ChIP-Atlas: Target genes

Potential target genes for Rfx3

Query protein: Rfx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7671907 | Embryonic brains
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rfx3's Target genes

◢ Rfx3: Average

◢ SRX7671906: Embryonic brains

◣ SRX7671907: Embryonic brains

◢ SRX1161945: MIN6B1

◢ Rfx3: STRING

Sema4b
Cnih2
Tmx4
Ssbp2
Cfap54
Mks1
Chd4
Tox2
Tppp3
Ncoa5
Elmod2
Wdr90
Ccdc30
Dnajc16
Casp9
Sik3
Pafah1b2
Mapre3
Rfx1
Hydin
Map9
Bbs5
Pin1
Nudt2
Kif24
Ttll10
Gdf1
Cers1
Zdhhc1
Cfap298
Pnma1
Lrriq1
Ufsp2
1700029J07Rik
Spef2
Anks3
4930451G09Rik
Sdcbp
Gar1
Cfap20
Muc1
Pold3
Cfap65
Ccdc57
Fhad1
Cfap44
Syt5
Xrcc1
Pinlyp
Ccdc39
Ropn1l
Fam204a
Tecpr2
Cinp
Hspa12a
Eno4
Eif2b2
Eaf2
Lrrc49
Mink1
Wfdc3
Dnttip1
Fam227b
Dtwd1
B9d1
Tctn2
Wdr31
9530077C05Rik
Samd4b
Gmfg
Dusp18
4921536K21Rik
Prdm4
Fam214a
Prkcsh
Ccdc151
Ubn2
Etfrf1
Casc1
Irak1bp1
Morn2
Dhx57
Eif4a3
Mindy4
Dync2h1
Dcun1d5
Slc6a19
Akap11
Sipa1l1
Nucb2
Ccdc181
Pigx
Cep19
Rpl30
Mapk8ip1
Wdr34
Dad1
Abhd4
Fos
Lmbrd1
Fbxw7
Dyrk1a
Ppm1e
Stoml2
Poll
Dpcd
Orai3
Sik1
Saxo2
Efl1
Trip4
Csnk1g1
Ywhaq
Iqsec1
Josd2
Aspdh
Hspbp1
Map6
Tmem138
Cyb561a3
Srek1
3110082I17Rik
Gtf2f1
Txndc17
4933427D14Rik
Fanci
Rlbp1
Csnk1g2
Tmem237
Ccdc113
Gstt2
Ccdc13
Mlec
Kifbp
Cbx5
Rfx3
Fez1
Arl6
Rundc1
Ptges3l
Pofut2
Ccdc158
Cetn4
Bbs12
Pak1ip1
Dyrk1b
Phc2
Tctex1d2
Wdr66
Cep112
Fam131a
Ptpn13
Meig1
Dclre1c
Rara
Katnal2
Rtca
Dbt
Marchf9
Cdk4
Rer1
Morn1
Jam3
Ankfy1
Cabin1
Mettl15
Kif18a
Klhl18
Kif9
Nr2f2
Tmem9
Myg1
Lrrc56
Hras
1700030J22Rik
Nup50
Foxj1
Morn3
Rsph1
Prr7
Usp30
Pltp
Dync2li1
Ankrd13d
Ttll9
Prr3
Gnl1
Tsnaxip1
Ranbp10
Wdr60
Map1a
Cherp
Eri3
Wdr78
Mier1
Sde2
Mycbp
Stk32c
Lrrc27
E4f1
Dmwd
Nek2
Armc3
Trim2
Lfng
Ccdc184
Asb8
Lrrc6
Ccdc65
Pi4k2a
