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Life Science Database Archive
PoSSuM

Known binding sites

Data detail

info Data name Known binding sites
info DOI 
info Description of data contents 

Known binding sites on protein

info Data file 
File name:
possum_ksite.zip
File URL:
https://dbarchive.biosciencedbc.jp/data/possum/LATEST/possum_ksite.zip
File size:
7.9 MB
info Simple search URL -
info Data acquisition method 

PDB

info Data analysis method -
info Number of data entries 

325,890 entries

Data itemDescription
PocketIndex Internal ID for this binding site
PDB_ID PDB ID for the protein
HET_Code HET code for the ligand
ChainID ID for the chain where the binding site is
HET_Res.No. Residue sequence number of the ligand
ResLength Length of residue sequence of the site
Atoms Num of atoms of the ligand
MolName Molecular name of the site
EC EC ID for the site
CATH CATH ID for the site
SCOPe SCOPe ID for the site
UniProt UniProt ID for the site
UniRef50 UniRef50 cluster ID for the site (when it is analysed)
GO1 Gene ontology to indicate molecular function of the site
GO2 Gene ontology to indicate molecular function of the site
GO3 Gene ontology to indicate molecular function of the site