About This Database

Protein

Data description

Data name

Protein

DOI

10.18908/lsdba.nbdc01161-002

Description of data contents

It is a summary table of protein information in individual projects; such as protein name, abbreviation, organism and terms for searching protein information on other websites.

Data file

File name :

tp_atlas_protein.zip

File URL :

https://dbarchive.biosciencedbc.jp/data/tp_atlas/LATEST/tp_atlas_protein.zip

File size :

49.8 KB

Simple search URL

http://togodb.biosciencedbc.jp/togodb/view/tp_atlas_protein#en

Data acquisition method

Data analysis method

Number of data entries

849 entries

Data detail

Data item	Description
Project ID	Project ID
Sub Group	Sub group of the protein
Symbol	Symbol of the protein
Synonym	Synonym of the protein
Wiki	Search term in wikipedia
Full Name	Full name of the protein
Other Names	Other names of the protein
TaxId	Taxon identifer in UniProt Taxonomy
Organism	Organism of the protein
Entrez	Gene ID in NCBI Gene
UniProt	UniProt KB accession number
GNP	Gene ID in GNP (Genome Network Platform) (NCBI Gene ID)
Struct. PDB	PDB ID in PDBj (Protein Data Bank Japan)
Struct. P3K	PDB ID in Protein 3000 Structure Gallery
Struct. TPRP	PDB ID in TP Structure Gallery
PPI GNP	Gene ID in PPI in GNP (NCBI Gene ID)
PCI	PDB ID in PCI
TP Article	PMID (PubMed ID) in PubMed
Press Release	TP press release ID