Mouse Basement Membrane Bodymap
About This Database
Database Description
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Database name
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Mouse Basement Membrane Bodymap
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Alternative name
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DOI
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10.18908/lsdba.nbdc00574-000 |
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Creator
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Creator Name
Kiyotoshi Sekiguchi*  
Creator Affiliation
Institute for Protein Research, Osaka University
Literature Search
Creator Name
Ko Tsutsui
Creator Affiliation
RIKEN Center for Developmental Biology
Literature Search
Creator Name
Ri-ichiroh Manabe
Creator Affiliation
RIKEN Center for Life Science Technologies
Literature Search
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Contact address
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Database classification
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Protein sequence databases - Protein localization and targeting |
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Database classification
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画像データベース |
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Organism
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Database description
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This is a database of body-wide localizations of basement membrane proteins in developing mouse embryos. The database consists of hundreds of high resolution virtual slides created from gigapixel digital images representing immunohistochemically stained whole mouse sagittal and head frontal sections and hematoxylin/eosin stained adjacent sections. |
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Features and manner of utilization of database
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This database provides immunohistochemically stained virtual slides in which visitors can observe and compare expression patterns of 42 different ECM proteins in the interesting developing organs on the same platform with hematoxylin/eosin stained adjacent slides. |
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License
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CC BY-SA Detail |
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Background and funding
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JST Exploratory Research for Advanced Technology (ERATO) SEKIGUCHI Biomatrix Signaling (2000-2005)
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Reference(s)
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Article title
Transcriptome-based systematic identification of extracellular matrix proteins.
Author name(s)
Manabe R, Tsutsui K, Yamada T, Kimura M, Nakano I, Shimono C, Sanzen N, Furutani Y, Fukuda T, Oguri Y, Shimamoto K, Kiyozumi D, Sato Y, Sado Y, Senoo H, Yamashina S, Fukuda S, Kawai J, Sugiura N, Kimata K, Hayashizaki Y, Sekiguchi K.
Journal
Proc Natl Acad Sci U S A. 2008 Sep 2;105(35):12849-54. doi: 10.1073/pnas.0803640105. Epub 2008 Aug 29.
External Links
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| Original website information | |
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Database maintenance site
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URL of the original website
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http://dbarchive.biosciencedbc.jp/archive/matrixome/bm/home.html |
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Operation start date
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2008/08/18 |
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Last update date
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2015/07/21 |
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URL of the portal site
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Whole data download
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Referenced database
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Entry list
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Not available |
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Query search
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Not available |
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Web services
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Not available |
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URL of Web services
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Need for user registration
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Not available |