ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6957482 | KGN
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◣ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

MAMDC2
DUX4
MTRNR2L1
MTRNR2L2
MSH3
DHFR
RBPJ
LOC102724770
DGCR6
MTRNR2L8
SIRT1
KCNJ16
FRG2C
LAPTM4B
DSP
TRIM48
LURAP1L
NDE1
MARF1
GP9
MMP20
TUBG1
RETREG3
DLX3
FRG2
MTRNR2L9
MUC3A
TBC1D1
PLA2G10
KTN1
DIXDC1
NUP205
VOPP1
RNF103
MIS18BP1
DHRS3
LRRC61
ACTR3C
ZNF750
LIMS1
PRKCI
GPR1
GAD1
SNX16
UBE2T
PPP1R12B
CENPA
AVEN
TTC39B
ALOX15B
LOXL1
ITGB5
GAB1
RICTOR
WBP1L
SYNPO
IL20
TMEM242
PATJ
LNX1
TGIF1
ZNF285
RNF214
PCSK7
METTL17
THAP9
SEC31A
OSGIN2
STMN3
RTEL1
PLN
SPON2
THEM4
FMN1
ST3GAL4
HCAR3
HCAR1
WDR36
CTCF
TRABD2A
DCTN4
MACO1
TMEM268
CMTM6
CD44
PPP3R1
IKZF5
ACADSB
ME3
TLK1
C11orf91
LRRC31
DTNA
THRB
PCDH18
ZNF267
UCK2
USP35
SHC4
TOGARAM1
KLHL28
TYRP1
TNIP1
RGS10
SLC25A25
NAIF1
PF4V1
CXCL1
ARHGAP22
ZC3H3
GSDMD
TGM4
KDSR
TUSC1
RAB28
F2
TECR
DNAJB1
MS4A10
KLHL5
CEP57L1
AMOTL2
SULT1C4
RASA3
INSYN2A
SMAD7
PMEPA1
SKIL
PRKAB2
CHD1L
PITX2
BIRC7
COPS8
WDR74
STX5
VKORC1
BCKDK
SERPINE1
CRTC1
MAN1A2
ID2
KLHL31
ASIC3
ZNF148
H2BU1
H2AW
JUNB
HOOK2
ETS2
TEX45
PEX11G
NOTCH2NLC
COL7A1
PDLIM7
PROC
ERCC1
DIAPH3
NOTCH2
LMNA
KIF5C
BMPER
SERPINE2
KDM6B
NOTCH2NLB
NOTCH2NLA
HTRA1
SLC7A5
SPACA6
GRAMD2B
VAC14
ID1
DMAC1
AGAP3
NODAL
TMUB1
FASTK
ALDH1B1
PRR14
FBRS
DISP1
ZNF664-RFLNA
ZNF664
CCDC92
SMYD3
TNFRSF12A
THOC6
HCFC1R1
CLDN9
CLDN6
LAMB3
ASPN
ID3
MRPL24
SLC8A1
FSTL3
TRIB1
PHLDB2
ANKRD34B
UBAP1
SMG9
MYO6
PDGFB
GALNT11
OLFM2
ZNF703
DNAJB2
CASZ1
RPGR
RASGRP3
MTIF2
HOXC9
HOXC10
ZNF76
SMAD3
AFAP1
NEURL1B
CST6
PRRG2
NOSIP
DNAJB5
TBC1D22A
CCDC200
ROR2
TNFRSF10A
LAMC3
ARHGEF16
PDXK
CLDN14
STRA6
GIP
PEDS1-UBE2V1
PEDS1
ECHDC3
TLE2
PRR29
ICAM2
C15orf39
ART1
FNIP2
ABLIM1
RAB12
BCL10
UMODL1
SNX9
YPEL5
BRD7
ANK2
LEFTY2
EPB41L1
OTUD7B
LTBP2
TRIOBP
TMEM95
KCTD11
HDGF
PPP1R13L
POLR1G
AADAT
LOC389199
ASS1
PMF1-BGLAP
PMF1
REN
RNF213
FOXN3
CCPG1
C15orf65
GPR63
H4C5
H3C4
H2BC7
H2AC7
BMPR2
JMJD1C
ASB6
RFPL4B
C1QTNF7
MYADM
PAX6
GPR182
FAM172A
CDK5RAP2
STAM2
YTHDF1
NFKBIL1
DDX39B
ATP6V1G2
LIMK1
GID4
ATPAF2
BMF
FOSL2
TRIM2
TMEM63A
LEFTY1
ART4
KCTD21
CHIC2
ARAP1
BCAT1
PDLIM1
DACH1
TDGF1
LRRC2
SCAPER
CGB5
MCTP1
TTI1
RPRD1B
ALOX5AP
