1
NAALAD2
IQCH
HEXIM2
FGFBP3
DNAJC19
ATP5MPL
ANKRD50
AMT
AAGAB
DHRS3
DET1
CCDC71L
TPD52
ZNF860
TRIM9
SPOP
SPATA13
OSBPL10
MUC21
MTMR6
FAM151B
EEF1AKMT4-ECE2
EEF1AKMT4
DEGS1
CYP2U1
C15orf40
BICD1
ALG3
TSPAN14
SIK2
SETD7
L1TD1
KIRREL1
HIVEP2
FAM98B
C8orf37
STK10
EFCAB9
OR2AT4
MTF2
NDUFS3
KBTBD4
FAM180B
FAM120B
DLL1
BORCS6
KTN1
TAF12
MSX2
RNF224
RNF208
CYSRT1
SLC34A3
NPIPB6
NAT8L
MAP3K4
FAM107A
ELK4
EBAG9
CALB1
KDM6B
TIPARP
CDC37L1
MBOAT2
SYN2
SCAF11
ZNF772
ZNF419
TGFA
SPAG5
RSKR
NFKBIA
METTL9
INKA1
GPC6
GALNT15
FAM221A
CDHR4
BLMH
AFF4
CALM2
MAP3K2
TMEM37
PAK1
HNRNPR
HCN1
ARIH1
AMPH
PRMT5
MCM7
AP4M1
ZWILCH
SNAPC5
SKA3
RPL4
PLCH1
NRSN2
MRPL57
LRRC37B
KCNQ3
HTR7
GOLGA6L7
CRYBG1
AFG3L2
AMOTL2
MKRN2OS
MKRN2
FAM222B
THOC2
SST
SOCS3
MYO1D
MND1
FUT8
DLX6
CRYM
COL23A1
BCL9L
DSTYK
SFRP2
MUC12
MSRB2
GAREM1
ANKRD12
PLCL2
TRIAP1
TMEM202
RTKN2
REEP6
PCSK4
KCNH1
CTSL
COX6A1
ARL8B
RBPJ
ZC3H6
WNT5A
MPZL1
DNAJC3
ASAP3
AP3B1
ADAMTS3
FOXN3
RAD54L2
TPTEP2-CSNK1E
TMX3
SLC7A8
SLC30A5
PLAAT1
PHACTR2
METTL2B
INTS12
HIPK1
HECTD3
GSTCD
CYP2R1
CCDC102B
AMFR
TMEM263
GAD2
ALK
SSBP2
SYDE2
RCBTB1
PKN2
GEMIN4
BEST4
DCP1B
SLC35E1
BAZ2B
TMEM267
TJP3
SERPING1
POT1
NKX1-1
GNG3
CNTNAP3
CFHR4
CEP78
BSCL2
TGIF1
ANKRD18B
STK32C
SLC35G1
RPTOR
LRRC27
IZUMO1
FUT1
FGF21
EPHA1
CNTN1
CDX2
C9orf85
BAZ1A
SMYD3
CALM1
STEAP3
RYR1
RASGRP4
NAA40
MEF2A
ARL5A
ADAMTS18
YAF2
UAP1L1
TATDN1
SUMF2
SLC2A9
SAPCD2
NDUFB9
NCKAP1
MAN1B1
EXD2
CDKN2A
MAT2A
ADRA1B
TFAP2B
OAZ3
MS4A1
FERMT2
CNTN4
CARNMT1
TCF12
HNRNPD
PAWR
TTLL7
TRMT6
TEX10
RIMBP2
PTPN4
MCM8