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About This Database

Known binding sites

Data description
Data name
Known binding sites
DOI
10.18908/lsdba.nbdc01144-001
Description of data contents
Known binding sites on protein
Data file
File name :
possum_ksite.zip
File URL :
File size :
7.9 MB
Simple search URL
-
Data acquisition method

PDB

Data analysis method

-

Number of data entries

325,890 entries

Data detail
Data item Description
PocketIndex

Internal ID for this binding site

PDB_ID

PDB ID for the protein

HET_Code

HET code for the ligand

ChainID

ID for the chain where the binding site is

HET_Res.No.

Residue sequence number of the ligand

ResLength

Length of residue sequence of the site

Atoms

Num of atoms of the ligand

MolName

Molecular name of the site

EC

EC ID for the site

CATH

CATH ID for the site

SCOPe

SCOPe ID for the site

UniProt

UniProt ID for the site

UniRef50

UniRef50 cluster ID for the site (when it is analysed)

GO1

Gene ontology to indicate molecular function of the site

GO2

Gene ontology to indicate molecular function of the site

GO3

Gene ontology to indicate molecular function of the site