Morn4
Brd3os
Fam183b
Wdr27
1600012H06Rik
Ccdc34
Zfp523
Pifo
Gemin8
Zc3h3
Tbc1d32
Klhdc10
Lmtk3
Tasp1
Cep162
Cfap36
Timm10
Smtnl1
Ube2o
Ap3m2
Mtf1
Sirt3
Psmd13
Mrpl10
Lrrc46
Tbcel
Crnkl1
Cfap61
Oscp1
Sun3
Gm11992
Dyrk3
Ebna1bp2
Cfap57
Ap1s1
Ywhaz
Cnpy3
Gcc2
Etfbkmt
Efcab1
Tmc3
Dixdc1
Cfap221
Usp2
Sclt1
D3Ertd751e
Smg7
Agbl3
Wdr35
Spsb2
Ppp2r1a
Neurl4
2810408A11Rik
Lrrc73
Maats1
Mok
Cox17
Tsga10
Sf3a1
Ccdc157
Cfap161
Rnf141
H1f10
Tube1
Fam229b
Oxnad1
Dph3
1700094D03Rik
Ssc5d
Nat14
Bbs1
Chchd3
Prepl
Camkmt
1110051M20Rik
Nap1l1
Ift74
Caly
Marchf8
Cfl1
Pcgf1
Cyp46a1
Smpd2
Ppil6
Jund
Iqcn
Agtrap
Nbr1
Brca1
Ddx41
Prkar1a
Kcnn1
Nme7
Blzf1
Wdfy1
Ptdss2
Rpgrip1l
Fto
B9d2
Rgl1
Arpc5
Lca5l
Galk2
Cops2
Mafg
Mthfr
Clcn6
Ddx24
Dnah2
Sertad3
Chchd6
Gm12500
Ampd2
Rlf
Kmt5c
Setd4
Cbr1
Uvrag
2410004P03Rik
Cplane2
Ap1m1
Peli1
Gde1
Mapk7
Dbn1
Trit1
Lrrc23
Trub2
Iqch
Aagab
Pick1
Itsn1
Cryzl1
Pak4
Nkiras2
Dnajc7
Lins1
Pitpnm1
Cdk2ap2
Ift57
5031439G07Rik
Tmem17
Ppp5c
Cfap69
Brms1
B4gat1
Thnsl1
Enkur
Zfp24
Rpl35a
Iqcg
Kcnip3
Ovca2
Hic1
Ppp1r7
Pask
Fndc11
Mib2
Cfap97d2
Cfap43
Ubxn6
Hdgfl2
Lrguk
Spata7
Mbd4
Ift122
Lcorl
Traf3
Hat1
Gpsm3
Tada2b
Ccdc96
Ak1
Gpn3
Fam216a
1700010I14Rik
Ripor1
Camk2a
Plch1
Lyrm4
Fars2
1700037H04Rik
Tubgcp3
Daam1
Ccpg1os
Ccpg1
Tomm7
Dffb
Cep104
Srf
Armc9
Nsmce1
Rnf32
Ralgapa1
Gtf2e2
Kif6
Katnal1
Intu
Sf3b5
Rhbdd2
Ankef1
Dnajc1
Dnajc25
Klhdc9
Spef1l
Gnb2
Slc4a8
Cldn34d
Prkar1b
Dnaaf5
Mpc2
Dcaf6
Mfsd4b4
Lsm10
Naa40
Micos10
Ttll3
Ttc41
Hsp90b1
Dlg4
Gsg1
Tbc1d19
Cfap74
Mlf1
Pgap3
Dynll1
Parp4
Cenpj
Efhc1
Dcp1b
Pbx4
Rhpn1
Acap2
4930505A04Rik
Dlec1
Cdk9
Cenpf
Glipr1l1
Spats1
Dnajc10
Mns1
Kdelr3
Zbtb46
A930007A09Rik
Nsdhl
Cetn2
Tekt4
Alms1
Rnf182
Rabl2
Ipo4
Mrps9
Mark3
AI429214
Pspc1
Prmt5
Marchf10
Ccnc
Sgta
Plekhb1
Klf2
