ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702097 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◣ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

TAF12
EAPP
GSK3B
TRPC1
DNAJA1
APTX
H3C3
H1-2
TEDDM1
GLUL
MAMDC2
CLSPN
KIF2C
MCL1
H4C3
H1-6
KANK1
KMT2E
MYLIP
SPTAN1
H4C12
H4C11
H2BC14
H2AC14
SKP1
COQ10B
FAM53C
CDC25C
C6orf62
SETD5
IFRD1
LRCH4
FBXO24
H2BC15
H2AC15
ID4
KLF7
SRSF7
EIF2AK3
HNRNPA2B1
CBX3
SRSF3
PRKRA
PJVK
HNRNPH1
NASP
ZCWPW1
PPP1R35
MEPCE
S100A1
S100A13
CHTOP
JUN
DDX59
ANKRD17
SLC25A25
KIF27
SREK1
SLC39A10
ARL15
ARF4
ISCA1
DENND6A
H4C5
H3C4
H2BC7
H2AC7
KDM4A
FAM168B
MRPL35
IMMT
TTI2
H3C6
H2BC8
H2AC8
H1-3
HSP90AB1
PFKFB3
SLC35B2
IER5L
EEF1A1
SLC9A1
FEM1C
H2AZ1
DNAJB14
H4C14
H3C15
H3C14
H2AC19
H2AC18
SECISBP2
POLR3D
CKS2
DDX1
ZFAND5
HSPA1B
H3C12
H2BC17
H2AC17
MTHFD2
ACTB
ZC3H6
SARAF
AFF1
ZBTB37
TGOLN2
PRDX1
RPL5
SMIM14
TRA2B
CTNNB1
RPS20
POMZP3
PABPC1
H4C15
TRA2A
NDRG1
NAGK
ACTL6A
MAK16
KPNA1
CENPC
DDAH1
CCN1
SESN2
NFYC
TM2D1
PPIA
CCN2
UBR4
H2BC5
H1-4
UBE2D3
H4C2
H3C2
H2AC4
YWHAQ
NABP1
HSPA5
IER5
WDR1
PTPN14
H4C9
H2BC11
H2AC11
CAMSAP2
ZNF326
SFPQ
SLC16A1
H2BC12
H2AC12
USP48
HDAC4
DUSP1
PPIL3
NIF3L1
CAP1
CCNG1
ZNF644
PPP1R10
MRPS18B
ATAT1
DNAJC25-GNG10
DNAJC25
CNN3
TUFT1
TSC22D2
EIF4A2
UFL1
TAF8
CCND3
RPS12
ZSCAN31
ID2
MAP3K2
RHOB
SLC20A1
VCP
SLIT2
FANCG
FAM3C
CELSR3
DNAJB5
H2BC21
H2AC21
H2AC20
TMEM18
MAT2A
FER
FSCN1
TMSB10
POR
PITRM1
CYP20A1
BAZ2B
SDCBP
RPS27
RAB13
PDE7A
NR4A2
HNRNPDL
ENOPH1
NREP
TMEM242
RPL12
LRSAM1
FAM200B
UAP1
GPATCH3
UBAP2
H4C13
H3C11
H2AC16
H1-5
GPN2
RCC1
MMADHC
DCAF8
ASH2L
MATR3
USO1
POLR2J3
RPS6
CALM2
GPR15
EPM2A
CLDND1
THUMPD3
STK17A
STPG3
FAM166A
TUBB4B
GADD45G
AKIRIN2
ATXN7
PLK2
ELMOD2
LBH
STT3B
PLK4
MYNN
ACTRT3
TARDBP
GTPBP8
CACYBP
AMOTL2
RNF220
RPN1
FXR1
TOR1AIP2
TOR1AIP1
RFX3
RABGEF1
ZBTB5
THAP5
NFKBIZ
DNAJB9
SERTAD2
RMI1
HNRNPK
BZW1
HERPUD2
PIK3R3
BCLAF1
H4C4
GORASP2
MKLN1
FN1
AZIN1
TRMO
H2BC6
ATG10
SRRM1
PPP2CA
PCBP1
USP40
FILIP1L
TENT5C
OR2T1
UBTD2
ITGAV
H2BC4
H2AC6
LATS1
DUX4
MTRNR2L1
SMAD7
PMEPA1
LOC102724770
DGCR6
SKIL
FRG2C
PRKAB2
CHD1L
LAPTM4B
MUC3A
TBC1D1
MTRNR2L2
MSH3
DHFR
SIRT1
PITX2
BIRC7
COPS8
DHRS3
LURAP1L
WDR74
STX5
VKORC1
BCKDK
SERPINE1
CRTC1
MAN1A2
SNX16
RBPJ
TGIF1
FRG2
TUBG1
