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Gene Name Thesaurus
About This Database

Database Description

General information of database
Database name
Gene Name Thesaurus
Alternative name
-
DOI
10.18908/lsdba.nbdc00966-000
Creator
Creator Name
Kousaku Okubo*
Creator Affiliation
The Database Center for Life Science
Contact address

Database Center for Life Science
Research Organization of Information and Systems

E-mail : dbcls ad

Database classification

Dictionary

Organism
Taxonomy Name
Homo sapiens
Taxonomy ID
Taxonomy Name
Mus musculus
Taxonomy ID
Taxonomy Name
Rattus norvegicus
Taxonomy ID
Taxonomy Name
Danio rerio
Taxonomy ID
Taxonomy Name
Drosophila melanogaster
Taxonomy ID
Taxonomy Name
Caenorhabditis elegans
Taxonomy ID
Taxonomy Name
Saccharomyces cerevisiae
Taxonomy ID
Taxonomy Name
Schizosaccharomyces pombe
Taxonomy ID
Taxonomy Name
Bacillus subtilis
Taxonomy ID
Database description

Gene names and gene family names were collected for 9 different organisms (including human, mouse, rat, zebrafish, fruit fly, nematode, budding yeast, fission yeast, Bacillus subtilis), and associated with parallel relationship (synonym) and hierarchical relationship (family name). Acronym notation and IDs of typical gene/genome databases are also treated as names.

Features and manner of utilization of database

This is not a database. But you can use it as a thesaurus. It might help you analyze and search literature with natural language processing.

License
CC BY-SA Detail
Background and funding
Name
MEXT Integrated Database Project
Reference(s)
-
Original website information
Database maintenance site
URL of the original website
https://dbarchive.biosciencedbc.jp/en/lsdb-gene-thesaurus/desc.html?thanks=dbmeta_ja
Operation start date
2007/3
Last update date
2007/3
URL of the portal site
http://lifesciencedb.jp/lsdb.cgi?lng=en
Whole data download
https://dbarchive.biosciencedbc.jp/en/lsdb-gene-thesaurus/desc.html?thanks=dbmeta_ja
Referenced database

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Entry list
Not available
Query search
Not available
Web services
Not available
URL of Web services
-
Need for user registration
Not available