ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064492 | hESC derived mesendodermal cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◣ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PITX2
ROR2
GID4
ATPAF2
SMAD7
SLC7A5
MRPL24
HDGF
SSBP3
FGF17
DMTN
SMARCD3
ETS2
CEP55
TSKU
PMEPA1
CCDC24
SLC35A4
APBB3
BMPER
ELAPOR2
SMARCA5
AGFG2
RAB11FIP3
DIAPH3
APC
USP2
PPP1R15B
TMEM87B
TCTEX1D4
PLK3
BTBD19
AFAP1
LOC389199
MINDY3
HNRNPM
ZMIZ1
PIK3R6
IDO2
ZNF792
EPG5
GSC
AKT2
FXYD6-FXYD2
FXYD6
ARMC7
CFLAR
PRDM14
TMEM63A
LEFTY1
GATA4
EPSTI1
SLC36A2
GPR183
VWA3B
CNNM1
ACSS3
LRTM1
NCR1
KCNF1
NKG7
ETFB
CLDND2
SERHL2
RFPL4B
ACOX3
BCL11B
MYOM1
SLC1A1
HS3ST1
LEFTY2
GJB3
LAMC3
AXIN2
WT1
UQCRHL
CSRNP1
ID3
GREB1
WDR54
C2orf81
ZNF664-RFLNA
ZNF664
CCDC92
FOXI1
C2orf74
DACT2
DENND2B
H2BW2
CER1
SNRPF
NODAL
CLIP2
ALOX5AP
TOMM20
EOMES
IGF1R
TNFSF14
EFHD2
ID1
LAPTM4B
NEURL1B
MTRNR2L8
RAB33A
AIFM1
AKAP13
SAXO2
EFL1
BEX3
OVCA2
SLC5A3
MRPS6
HIC1
ADGRG7
C13orf42
FAF2
UMODL1
SRL
ITLN2
TMEM272
DUX4
MTRNR2L2
MSH3
DHFR
TP53TG5
PIP4K2C
APOLD1
SPOCK3
APOA4
YARS1
S100PBP
MAMDC2
SETBP1
ARHGEF4
ANKDD1A
NPFFR2
ZNF558
WDR74
STX5
NTN1
ZAP70
SOX21
DGAT2
PTPRM
ANGPT2
TTF1
CFAP77
MYT1
ADGRF2
TTC39B
WDR44
HOXD13
EVX2
RAB17
GAD2
CST6
EIF1AD
BANF1
RAI1
MARS1
ARHGAP9
TMEM86A
TMEM185A
MTRNR2L1
NEBL
ARHGAP39
LBR
L3HYPDH
JKAMP
ZNF683
CDHR3
CAPN14
TVP23C
OPN5
COPS8
NDRG4
ATP6V1B2
CELA3B
ZNF296
GEMIN7
SPDYE14
SPDYE10P
RUNX1T1
SEMA3E
MYO7B
DECR1
NUAK1
GRSF1
BEAN1
AGPAT3
SYNDIG1L
PAX4
KIF5C
SLC6A1
FOXN4
PDE2A
PIP5K1B
PDZRN3
ALK
PRR5L
XPO6
DUSP5
OSCP1
MXD4
MRPS15
ROR1
SLC3A2
TDGF1
LRRC2
NBL1
MIXL1
SACM1L
OR6V1
CELA3A
WDR31
ARF1
SMAD3
BMPR2
ZNF587B
PLPP4
MRPL22
IL6ST
GEMIN5
UBA1
TCEA2
SOX18
RANGRF
GNA13
RXRG
GPR19
ID2
DNAJB2
SNX9
FLVCR2
DET1
TVP23B
DUS2
DPEP2NB
DDX28
PLAGL1
SRGAP2
HSD17B14
MDC1
RNF19A
FOXA2
EPHB2
SLC26A7
SMARCD1
ASIC1
APOL3
RP1
LPGAT1
CDK14
TLE2
SPINT2
CRYBA2
PTCHD1
PKHD1L1
HABP2
NRCAM
NDUFB4
CST5
SLC8A1
SPATA19
PAQR9
TBC1D14
CYTH1
BRD7
CUEDC1
CCDC192
IL17RA
CLIP4
CKM
ARID5B
MDN1
GCNT1
FNBP4
TRIOBP
CAV1
IQCJ-SCHIP1
IQCJ
SUOX
SMAD2
IKZF4
CFAP410
AKR1B15
CALN1
ZBTB40
LGR5
SMYD3
ANK2
IL17RD
SPTAN1
ADAP2
ADPGK
ZNF169
NANP
ACSM4
IFIT3
MST1
MRPS25
HOXA2
HOXA1
HNRNPD
ZBTB18
CERS4
TRIM48
NDST2
EML1
PRND