RETREG3
IL20
KLHL31
ASIC3
MMP20
ZNF148
F2
ITGB5
MTRNR2L8
GP9
H2BU1
H2AW
TNIP1
JUNB
HOOK2
AVEN
ETS2
TEX45
PEX11G
NOTCH2NLC
COL7A1
RNF103
NUP205
DLX3
PDLIM7
PROC
LIMS1
CD44
ERCC1
DIAPH3
NOTCH2
LMNA
SULT1C4
KIF5C
BMPER
SERPINE2
DIXDC1
KDM6B
USP35
NOTCH2NLB
NOTCH2NLA
PATJ
HTRA1
LOXL1
SLC7A5
SPACA6
SYNPO
GRAMD2B
TMEM268
VAC14
ID1
DMAC1
PLN
AGAP3
NODAL
TMUB1
FASTK
GAD1
ALDH1B1
TRIM48
ZC3H3
GSDMD
PRR14
FBRS
DISP1
ZNF664-RFLNA
ZNF664
CCDC92
SMYD3
LRRC61
ACTR3C
TNFRSF12A
THOC6
HCFC1R1
CLDN9
CLDN6
LAMB3
ASPN
ID3
MRPL24
SLC8A1
FSTL3
GAB1
C11orf91
TRIB1
DTNA
PHLDB2
ANKRD34B
UBAP1
SMG9
MYO6
PDGFB
TTC39B
GALNT11
OLFM2
ZNF703
MIS18BP1
DNAJB2
CASZ1
RPGR
NDE1
MARF1
RASGRP3
RNF214
PCSK7
MTIF2
HOXC9
HOXC10
ZNF76
ARHGAP22
WBP1L
SMAD3
AFAP1
CMTM6
THEM4
NEURL1B
ZNF285
IKZF5
ACADSB
CST6
ME3
PRRG2
NOSIP
TBC1D22A
CCDC200
ROR2
PPP3R1
TNFRSF10A
LAMC3
ARHGEF16
PDXK
HCAR3
HCAR1
CLDN14
STRA6
UBE2T
PPP1R12B
GIP
PEDS1-UBE2V1
PEDS1
ECHDC3
TLE2
PRR29
ICAM2
C15orf39
ART1
FNIP2
ABLIM1
RAB12
BCL10
TOGARAM1
KLHL28
UMODL1
SNX9
YPEL5
BRD7
ANK2
LEFTY2
INSYN2A
EPB41L1
OTUD7B
LTBP2
TGM4
TRIOBP
TMEM95
KCTD11
HDGF
PPP1R13L
POLR1G
AADAT
MTRNR2L9
LOC389199
RICTOR
METTL17
ASS1
PMF1-BGLAP
PMF1
REN
LRRC31
RNF213
FOXN3
PRKCI
CCPG1
C15orf65
GPR63
BMPR2
JMJD1C
ASB6
RFPL4B
C1QTNF7
MYADM
PAX6
TYRP1
GPR182
FAM172A
CDK5RAP2
STAM2
ZNF267
YTHDF1
NFKBIL1
DDX39B
ATP6V1G2
LIMK1
GID4
ATPAF2
BMF
FMN1
FOSL2
TRIM2
THAP9
SEC31A
TMEM63A
LEFTY1
ART4
KCTD21
CHIC2
KTN1
ARAP1
BCAT1
PDLIM1
DACH1
TDGF1
LRRC2
SCAPER
CGB5
MCTP1
TTI1
RPRD1B
ALOX5AP
CCDC33
TSKU
UVSSA
ASB5
TMEM229B
SMARCD3
PITPNM2
MMP10
CENPA
FRMD5
TAGLN2
CTCF
ZNF540
PSMD2
PLCXD3
TMEM263
ZBTB38
MTHFD1L
SCD
PIWIL4
HPS4
GNB2
TNRC6B
DSP
TOMM20
KPNA7
SSBP3
RBM27
PELO
ITGA1
SNX25
CFAP97
TCTEX1D4
PLK3
BTBD19
FDXACB1
C11orf1
AMPD1
ALG9
GPR1
EPB41
FPR3
B3GNT6
CAV1
TLR1
CSRNP1
PLCXD2
EPS15
PLAGL1
CORO2A
STMN3
RTEL1
ACOX2
TGFBI
PTPRB
KDSR
CYP2B6
CHRNA9
NPM3
FGF8
INPP4B
TM4SF1
FHL2
KCNN3
SMARCD1
ASIC1
SPATS2L
XRN2
SPRED2
ITGAE
DENND2B
BIN2
LAMC2
ZNF341
EP400
SNX18
FLRT2
LRRC71
KAT5
MYL10
ZMIZ1
ENTPD6
FGF17
DMTN
ZNF571
RARA
COA7
MS4A10
SERPINB2
ITPKC
DAAM1
COQ8B
RILP
DYRK4
DERL3
MOXD1
PLS1
LNX1
MRPL2
KLC4
CUL7
CXCR5
PLA2G10
AGO1
FBXO32
UNC45B
RIC1
NLE1
JUND
ALDH18A1