CCDC33
TSKU
UVSSA
TRA2B
ASB5
TMEM229B
SMARCD3
PITPNM2
MMP10
FRMD5
TAGLN2
ZNF540
PSMD2
PLCXD3
UAP1
TMEM263
ZBTB38
MTHFD1L
SCD
PIWIL4
HPS4
GNB2
TNRC6B
TOMM20
KPNA7
SSBP3
RBM27
PELO
ITGA1
SNX25
CFAP97
TCTEX1D4
PLK3
BTBD19
FDXACB1
C11orf1
AMPD1
ALG9
EPB41
FPR3
B3GNT6
CAV1
TLR1
CSRNP1
PLCXD2
EPS15
PLAGL1
DDAH1
CORO2A
CCN1
ACOX2
TGFBI
PTPRB
CYP2B6
CHRNA9
NPM3
FGF8
INPP4B
TM4SF1
FHL2
KCNN3
SMARCD1
ASIC1
SPATS2L
XRN2
SPRED2
CALM2
ITGAE
DENND2B
BIN2
LAMC2
ZNF341
EP400
SNX18
FLRT2
LRRC71
KAT5
MYL10
ZMIZ1
ENTPD6
FGF17
DMTN
ZNF571
RARA
COA7
SERPINB2
ITPKC
DAAM1
COQ8B
RILP
DYRK4
DERL3
MOXD1
PLS1
MRPL2
KLC4
CUL7
CXCR5
AGO1
FBXO32
UNC45B
RIC1
NLE1
JUND
ALDH18A1
TNK2
PLAU
KANK1
ABCC3
ITGB6
ANGPTL4
ANKLE2
WNT7B
GATM
ZNF212
CLCF1
ARL4D
STOX2
KCTD7
GAB2
MYEOV
HOATZ
GATA4
BTG4
ZNF592
EOMES
ACOX3
SYTL2
TMTC4
HOPX
RRM1
OVCA2
USP2
CGB2
CGB1
NUP153
TFPI
NSMCE1
VPS28
NPFFR2
PTPRN2
CEP55
EPSTI1
LAMA5
E2F3
IVNS1ABP
FOXS1
FDFT1
CLIP3
CGB8
CGB7
BMPR1B
ITGA2
HMGB2
NTMT1
SARAF
GLIS3
DVL1
ACLY
ZMPSTE24
TMCO2
ARHGEF18
GAL
C1orf100
PKP1
UPK3BL2
SPDYE2B
SPDYE2
BEST3
TMPRSS11D
SLC2A2
RAB11FIP3
LPCAT1
BRAP
ACAD10
NOL4L
LTBP1
CAMK2A
ARSI
PSD3
MYBPH
CHI3L1
TVP23B
FST
DOCK2
CABP7
UBR5
LPCAT2
BHLHE40
SPDYE1
PCNX2
IGF1
NFIC
CCDC24
S100A2
SERTAD4
MRPS16
ARID3B
CLTB
ITLN2
SLC39A13
SLC35A4
APBB3
SREBF1
H4C9
H2BC11
H2AC11
SIAH1
MAP3K2
BET1
PLXND1
SIRPA
GNE
TAF12
HAUS7
WARS2
CHST3
LOXL2
BACE1
KLF10
DGAT2
DCAF10
ZBED6
ELAPOR2
TPRN
SSNA1
ANAPC2
SMARCA5
PRSS53
ILKAP
C11orf42
SLC35F2
CER1
CCDC88A
ZFR
UTP18
MYT1
MBTD1
ZSWIM5
MDFI
CREB3L2
WT1
PHC2
CPT2
AHCYL1
SLAIN1
AGFG2
KLF7
MTNR1A
GATAD1
SRSF10
IRF2BP1
MAFK
FAM118A
CTNNB1
USP30
ACP6
TMPRSS9
CPNE2
PSKH1
NRN1L
RFTN1
CRYAA
CRYAA2
PLEK2
MBD1
H2BC21
H2AC21
H2AC20
BEAN1
SLC39A4
NBL1
VWA5B2
RHOF
IFT140
CRAMP1
ZNRF3
FBXO3
MDN1
DECR1
ZNF609
P3H2
FAT4
DRAP1
C11orf68
ANK3
MYOZ2
IFNA8
TTLL2
NUMB
ITPRIP
STK33
GRSF1
SERPINB8
RHOD
PDE6A
GAS2L1
F2RL1
SLC6A15
NAV2
LUC7L2
LIMK2
GADD45B
FMC1-LUC7L2
FMC1
SDR9C7
MINPP1
KCNJ18
APC
SLC1A1
DNAJB4
ABR
UNC50
LOC100509620
COA5
BPGM
BMP5
PDE4B
SFT2D3
RGPD8
RGPD5
KMT2A
ZG16B
GJB5
GJB4
CSF2RB
STEAP2
SCX
ARMC9
PANK2
PEAK3
OAZ1
PPP1R15B
KLRD1
TMEM87B
MFNG
METTL11B
CDKN1A
SERINC2
DSC3
RUNX1
MACIR
CNOT1
BRIX1
MINDY3
HNRNPM
TBXAS1
SP4
