GGGenome dataset
About This Database
Database Description
| General information of database | |
Database name
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GGGenome dataset
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Alternative name
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- |
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DOI
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10.18908/lsdba.nbdc01424-000 |
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Creator
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Creator Name
Yuki Naito**   
Creator Affiliation
Database Center for Life Science
Literature Search
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Contact address
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https://dbcls.rois.ac.jp/contact-en.html |
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Database classification
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Nucleotide Sequence Databases |
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Database description
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GGGenome is a tool for fast and sensitive search for genomic and transcript sequence. You can use it in Web (https://GGGenome.dbcls.jp/) and as a distributed Docker container. If you use the Docker container, you have to set this dataset in it. Contact the above "Contact address" about the distribution of GGGenome container.
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Features and manner of utilization of database
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GGGenome exhaustively searches short sequences allowing mismatches and gaps. |
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License
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CC BY Detail |
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Background and funding
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Name
MEXT Integrated Database Project
Name
Life Science Database Integration Project
Name
Development of fundamental technologies related to integration of databases |
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Reference(s)
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-
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| Original website information | |
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Database maintenance site
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Database Center for Life Science |
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URL of the original website
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https://GGGenome.dbcls.jp/ |
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Operation start date
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2012/07/04 |
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Last update date
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2019/07/31 |
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URL of the portal site
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https://dbcls.rois.ac.jp/ |
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Whole data download
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- |
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Referenced database
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- |
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Entry list
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Not available |
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Query search
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Not available |
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Web services
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Not available |
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URL of Web services
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https://GGGenome.dbcls.jp/ |
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Need for user registration
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Not available |