ZNF608
TRMT112
RRBP1
PRDX5
DDR2
CPE
SLC34A2
CTXND1
AASDH
S100A10
RNASE9
CD8A
ADAMTS18
VIPR2
PAPOLB
ALG14
VANGL1
SAMD5
PPFIBP2
IFNLR1
FGF5
AKIP1
POU2F3
FGF1
MCAM
ATXN7L3B
WDR25
WARS1
CSNK1A1L
FILIP1L
UBAP2
MTRNR2L6
CMSS1
CIZ1
MECOM
CCRL2
DHRS3
ARL4D
IRF2BP1
TCP11L1
PPRC1
NQO2
NOG
APOBEC3D
APOBEC3C
ST3GAL1
SPACA3
PBX2
MSMB
GPSM3
AGER
TLN2
CASTOR2
ABHD4
ITGB6
TEN1
BLOC1S6
ACOX1
KRT36
KRT13
PHLDB2
OTX2
MN1
ARSG
MYCL
CFC1
TRIP10
RBP5
GPR108
CLSTN3
PCK2
NRL
FAM168A
TMEM225
MVB12A
FGFR4
C12orf43
BST2
USP53
FAM71A
BDH1
SIRPA
ZNF732
ITGB5
GPT2
HNF4A
APOBEC3F
JUND
SLC24A2
RIPOR2
CDC42EP1
RPS3A
DCBLD2
CHL1
CCDC60
EPB41L4A
SH3BGR
SALL4
LCA5L
MTHFD1L
MADD
KIT
APOBEC3G
ANKFN1
ETS1
RPS6KA2
AIRE
NOD1
NAA60
PCED1B
AMIGO2
PPP1R21
FAM104B
TAGLN2
ARHGAP28
STING1
KCNIP4
SNX18
STK40
SMAP1
UPB1
PIK3CG
NPM3
FGF8
UNC50
COA5
RPRM
ZBTB8OS
TBCA
RBBP4
RADIL
IGFBPL1
CYP4B1
AFF3
TNRC6B
STK33
GUCA2A
SKAP1
FYB2
ABCB11
MYC
SFXN1
GREM2
FOXO3
APLP2
GJB5
GJB4
TBX3
PSKH2
PHACTR1
JAG2
GPR37
SORCS2
NAIP
DUSP29
STAG1
PIPOX
PARD3
OCLN
ANKFY1
FMN2
NUF2
ZNF831
ZIC2
GSTT2B
GSTT2
EHHADH
DDT
BAG3
CCDC200
OR51M1
GPHB5
SBF1
TP53INP1
RAB40A
BOD1L2
AGPS
ZNF610
OTUB2
DCSTAMP
CTF1
BCL7C
NTMT1
HEXB
CCNG1
SFRP1
SERINC3
PTAFR
PKIG
C8B
INPP4B
HRK
ATL2
UACA
LIFR
FBXO34
ZNF592
SMIM8
GJB7
VIRMA
UFSP1
MAP9
KRAS
ARHGEF2
ACHE
SOAT1
HACD2
FLNB
PHC2
SLAMF1
ZBTB25
ZBTB1
TRAPPC4
SLC37A4
RPS25
CHD2
PARL
MRGPRX1
DTNB
CEBPB
TSN
NIFK
NT5DC4
GNG10
FARP1
GAS2L1
SOWAHC
SEPTIN10
TOMM34
TIAM1
LOXL4
IL12B
CLDN24
CLDN22
CELF1
WIPI1
PTGR1
ABLIM1
ANKRD18B
ZSCAN22
NUMA1
MAGI3
LRTOMT
LRIG3
ELMO1
TMEM14B
DDTL
ADGB
SPRR1B
MAB21L4
CROCC2
SYNPO2L
MYOZ1
KCNJ1
ATF3
PLLP
VDAC1
TNC
METTL24
ERGIC1
CRYGB
CDC14A
TSPAN13
FGFR2
ADM
MTRNR2L9
KCTD1
ZSWIM3
SOX2
HROB
ACOT8
FDXACB1
C11orf1
ALG9
BCAR3
TMCC3
MACC1
ZNF540
METTL11B
DST
SCOC
SNTB1
PKP4
PARP11
ODF4
CCDC148
ZNF148
CCNI
CYP19A1
ACOXL
TPM1
RTRAF
ESR1
CES3
PAQR5
TNRC6C
PRR14
FBRS
CCDC182
TALDO1
MYO16
GPR161
CFC1B
TRIM2
ADAMTS8
ZNHIT3
RTL10
PLCG2
MYSM1
GNB1L
IVNS1ABP
BCL9L
FAM237B
SUCLG1
LOC107986453
TIMM23
PGPEP1
NDUFB7
GSTA1
FZD8
MUC20
RBM8A
PELI1
ZNF396
TMEM14A
RRP15
SPACA6
MSX2
ASF1A
SEC22A
NDST4
MILR1
LPIN3
HNRNPA2B1
CBX3
MATN3
CASP7
C5orf63
UNC80
TMEM233
JAM2
GBP4
ENPEP
DICER1
STAM2
SLC43A3