Spata2
Rnf114
Ubxn11
Crocc
Celf3
Rsph14
Rab36
Hsdl1
Dnaaf1
Psap
Zfyve28
Cfap99
Tnpo1
Dpy19l2
Tmem167b
Fam90a1b
Apoo
Psmc3ip
Ift52
Braf
Dnajc15
Ing1
Cars2
Spata6
Actr6
Dnajc24
Mapre2
Gtf3c4
Dagla
Traf3ip1
Mapk10
Afg1l
Ptges2
Tmem107
Cyth2
Ift81
Nek11
Aste1
Dnajc27
Nanos2
Mypop
Parp8
Iqca
Tfip11
Tmem218
Taok2
Cdkl4
Ap3d1
Aopep
Zmynd10
Rassf1
Nprl2
Cyb561d2
Abhd2
Tmem216
Mrpl39
Qtrt2
Ccdc191
Rbks
Babam2
Odf2
Spg21
Spag1
Sgsm1
Ywhae
Drc1
Uhrf1
Arrdc5
Arid4a
Copz1
Fam151b
Leng8
Rpl35
Arpc5l
Acox3
Slf1
2210408I21Rik
Trim39
Stx18
Stxbp4
Cox11
Spcs1
Glt8d1
Stpg1
Nipal3
Fgr
Zfp407
Thbs3
Mtx1
Mzf1
Tmem209
Ssmem1
Spice1
Timm13
Gtf3c1
D430042O09Rik
Derl1
Sdccag8
Cep170
Ndufs5
Dnaaf3
Rfc5
Ccno
Stk11ip
Gdf11
Dusp6
Lpin2
Ift22
Ccar2
Nsun7
Tmtc3
Cep290
Adgra1
Igsf11
Tmem108
Dnah11
Ttc26
Ift88
Ndrg4
Dnah9
Pomt2
Gstz1
Fank1
Dhx32
Knop1
Iqck
Rpn1
Mocs3
Dpm1
Ehd1
Glipr1l3
Caps2
Mast3
Epb41l4a
Ubxn10
Pla2g2c
Cenph
Myo1e
Orai2
Tcea2
Sox18
Trip12
Fbxo36
Dennd2a
Ctxn1
Abi2
Tnks
Glb1l2
Itpkc
Coq8b
Rem2
Dnaaf2
Rab11fip2
Tmem89
Dmkn
Ppp1r16a
Foxh1
Bub1
Timm21
Fbxo15
Crocc2
Ccdc187
Ift172
Fndc4
Cep128
Odf2l
U2af2
Ccdc106
Ulk4
Mapk15
Hsph1
Tex9
Wdpcp
Mdh1
Olfr1344
Aqp4
Med31
4930563E22Rik
Tmem231
Stx8
Cfap52
Usp29
Peg3
Slc25a3
Polr2f
1700088E04Rik
Ccdc126
Eif2s1
Atp6v1d
Rhobtb2
Cdca4
D230025D16Rik
Nme5
Psma5
Rps6kc1
Nacad
Phc1
Arf2
Mtmr6
Cfap20dc
Stk33
Hmgn2
Arfip1
Igsf9
Mxi1
Tusc3
Hook2
Bdh1
Stk19
Dxo
Ankrd54
Snrpd2
Qpctl
Hmgcr
Ubxn2b
Coq3
Slc25a46
Wwox
D130043K22Rik
Rnf5
Agpat1
Lmna
Tedc1
Crip1
Ppm1g
Smc1b
Fam227a
Cby1
Sec61a2
Wdr7
Mapkbp1
Mafa
Hspa2
Esrra
Catsperz
H13
Bbs7
Srfbp1
Zc2hc1c
Acyp1
Fam110a
Tufm
Hsp90aa1
Cnnm2
Smarcad1
Rrp12
Spata17
Gpatch2
Mfrp
C1qtnf5
Phf20
Aspm
Rpl24
Tmem29
Sorbs2
Notch1
Rps15
Apc2
Slc9a8
Itgb3bp
Efcab7
