ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3401281 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX3401278: MCF-7

◣ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

TRIM48
DUX4
MTRNR2L1
MUC3A
BMP7
COL23A1
PARD6B
SNX16
CCDC200
CSF3R
RRBP1
GREB1
FRG2
SLC45A4
TXNRD1
SGK3
MIDEAS
BAALC
PLA2G4E
HSFX3
EOLA1
ARID3B
HEXA
PMF1-BGLAP
PMF1
WASHC2A
MTRNR2L2
MSH3
DHFR
ERCC1
LAMP1
MTRNR2L8
WASHC2C
AP5Z1
PDGFB
FRG2C
ENTPD4
PRICKLE1
RAE1
SLC4A2
CDK5
SUSD4
MYCL
SHLD2
GLUD1
TM2D2
ADAM9
RALGDS
STAU2
SPATA25
NEURL2
CTSA
UBE3C
MEF2C
TNC
KCNMA1
PASD1
SUMO3
SH3GL1
CHAF1A
GET4
ANKS6
MAGEB10
HM13
DAZAP1
MIER1
SLK
ADGRB3
CLCN7
FGGY
ALG6
MAMDC2
TNNC2
SNX21
MEOX1
SUMO2
SCAMP5
PTBP1
ADAM23
ST7
OTUD7A
KAT5
ARHGAP32
ARID5B
COMMD9
SMARCA4
MACC1
FLYWCH1
BLOC1S4
NPEPPS
STRA6
ACVR1B
TBL1X
SBK1
AP2A2
NSD1
IGLL5
TFDP1
TMCC3
SKIL
GRHL1
PRKCA
SFXN1
RABGAP1L
CORO7
CLSTN1
NR5A2
NSF
EFNA3
SAP30
ANGPTL4
CBX7
FBXL3
ZNF668
SEC22B
MINDY2
CHD7
SMYD1
FASN
UBE2E2
CACNA2D2
SPTAN1
MRPL45
GRIN2D
PLEKHF2
IRF2BP2
SUMF1
NDUFA4
SLC1A7
KDM7A
WBP1L
CELA3B
ZBTB7B
ACTN4
PPP5D1
CALM3
DTNB
PHF21A
CFAP206
CUTC
COX15
NOXO1
GFER
C17orf58
PRKCE
MSS51
KDR
FCHSD2
NFASC
PATZ1
C1QTNF1
MKLN1
IKZF2
AUTS2
PHIP
DIP2A
PTP4A3
IGF1R
PCIF1
LASP1
WDR74
APP
SYNPO
UBXN2A
TEX46
KDM1A
TMEM40
USF2
UPF1
ATXN7L3
CHIC2
TGIF1
OAZ1
ADCY9
CLN3
APOBR
PTPRG
LYPLAL1
APBB2
TRIL
ATP6V0D1
AGRP
PPARGC1A
NGB
LCOR
ETV4
SEPTIN9
BSG
SCGB3A1
LYPLA1
CABIN1
MELK
ZBTB14
ZNF217
IFT140
CRAMP1
CCDC88A
TMEM266
SLC25A11
RNF167
PALLD
MYEOV
PVALEF
AATK
SRSF6
ARHGAP25
SLC35A5
SCYL3
B3GALT5
ATG3
PYCR1
TRMO
PEAK1
HMG20A
USP28
GADD45A
GAB2
EIF4H
MRFAP1
GNB1
PKNOX1
ZBTB18
RYK
TMCC2
THEMIS2
CTBP1
STAT5B
LIFR
PTBP3
MLLT10
FBXL5
NUDT3
TMEM91
CD82
B4GALT2
MDM2
SMURF1
CBX6
C3orf70
FEZ1
NEK6
MAST2
LIMA1
TMEM216
ATOH7
ARPC2
SPRTN
EXOC8
DNPEP
TMEM239
C20orf141
PWP2
LOC102724159
PPP2R5A
ANKZF1
NF2
NFIB
SLC8A3
RABEP1
SUPT7L
SLC4A1AP
RMND1
ARMT1
SNX19
SLC6A6
FBXL22
APBB1
AMMECR1
KLHL41
AVEN
RBKS
BABAM2
BTBD3
NAGPA
EXOC6
HHAT
AMOTL1
ARSG
TENT2
PRMT3
MRGBP
LFNG
RRAGC
ACACA
THAP1
LAMA3
TCTA
RHOA
OPRL1
LKAAEAR1
RALGPS2
CDCA7L
P4HB
SNX12
MYOG
RGPD2
RGPD1
TMEM120B
FHL2
SPNS1
PMM1
UBAP2L
GPSM1
C1orf43
ASF1B
YEATS2
RNF152
PXN
FZR1
UBXN4
SGPL1
ZC3H7A
SULF1
C1orf198
DOK7
DENND2B
PTPRF
WWP1
VGLL4