RNF130
DDX58
CNDP2
SELENOT
PRKX
FAM83F
CLTA
RAD54L2
TMEM244
EPHB3
DDX47
RNF224
RNF208
CYSRT1
TFRC
LYPD6B
KALRN
TRIB1
LHX1
SMAP2
PKIB
MCF2L2
ENTPD4
UNC45B
NLE1
NEDD4L
RDH13
MGAM2
EPS8L1
CHIA
CPT2
ZNF438
PRAG1
TIPARP
SGK3
CDH8
COG1
DAAM1
PRDM1
KREMEN2
CLDN18
RGS5
XCL2
CUL4A
SLITRK2
CRTAM
CYP2A6
IQCF2
PLAUR
IQCF5
PTCD1
CPSF4
ZNF76
MCTP2
KLHL4
PTPRD
MYBPH
CHI3L1
SLC25A51
GRM3
GLRA3
NIPBL
ZNF740
CSAD
RASSF10
PKDCC
LOC102724770
DGCR6
SKIL
FRG2C
PRKAB2
CHD1L
MUC3A
TBC1D1
SIRT1
BIRC7
LURAP1L
VKORC1
BCKDK
SERPINE1
CRTC1
MAN1A2
SNX16
RBPJ
TGIF1
FRG2
TUBG1
RETREG3
IL20
KLHL31
ASIC3
MMP20
F2
GP9
H2BU1
H2AW
TNIP1
JUNB
HOOK2
AVEN
TEX45
PEX11G
NOTCH2NLC
COL7A1
RNF103
NUP205
DLX3
PDLIM7
PROC
LIMS1
CD44
ERCC1
NOTCH2
LMNA
SULT1C4
SERPINE2
DIXDC1
KDM6B
USP35
NOTCH2NLB
NOTCH2NLA
PATJ
HTRA1
LOXL1
SYNPO
GRAMD2B
TMEM268
VAC14
DMAC1
PLN
AGAP3
TMUB1
FASTK
GAD1
ALDH1B1
ZC3H3
GSDMD
DISP1
LRRC61
ACTR3C
TNFRSF12A
THOC6
HCFC1R1
CLDN9
CLDN6
LAMB3
ASPN
FSTL3
GAB1
C11orf91
DTNA
ANKRD34B
UBAP1
SMG9
MYO6
PDGFB
GALNT11
OLFM2
ZNF703
MIS18BP1
CASZ1
RPGR
NDE1
MARF1
RASGRP3
RNF214
PCSK7
MTIF2
HOXC9
HOXC10
ARHGAP22
WBP1L
CMTM6
THEM4
ZNF285
IKZF5
ACADSB
ME3
PRRG2
NOSIP
DNAJB5
TBC1D22A
PPP3R1
TNFRSF10A
ARHGEF16
PDXK
HCAR3
HCAR1
CLDN14
STRA6
UBE2T
PPP1R12B
GIP
PEDS1-UBE2V1
PEDS1
ECHDC3
PRR29
ICAM2
C15orf39
ART1
FNIP2
RAB12
BCL10
TOGARAM1
KLHL28
YPEL5
INSYN2A
EPB41L1
OTUD7B
LTBP2
TGM4
TMEM95
KCTD11
PPP1R13L
POLR1G
AADAT
RICTOR
METTL17
ASS1
PMF1-BGLAP
PMF1
REN
LRRC31
RNF213
FOXN3
PRKCI
CCPG1
C15orf65
GPR63
H4C5
H3C4
H2BC7
H2AC7
JMJD1C
ASB6
C1QTNF7
MYADM
PAX6
TYRP1
GPR182
FAM172A
CDK5RAP2
ZNF267
YTHDF1
NFKBIL1
DDX39B
ATP6V1G2
LIMK1
BMF
FMN1
FOSL2
THAP9
SEC31A
ART4
KCTD21
CHIC2
KTN1
ARAP1
BCAT1
PDLIM1
DACH1
SCAPER
CGB5
MCTP1
TTI1
RPRD1B
CCDC33
UVSSA
TRA2B
ASB5
TMEM229B
PITPNM2
MMP10
CENPA
FRMD5
CTCF
PSMD2
TMEM242
PLCXD3
UAP1
TMEM263
ZBTB38
SCD
PIWIL4
HPS4
GNB2
DSP
KPNA7
SLC25A25
RBM27
PELO
ITGA1
SNX25
CFAP97
AMPD1
GPR1
EPB41
FPR3
B3GNT6
TLR1
PLCXD2
EPS15
DDAH1
CORO2A
CCN1
STMN3
RTEL1
ACOX2
TGFBI
PTPRB
KDSR
CYP2B6
CHRNA9
TM4SF1
FHL2
KCNN3
AMOTL2
SPATS2L
XRN2
SPRED2
CALM2
ITGAE
BIN2
LAMC2
ZNF341
EP400
FLRT2
LRRC71
KAT5
MYL10
ENTPD6
ZNF571
RARA
COA7
MS4A10
SERPINB2
ITPKC
COQ8B
RILP
DYRK4
DERL3
MOXD1
PLS1
LNX1