Zmat2
Fzr1
Zbed5
Slc25a14
Fbf1
Tpgs1
Madcam1
Agbl4
Wars2
Cacfd1
Cluap1
1700037C18Rik
Rsph4a
Skiv2l
Nelfe
Cep164
Nsmf
Ppil4
Dhx16
Bbs9
Pik3r2
Smpd3
Dcaf12
Cmtr2
P4ha1
Id2
Msi1
Cog7
Arrdc3
Kif3b
Tuba1a
Tctn3
Entpd1
Sfxn2
Arl3
1700016K19Rik
Dnal1
Pde4a
Cystm1
Nbas
Med9
Map3k14
Mcm7
Ap4m1
Togaram1
Klhl28
Pold2
Dym
Zswim2
Ppp1r12c
Calm2
Fscn2
Lbhd2
Zfp688
Rsph3b
Usp20
BC005624
Map3k12
Cfap410
Sec16a
Gas2l1
Rasl10a
Zc3h10
Rpl41
Zdhhc23
Tsen2
Tspyl5
Rtl6
Cplane1
Cpd
Pheta2
Naga
Ccdc180
Erich2
Safb2
Safb
Wdr54
1700003E16Rik
Hspa1l
Hspa1a
Map7
Zfp287
Btbd9
Spag6l
Zbtb40
Gata2
Wdr13
Spout1
Shq1
Ttc21a
Gorasp1
Fam98b
Wdtc1
Ift27
Klhdc8b
Ccdc71
Wfdc1
Ap2a1
Myo10
Repin1
Gm5111
Pcsk1n
Cfap46
Pih1d2
Nkapd1
Coa8
Bag5
Ruvbl1
Cxxc1
Tmem67
Rbm12b2
Rap2a
Amz2
Ahi1
Zbtb48
Dusp3
Cfap97d1
Dnah10
Kiz
Smc6
Gen1
Capn10
Vwa3b
Rpf2
Rrp7a
Plin5
Lrg1
Zfp408
Arhgap1
Casp6
Gas7
Dnal4
Znhit1
Plod3
1500009L16Rik
Zfp819
Nova2
Serf1
Bdp1
Spef1
Cdc37
Jun
Dnah7a
Otub1
Wdr17
Cdkl1
Tbc1d16
Ccdc40
Fam47e
Msmo1
Tdrp
Naa20
Wdr93
Pex11a
Ttc25
AU041133
Zeb1
Cdc14a
Stk16
Glb1l
Sap18b
Sap18
Zfp36l2
Rpp38
Acbd7
Polk
Cert1
Stam2
Ptpn21
Gpr19
Fam187a
Eftud2
Ccdc103
Edem3
Rsph9
Iqce
Brat1
Nphp4
Kcnab2
Nek5
Zswim1
Mthfd2l
Tmem260
Adamts1
Cwf19l2
Acot1
Ppp1r11
Crem
Crip2
Pibf1
Dis3
Mrpl58
Fscn1
Cars
Atp23
Mpc1
Hgs
Arl16
Dcaf5
Zfp719
Mrpl22
Gemin5
Ankrd6
Spaca9
Ak8
Alkbh5
Deup1
Ssbp4
Denn2b
Gnl2
Trmt61a
Meak7
Sufu
Actr1a
Yipf5
Pcnx4
Ecrg4
Ddx20
Copb2
Gm973
D5Ertd579e
Lekr1
Snrpf
Tcp11
Mfsd4b1
Dnaja1
Plxnb1
Man2c1
Radil
Pitx3
Gbf1
Rdh5
Bloc1s1
Tagln2
Nek4
Ptpn4
Trim33
Thop1
Pdgfa
Bphl
Ankrd42
Gtf2ird2
Ptms
Elmod1
Ndufaf7
Cebpz
Xpnpep3
St13
Glrx5
Tekt1
Rpgr
Ankfn1
Odc1
Ankrd45
Tent5c
Fkbpl
Atf6b
Mul1
Enkd1
4933405L10Rik
Yeats2
Zfp446
Pkig
Mex3c
Cep135
Inpp4a
Junb
Lrriq4