| Data name ⇅ | Database name ⇅ | DOI ⇅ | Description of data contents ⇅ | Data file ⇅ | Simple search URL ⇅ | Data acquisition method ⇅ | Data analysis method ⇅ | Number of data entries ⇅ | Data detail |
|---|---|---|---|---|---|---|---|---|---|
| BlastX Result : TrEMBL | AcEST | 10.18908/lsdba.nbdc00839-003 |
Results of the blastx search of Adiantum capillus-veneris EST (AcEST) sequences against the UniProtKB/TrEMBL (release 39.9) database. The alignment information of each hit in the Blastx hit list is provided on a single line. CSV format text file. |
blasthits_tr.zip
(7.03MB) |
http://togodb.biosciencedbc.jp/togodb/view/archive_acest_blasthits_tr#en |
blastx search |
The blastx search was performed between Adiantum capillus-veneris EST sequences and the UniProtKB/TrEMBL database. |
303,873 hits |
Data detail
open_in_full
|
| Gene expression data list | AOE | 10.18908/lsdba.nbdc00467-001 |
An index of public gene expression database. |
aoe_data_list.zip
(9.2 MB) |
https://togodb.biosciencedbc.jp/togodb/view/aoe_data_list#en |
ArrayExpress, Gene Expression Omnibus(GEO), Genomic Expression Archive |
- |
123,756 entries |
Data detail
open_in_full
|
| Experimental Condition | Arabidopsis Phenome Database | 10.18908/lsdba.nbdc01509-006 |
Environmental factor necessary to express phenotypes
|
cpp_exp_condition.zip
(0.8 KB) |
http://togodb.biosciencedbc.jp/togodb/view/cpp_exp_condition#en |
Plant Environment Ontology, ChEBI |
22 entries |
Data detail
open_in_full
|
|
| Image of Arabidopsis phenotype | Arabidopsis Phenome Database | 10.18908/lsdba.nbdc01509-002 |
Mutant images in "Observation of Arabidopsis phenotype" |
piam_image.tar.gz
(8.4 GB) |
- |
Ds tagging line, Ac activation tagging line, Fox-hunting line |
7,341 entries |
Data detail
open_in_full
|
|
| Observation of Arabidopsis phenotype | Arabidopsis Phenome Database | 10.18908/lsdba.nbdc01509-001 |
Observation data are distinguished by phenotype, method of mutation, mutant ID etc., and standardized with appropriate ontology terms. The listed observation data are correspond to original observation data one-to-one,which are presented in databases including Ds tagging line, activation tagging line, and Fox-hunting line. |
riken_piam_main.zip
(367 KB) |
http://togodb.biosciencedbc.jp/togodb/view/riken_piam_main#en |
Ds tagging line, Ac activation tagging line, Fox-hunting line |
14,629 entries |
Data detail
open_in_full
|
|
| Data name | Database name | DOI | Description of data contents | Data file | Simple search URL | Data acquisition method | Data analysis method | Number of data entries | Data detail |
List of Data Metadata