SIAH1
TAOK1
ARRDC3
THAP12
GVQW3
AFAP1
NCOA5
UBE2E3
MAZ
ZNF787
MTRNR2L9
LGALS8
GBA
BAX
HAGH
FAHD1
ATP6V0B
ZNF507
PAPSS1
CALML5
PHC2
DUSP6
BCL3
PCBP4
NSD2
MTHFR
CLCN6
UBE2Q1
PSMA1
UXS1
AMDHD2
CHST12
NEURL1
VPS33A
RUFY1
PER1
HP1BP3
TBC1D5
MCOLN1
TSPAN7
SINHCAF
TNRC6B
TCAF2
SYNCRIP
LGALSL
TSGA10
MTMR3
FRMPD1
MRFAP1L1
UPP1
TCF7L2
SEMA3D
LIMK1
UNC45B
GPAT4
DLL3
SRCIN1
FZD3
FBXO16
IFNLR1
C12orf66
BCL2L1
GNA13
SCML1
CPEB2
LARP1
CLIP1
HSP90AA1
ATF3
TADA2A
SPEN
RBM14-RBM4
RBM14
C15orf61
THUMPD2
PRKAG2
PTK2
UBTF
PDE4DIP
MPP6
MAPK8IP1
LUC7L2
FMC1-LUC7L2
FMC1
POLR2J3
APOC1
VSTM2L
OSTF1
NMRK1
ABCA5
LOC114841035
FKBP2
SSBP4
IFI44L
RXRA
HHIPL2
PDIK1L
C10orf95
TNNT1
KLF16
PDS5B
USP2
MAP3K2
ITPK1
ARHGAP28
NBPF6
MCM9
FREM1
ROCK2
CYB5R1
RGS3
HES1
INKA2
ZAR1L
TNFSF15
LTBP4
BRCA2
DCK
GRAMD4
GNB4
DGKZ
MYL5
MAP4K3
ATP5ME
FOXB2
TRMT2A
RANBP1
CDON
HNRNPU
PPP4R2
BRD4
LRRC20
BAIAP2
THOP1
SGTA
EPHA2
TP53BP2
SPRED2
REST
DENND1A
ASPH
DHX15
FAM81A
GRM3
PRUNE2
NELFCD
SYNPO2L
HNRNPH2
GLA
DLGAP4
PAIP2
MYBPC2
TCHH
HIF1A
ATXN2L
CDRT4
CTNNA2
CDKL5
ATXN7L2
TMCC1
DTNA
ATP6V1G1
MAP4K1
EIF3K
BMI1
SKIDA1
PRR7
PDE3B
SPCS3
EZR
FSCN1
CNOT8
BAHCC1
TNK2
MARCHF9
CDK4
METTL9
STBD1
SPAAR
HRCT1
PRKAG3
LARP4B
YTHDF2
RUVBL1
EEFSEC
SPAST
SFR1
MAK16
IGFBP6
CXCL8
RAD9A
VOPP1
MAPT
TARBP1
LRIG3
ACTC1
IQSEC1
PPP6R2
LRRC47
SMARCB1
NNAT
FGF6
BLCAP
BCAT1
UNKL
CEP162
LPIN2
OPN3
CHML
C9orf40
HOXC13
APOA1
RRP1
ZZZ3
MUSK
ABHD2
DAPK1
CHEK1
MADD
NPAS4
SUZ12
MYO1D
POLE4
ITSN2
SRSF4
DGLUCY
ARHGEF12
RGMB
RAB6A
WDR45B
JMJD1C
KIF1C
KANSL3
INCA1
FER1L5
NEO1
CRYGN
NFRKB
CSNK2A3
INO80C
SLC12A3
PCID2
CUL4A
CCN2
FAM168B
EXOC7
BRD3
MXRA7
LCORL
SYNJ2
RDH5
ITGA7
BLOC1S1
TMEM167B
ATP2B1
ZNF236
MTCL1
ITGB3BP
EFCAB7
EBAG9
ADARB1
PXT1
KCTD20
GTF2I
CAPZA2
ABCC10
XRCC5
SLX4
PTAR1
PPM1A
NDUFV2
LTBP1
ARID5A
EFNA4
RBPJ
NES
LMNB1
SPATS2
DIPK2A
QRICH1
KSR1
CHD1
HDGF
ANKRD29
RARG
MEF2D
IFNAR2
GFRA1
ANKRD26
LHFPL1
SH3PXD2A
RARA
MFSD1
CRTC1
COMMD3-BMI1
COMMD3
NKIRAS1
EVPL
PPP2R3B
TNNI1
SSH1
IKBIP
APAF1
CREB5
HERC5
ZNF718
ZNF595
SRSF11
SF3B1
LRRC40
KLHL8
KLHL32
NAPEPLD
ACOT9
GSTP1
CYP27C1
SOBP
LSMEM1
ASXL2
MYOD1
ZDHHC5
HIGD1C
KDM2A
PACS2
BRF1
THEM4
MPP5
CLDN5
SCAMP4
RIN2
INSR
HNRNPD
ADAT3
KLHL30
DRAM2
CEPT1
STX16
PEX10
MATR3
SLURP1
RNF170
HOOK3
RNF187
NNMT
PRKAB2
CHD1L
