[Credits]

Life Science Database Archive
SAHG

Complex Modeling

Data detail

info Data name Complex Modeling
info DOI 
info Description of data contents 

Protein-protein copmlex modeling predition

info Data file 
File name:
sahg_complex.zip
File URL:
https://dbarchive.biosciencedbc.jp/data/sahg/LATEST/sahg_complex.zip
File size:
147 KB
info Simple search URL 
info Data acquisition method 

If a target sequence was related to a given subunit of a template complex in PQS database with >=80% sequence identity by the BLAST search and all the other subunits were related to any target sequences, the complex model was constructed by MODELLER.

info Data analysis method 

-

info Number of data entries 

8,667 entries

Data itemDescription
RefSeqID RefSeq ID
Link to Protein (only in SimpleSearch pages) link to Protein Basic Information of the same RefSeqID
regionFrom Starting amino acid residue number.
regionTo Ending amino acid residue number.
model PDB (only in SimpleSearch pages) link to model structure (PDB)
Oligomer homo oligomer / hetero oligomer
Model Model index (sequential) for a protein
Template Template for the complex modeling
Partner ID RefSeq ID of the counterpart protein in the complex.