[Credits]

Life Science Database Archive
Open TG-GATEs

Compound list

Data detail

info Data name Compound list
info DOI 
info Description of data contents 

Compiled list of compounds and links to gene expression data and its attribute information of each compound in Open TG-GATEs.

info Data file 
File name:
open_tggates_main.zip
File URL:
https://dbarchive.biosciencedbc.jp/data/open-tggates/LATEST/open_tggates_main.zip
File size:
6.4 KB
info Simple search URL 
info Data acquisition method 

-

info Data analysis method 

-

info Number of data entries 

170 entries

Data itemDescription
COMPOUND_NAME Compound name
COMPOUND_ABBREVIATION Abbreviated compound name
COMPOUND_NO Number assigned to each compound. Numbers are not in serial order.
Human - in vitro Gene expression data of in vitro tests with human liver cells (Link to a zip file which contains multiple CEL files)
Rat - in vitro Gene expression data of in vitro tests with rat liver cells (Link to a zip file which contains multiple CEL files)
Rat - in vivo - Liver - Single Gene expression data of single-dose in vivo tests with rat liver (Link to a zip file which contains multiple CEL files)
Rat - in vivo - Liver - Repeat Gene expression data of repeat-dose in vivo tests with rat liver (Link to a zip file which contains multiple CEL files)
Rat - in vivo - Kidney - Single Gene expression data of single-dose in vivo tests with rat kidney (Link to a zip file which contains multiple CEL files)
Rat - in vivo - Kidney - Repeat Gene expression data of repeat-dose in vivo tests with rat kidney (Link to a zip file which contains multiple CEL files)
Pathological items (Liver) Pathological findings and slide images of in vivo tests with rat liver (Link to "Pathological items", "Pathological images" and "CEL file attributes")
Pathological items (Kidney) Pathological findings and slide images of in vivo tests with rat kidney (Link to "Pathological items", "Pathological images" and "CEL file attributes")