UQCRHL
CHST11
ASB2
WDR54
POU2F3
C2orf81
SLC9A1
RNF223
C12orf42
CDKN2AIP
B4GALT6
NOS1AP
HEXB
OSM
SOWAHC
SHISAL1
SEPTIN10
CELSR1
PIK3R6
KAT6A
FMN2
ATP13A2
PRKACB
IDO2
KRT36
KRT13
FOXP1
EAPP
ABTB2
NEDD4L
GCH1
H2AZ1
DNAJB14
KCTD1
HK2
AXL
ANXA8L1
ZNF792
EPG5
GSC
LAPTM5
MAP2K3
P4HB
CTPS1
ARHGDIA
AKT2
TNPO1
SLAMF1
POU5F1
PGK1
NRCAM
NPR2
CARD17
STK38L
NPAS4
KIFAP3
AXIN2
PRDM10
MYL6B
TUFT1
PHF19
IL17B
STK10
SLC39A7
RXRB
RING1
OBSCN
HSD17B8
EFCAB9
PIK3CD
FSD1L
AFAP1L1
PLXDC2
UBE2B
FXYD6-FXYD2
FXYD6
CHN2
CDKL3
PRDM1
CDCA4
PTGIS
LOC100505841
GOLGA6C
ARMC7
MYOM3
CFLAR
SLC1A4
CDH26
PRDM14
NEDD4
LENG8
CYP27C1
PPP6R1
SMIM35
SLC18A3
CHAT
TMED8
SIK3
SAMD15
PRMT5
MCM7
AP4M1
ZZZ3
SPTBN1
ZNF575
ETHE1
CCNI
ANK1
TRAPPC3L
CALHM4
IL17RD
IFI35
TBC1D7-LOC100130357
TBC1D7
SPATA9
RHOBTB3
CSF3R
GOLGA6A
AK3
SRP14
SLC36A2
ASB8
FZD9
ARHGAP24
GPR183
NDST2
BORCS5
WWC2
LOX
GADD45G
ATP5IF1
AGPS
VWA3B
KANSL3
GOLGA6D
ETS1
C1orf74
ARL4A
UHRF1
PDE2A
ZSWIM4
AMPD3
AKIRIN2
DNMT3B
COMMD7
ZNF189
ZBED2
UBE2D3
PPP1CB
PIM1
MRPL50
BAAT
PARP6
KRT80
FCHSD2
STX1A
KCNK9
SLC46A3
PAQR9
CABLES1
USPL1
TADA1
HMGB1
FGF1
NOTCH3
LRP5
BCL9L
TSN
NIFK
CXADR
CNNM1
KIF2C
SPTAN1
MARCHF10
CREB5
FOXJ3
ACSS3
EIF1AD
C2orf16
BANF1
ARHGAP39
RAB17
JCAD
HBEGF
ZNF460
PLLP
BLOC1S2
LPCAT3
COMMD1
ZNF655
SRARP
HSPB7
FAM200A
CLCNKA
VDAC2
LRTM1
ITGB1
NCR1
AMHR2
ZNF720
RRAD
PHYHD1
CIAO2B
CES2
CDH16
RCC1
PURA
KCNF1
GPR37L1
DYRK2
NKG7
LEMD3
ETFB
DUSP1
CLDND2
CD8A
SERHL2
IER3
FLOT1
EXT1
ZFP36L2
TACC2
RASL10A
PCED1B
NSMCE4A
KRTAP21-3
HNRNPA2B1
CBX3
AMIGO2
LRP12
HSP90AB1
MSX2
PRRT2
PAGR1
OSBPL9
MVP
MAZ
ARL13B
MATN2
FSCN1
SLC2A14
COL16A1
SUCLG2
LRP6
UQCRB
TSPAN9
NOCT
KANK4
GTF2B
ETAA1
EGR3
PRRT1B
FAM170B
BCL11B
FBXL7
UPK3BL1
TSPAN12
TMEM40
IL6
LRRC37A3
ANGPTL3
VPS36
POU2F2
MAP3K9
CKAP2
PALD1
AQP3
SAT1
LDHAL6B
KLF4
FRMD4A
FAT1
EML1
TEAD1
MRGBP
CALD1
NDEL1
MYOM1
HMGA1
H4C14
H4C12
H4C11
H3C3
H3C15
H3C14
H2AC19
H2AC18
H1-2
NEK6
EPB42
SETD6
ROR1
LHB
CGB3
TEX46
KDM1A
IGFBP7
GNA12
ZC3H6
YARS1
TENM3
S100PBP
RRNAD1
NUF2
ISG20L2
CLDN4
SPRR1B
PRND
PANX1
HS3ST1
GAD2
FILIP1L
CD2AP
WNT3
RPRM
PAPLN
LBH
GJB3
CMYA5
MLLT11
MAPK13
CDC42SE1
ASF1A
PFKP
NUP214
NAA80
IFRD2
HYAL3
UGT1A4
UGT1A3
TCF12
S100A10
BCL11A
ARSB
SGK1
RAD9A
MRI1
BAMBI
REV3L
PCK2
NRL
GNAL