Search for Data Metadata
| Data name ⇅ | Database name ⇅ | DOI ⇅ | Description of data contents ⇅ | Data acquisition method ⇅ | Data analysis method ⇅ | Data detail |
|---|---|---|---|---|---|---|
| RPD link result | KOME | 10.18908/lsdba.nbdc00120-028 |
Results of homology searches against the Rice Proteome Database |
Performed blastn searches with the full-length cDNA clones against the Rice Proteome Database. |
Data detail
open_in_full
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| SwissProt search result | KOME | 10.18908/lsdba.nbdc00120-019 |
Results of blastx searches against the Swiss-Prot database |
The Swiss-Prot database was used for the searches. |
Performed blastx searches against the Swiss-Prot database.
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Data detail
open_in_full
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| Tos17 link result | KOME | 10.18908/lsdba.nbdc00120-014 |
Relation with Tos17 mutant clones |
The flanking sequences of Tos17-induced insertion mutants obtained from the Rice Tos17 Insertion Mutant Database were used. |
We predicted that there would be relations between the overlapped regions that emerge by mapping both the Tos17 flanking seqeunces and the full-length cDNA clones to the rice genome BAC contigs.
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Data detail
open_in_full
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| Trimming information | KOME | 10.18908/lsdba.nbdc00120-030 |
Nucleotide sequences that the regions predicted to be poly(A) sites and vector-derived sites were trimmed.
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Data detail
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| UniProt search blastx result | KOME | 10.18908/lsdba.nbdc00120-020 |
Results of blastx searches against the UniProt database |
UniProt Knowledgebase Release 6.3 was used for the searches. |
Performed blastx searches against the UniProt database.
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Data detail
open_in_full
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| Data name | Database name | DOI | Description of data contents | Data acquisition method | Data analysis method | Data detail |