BCL2L13
DENND5B
SPG21
SLC19A3
POLA2
OPRD1
GPATCH8
PLXNB2
ANP32E
ST8SIA1
RYR1
RFTN1
NBPF4
PPP1R15B
HNRNPA2B1
COL16A1
CBX3
ABCC3
FKBP1A
SNORC
PDZRN3
SBK2
PTPN12
CNN3
CHD3
CBLN1
PPP1R3D
FAM217B
SPRY4
ABLIM1
STRN4
NEDD4
FKRP
EPC2
SLN
DHRS13
CDC34
CD47
ZSWIM5
MXI1
ZNF318
SRI
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
IZUMO2
SMARCD2
SCUBE3
SSBP1
MX1
SH2D3C
THOC1
NR3C2
TBC1D9
UBE2Q2
SBSPON
KRT4
CCDC171
VEGFB
EYA1
SSTR5
SREK1
HRH1
MTNR1A
ZBTB12
TBPL1
EHMT2
DYRK2
C2
SKP2
LMBRD2
CDC73
ATP6V1H
TINAGL1
PCDH7
COX20
BTBD1
MSX1
SOAT2
LBH
C3orf14
ID3
LLGL1
ZNF516
RNF44
TMEM205
SPTBN4
RAB3D
CD99L2
CCDC159
ANKRD12
TPBGL
RAPGEF4
CIC
ARMH3
MUSTN1
ITIH4
TSC22D1
SUGCT
STAG1
MPLKIP
BTG3
UBXN2B
PIK3AP1
TAFA5
TCF4
SIX1
SASH1
MIF4GD
LIMCH1
NR2E3
KLHL24
DISC1
ABAT
UGT2B10
TLK1
KDSR
ECE1
TPM1
PTCH1
PDXP
PTMA
RUNX1
INTS12
GSTCD
CELA3A
KMT2C
FOXO3
SOCS2
LBR
GABRA2
BRD2
PPP6R1
AKAP1
UTP23
KDM3A
IL32
CORO2A
NFIC
GMEB2
DAB1
BTBD9
ZNF652
TMEM210
TBL2
SPATC1L
LRRC26
AIG1
TANC2
SCNN1D
UGCG
SCIMP
C2CD5
SMAD7
KCNQ3
ZNF185
NR1D2
VGLL3
SVIL
ENTPD2
TRAF4
PTPRD
INTS10
FANCC
FAM189A1
AMIGO1
WDR87
SIPA1L3
MAST4
CREB3L1
JPH3
CHRNA7
E2F6
VPS11
SYNGR1
TRIM62
TMEM145
FBXL16
FAM222B
RAB10
ZNF92
DNAJC5
AGTPBP1
NPTX2
TNNT2
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
NTSR1
BSN
UBE2D3
C16orf87
UMODL1
SMIM34A
ZNF559-ZNF177
ZNF559
ZBTB8OS
USP6NL
RGS19
RBBP4
CUL5
SREBF1
NUTM2G
CNKSR2
CCNI
TAOK3
PAFAH2
PDS5A
S100A2
NAPA
ISX
HSF1
BOP1
ATP6V1C1
HIF3A
ADM
NAA38
HECTD2
PALD1
COPG2
PREX1
GRK3
HDAC9
MAPK3
TP53AIP1
PDGFA
ETNPPL
DUSP14
MAT2A
SLC25A12
ARL14EP
RAD23A
LAPTM4B
FBXO30
ARHGAP5
MYH7
MEX3B
FAM240C
CMTM2
RNF144A
GALE
TMEM39B
RAB37
POLR2M
TP53I13
TBC1D14
SOX12
OTUD7B
DBNL
ABHD15
TBC1D1
GUCA2A
CLK1
CAMKK2
TRIM16L
MCUR1
LURAP1L
TOB1
SAXO2
PPP1R3E
NUDT10
MAX
HSPA2
FBXL17
EFL1
BCL2L2-PABPN1
BCL2L2
TBC1D19
SMIM13
DGKK
COMMD4
EIF4EBP1
ZNF821
MYLK4
TGFB3
TACC1
PTGIS
IFT43
UBL4A
SLC10A3
NAV2
KLF13
GAA
CDH11
C6orf58
TRIM55
DYNC2H1
ANGPT1
ZNF609
GFUS
WDPCP
VEZT
SMAD3
HPCAL1
FGD6
BDNF
RFPL3
PLEKHA5
HPS5
GTF2H1
FLCN
MAP3K7CL
HK1
HDGFL2
ETAA1
NCAM1
ZFP1
UHRF1BP1
SLC25A22
NOVA2
GRN
DDX19B
AARS1
ST3GAL5
C20orf204
TMPRSS11F
MBOAT2
LMF1
KDM4C
DPYD
SLC25A34
NUP50
IFRD1
ACSL4
NUTM2F
SFXN4
TMEM201
SPATS2L
SLC16A8
RPS7
RASGRP3
OSGEP
APEX1