SAHG
About This Database
Database Description
| General information of database | |
Database name
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SAHG
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Alternative name
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Structure Atlas of Human Genome |
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DOI
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10.18908/lsdba.nbdc01193-000 |
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Creator
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Creator Name
Chie Motono*  
Creator Affiliation
The Molecular Profiling Research Center for Drug Discovery (molprof), The National Institute of Advanced Industrial Science and Technology (AIST)
Literature Search
Creator Name
Motonori Ota
Creator Affiliation
Graduate School of Information Sciences, Nagoya University
Literature Search
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Contact address
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Chie Motono
Tel : +81-3-3599-8067
E-mail : 
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Database classification
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Protein sequence databases - Protein properties
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Organism
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Database description
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All of the Open Reading Frames in the human genome are subjected to a fully automated, exhaustive protein-structure-prediction pipeline to generate protein structure models. SAHG contains 42,577 domain-structure models in ~24900 unique human protein sequences from the RefSeq database. |
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Features and manner of utilization of database
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SAHG is distinct in that the prediction pipeline is focus on proteins of higher organisms, and in that conformational changes of proteins were predicted and displayed as animated image. |
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License
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CC BY-SA Detail |
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Background and funding
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Name
JST, BIRD (Institute for Bioinformatics Research and Development) |
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Reference(s)
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Article title
SAHG, a comprehensive database of predicted structures of all human proteins
Author name(s)
Chie Motono, Junichi Nakata, Ryotaro Koike, Kana Shimizu, Matsuyuki Shirota, Takayuki Amemiya, Kentaro Tomii, Nozomi Nagano, Naofumi Sakaya, Kiyotaka Misoo, Miwa Sato, Akinori Kidera, Hidekazu Hiroaki, Tsuyoshi Shirai, Kengo Kinoshita, Tamotsu Noguchi, Motonori Ota
Journal
Nucleic Acids Research, 2011, Vol. 39,
External Links
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| Original website information | |
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Database maintenance site
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* The original website was terminated.
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URL of the original website
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(Closed) http://bird.cbrc.jp/sahg |
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Operation start date
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2009/10 |
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Last update date
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2010/6/25 |
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URL of the portal site
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- |
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Whole data download
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- |
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Referenced database
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RefSeq, HPRD, EzCatDB, InterPro, UniProtKB/Swiss-Prot |
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Entry list
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Not available |
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Query search
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Not available |
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Web services
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Not available |
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URL of Web services
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- |
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Need for user registration
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Not available |