TNK2
PLAU
ABCC3
ST3GAL4
ITGB6
ANGPTL4
ANKLE2
WNT7B
GATM
ZNF212
CLCF1
ARL4D
STOX2
TECR
DNAJB1
MACO1
KCTD7
GAB2
MYEOV
HOATZ
GATA4
BTG4
ZNF592
EOMES
ACOX3
SYTL2
TMTC4
HOPX
RRM1
OVCA2
USP2
CGB2
CGB1
NUP153
TFPI
NSMCE1
VPS28
NPFFR2
PTPRN2
CEP55
EPSTI1
LAMA5
E2F3
IVNS1ABP
FOXS1
FDFT1
CLIP3
CGB8
CGB7
BMPR1B
ITGA2
HMGB2
NTMT1
GLIS3
DVL1
ACLY
ZMPSTE24
TMCO2
ARHGEF18
GAL
C1orf100
PKP1
UPK3BL2
SPDYE2B
SPDYE2
BEST3
TMPRSS11D
NAIF1
DCTN4
SLC2A2
RAB11FIP3
LPCAT1
BRAP
ACAD10
NOL4L
LTBP1
CAMK2A
ARSI
PSD3
MYBPH
CHI3L1
TVP23B
PF4V1
FST
CXCL1
DOCK2
CABP7
UBR5
LPCAT2
BHLHE40
SPDYE1
PCNX2
IGF1
NFIC
CCDC24
S100A2
SERTAD4
MRPS16
ARID3B
ALOX15B
CLTB
ITLN2
SLC39A13
SLC35A4
APBB3
WDR36
SREBF1
SIAH1
BET1
PLXND1
SIRPA
GNE
HAUS7
WARS2
CHST3
LOXL2
KLHL5
BACE1
KLF10
DGAT2
DCAF10
ZBED6
OSGIN2
ELAPOR2
TPRN
SSNA1
ANAPC2
SMARCA5
PRSS53
ILKAP
C11orf42
SLC35F2
CER1
CCDC88A
ZFR
UTP18
MYT1
MBTD1
ZSWIM5
MDFI
CREB3L2
WT1
PHC2
CPT2
AHCYL1
SLAIN1
RAB28
AGFG2
MTNR1A
GATAD1
SRSF10
IRF2BP1
MAFK
FAM118A
USP30
ACP6
TMPRSS9
CPNE2
PSKH1
NRN1L
RFTN1
CRYAA
CRYAA2
PLEK2
MBD1
BEAN1
SLC39A4
NBL1
VWA5B2
RHOF
IFT140
CRAMP1
ZNRF3
FBXO3
MDN1
DECR1
ZNF609
P3H2
FAT4
DRAP1
C11orf68
ANK3
MYOZ2
IFNA8
TTLL2
NUMB
ITPRIP
STK33
GRSF1
SERPINB8
RHOD
PDE6A
GAS2L1
F2RL1
SLC6A15
NAV2
LUC7L2
LIMK2
GADD45B
FMC1-LUC7L2
FMC1
SDR9C7
MINPP1
RGS10
KCNJ18
APC
SLC1A1
DNAJB4
ABR
UNC50
LOC100509620
COA5
BPGM
BMP5
PDE4B
SFT2D3
RGPD8
RGPD5
KMT2A
ZG16B
GJB5
GJB4
CSF2RB
STEAP2
SCX
ARMC9
CEP57L1
PANK2
PEAK3
OAZ1
PPP1R15B
KLRD1
TMEM87B
MFNG
METTL11B
CDKN1A
SPON2
SERINC2
DSC3
RUNX1
MACIR
CNOT1
BRIX1
MINDY3
HNRNPM
TBXAS1
SP4
UQCRHL
CHST11
ASB2
WDR54
POU2F3
C2orf81
RNF223
C12orf42
CDKN2AIP
B4GALT6
NOS1AP
HEXB
OSM
SOWAHC
SHISAL1
SEPTIN10
CELSR1
PIK3R6
KAT6A
FMN2
ATP13A2
PRKACB
IDO2
KRT36
KRT13
FOXP1
ABTB2
NEDD4L
GCH1
KCTD1
HK2
AXL
ANXA8L1
ZNF792
EPG5
GSC
LAPTM5
MAP2K3
P4HB
CTPS1
ARHGDIA
AKT2
TNPO1
SLAMF1
POU5F1
PGK1
NRCAM
NPR2
CARD17
STK38L
NPAS4
KIFAP3
AXIN2
PRDM10
MYL6B
PHF19
IL17B
STK10
SLC39A7
RXRB
RING1
OBSCN
HSD17B8
EFCAB9
PIK3CD
FSD1L
AFAP1L1
PLXDC2
UBE2B
FXYD6-FXYD2
FXYD6
CHN2
CDKL3
PRDM1
CDCA4
PTGIS
LOC100505841
GOLGA6C
ARMC7
MYOM3
CFLAR
SLC1A4
CDH26
PRDM14
NEDD4
LENG8
CYP27C1
PPP6R1
SMIM35
SLC18A3
CHAT
TMED8
SIK3
SAMD15
PRMT5
MCM7