ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Cdk9 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◣ Cdk9: Average

◢ SRX104410: ES cells

◢ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◢ SRX255482: MEF

◢ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◢ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◢ SRX735310: Th2 Cells

◢ SRX735282: Unclassified

◢ SRX735292: Unclassified

◢ Cdk9: STRING

Cldn34d
Kpna1
Il31ra
Olfr806
Abhd6
Sspn
Wwox
Dchs2
Tmem125
Csf2ra
Ifna13
Fyco1
Ube2a
Pgk1
Tmem267
Cdh12
Vmn2r4
Aadacl2fm1
Nemf
Scrib
Calcoco1
Oasl1
Fam227b
Dtwd1
Vmn2r102
H3c6
H3c15
H3c14
H2ac19
H2ac18
Zfp143
Tex14
Actb
9430015G10Rik
Ubc
Clcn4
Rptor
Mrpl44
Gm3448
Gm3417
H2bc6
Rpl3
Chac1
Errfi1
Eapp
Snx17
Eif2b4
Sfi1
Gtf3c6
Ap1g1
H1f2
Nabp1
Hspa5
Ddx23
Prcc
Cnot1
Dync1i2
Rps29
Phf12
Banp
H4c14
H2bc21
H2ac21
H2ac20
Actg1
H3c13
H2bc18
Opa1
9030025P20Rik
H3f3b
Taf12
H4c4
Cpsf1
Aaas
Mcl1
Nr4a1
Gm3435
Srsf2
Mfsd11
Ifrd1
Nedd8
Gmpr2
Lima1
Calm1
Arntl
Ddx5
Cep95
Copz1
H4c11
Jund
Iqcn
H4f16
H2aj
Dusp2
Astl
Tent5c
Cltc
Tmed2
Phb
H3c11
H2bc22
H2ac22
Pprc1
Trp53rkb
Ep400
H2bc12
H2ac12
Eef1a1
Atf4
Tbcd
Tcte3
Sepsecs
H1f4
Ermard
Usp48
Mettl25
Ccdc59
Chmp6
Mrpl19
Egr1
H3c7
H2bc9
H3c10
Mtg1
H4c6
H1f3
Ccn1
H4c8
H3c8
H2ac10
S1pr4
Ncln
H1f5
H2ac4
H4c3
H1f6
Eef2
H4c2
H3c2
Znfx1
Nme1
Tpm1
Sp1
H2bc13
H2ac13
H4c12
H2bc15
H2ac15
H2bc3
Pex14
Sharpin
Maf1
Gm35339
Unk
H4bc24
H2bc23
H2ac24
H2ac23
Kif2c
Dusp1
Dapk3
Ctnnb1
Phlda1
Gm13285
Pknox1
Nop14
Grk4
Ap2m1
Tle3
Ndufs7
Rps20
Ube2j2
Htra2
Dqx1
Aup1
Poldip3
Ndufaf5
Esf1
Tmem88
Krr1
Wdr70
Crtc2
Mrpl39
Gm13290
Gm13289
Chmp4b
Dcaf5
Atf6
H2ax
Ifrd2
Dcp1a
Slc35g3
Polr2a
Med6
Ier2
Mtf2
Eif2b5
Dhx33
Crebl2
H3c3
Atp5o
Dnajc16
Casp9
Tti2
Sirt4
Pigu
Drg2
Btg1
Klhl17
Cenps
Dnttip2
Dhx16
H2bc4
H2ac6
Arl14ep
Ufl1
Smg8
Ncbp2
0610012G03Rik
Fus
Tsfm
Mterf1b
Fastkd1
Cdkn2aipnl
Hspa8
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Hsph1
Sec61a1
Rdm1
Snx18
Ndufa9
Akap3
Zc3h6
Zfp598
Naa38
Cyb5d1
Junb
Dmap1
Thbs1
Get1
Tmem168
Med23
Ubxn1
Get4
Flad1
Tob1
N4bp2l2
Ndufs4
Tmem107
Gm13287
Prdx1
Fitm2
Serpine1
Sass6
Lrrc59
Mterf1a
Tab1
Retsat
Elmod3
Muc3
H4c17
Rbl2
Zdhhc1
Pold3
Ifng
H2bc14
Zfp637
Cotl1
Eif4a2
Usp5
Cdca3
Psmd7
Mff
Ttc4
Rhot1
Mat2a
Psmd3
Snrpc
Zcwpw2
Pcbp1
Azi2
Sde2
Kpnb1
Gtf2b
Rplp0
Nfat5
Ccl1
Hnrnpa2b1
Cbx3
Dffb
Cep104
Proser1
Nhlrc3
Sphk2
Rpl18
Fam83e
Tsnaxip1
Ranbp10
Dpy19l4
Btrc
Rad54l2
Pcif1
Klf7
Uspl1
H4c18
Gpr84
Ccn2
Mtmr10
Ptgs2
Fbxl18
Terf2
Zfand5
Odc1
Gsk3a
Ccnl1
Napepld
Anapc5
Gatb
Gm13288
Med27
Mapkapk5
Rpp30
Nup153
Bud13
Timm13
Ndufs3
Kbtbd4
Malt1
Eif4e2
Rab33b
Setd5
Pigq
Nhlrc4
Snx5
Mgme1
Ddit4
Tmem101
Cox6c
Phf23
H4c9
H4c1
H2bc11
H2ac11
Dvl2
Trmo
Ppia
Gpn3
Fam216a
Ndufb8
Insig1
B4galt7
Slc39a13
Rbm39
5730455P16Rik
Mrpl21
Ighmbp2
Slc33a1
Nup54
Rbm17
Fth1
Scaf1
Rras
Clptm1l
Snrpd3
Gucd1
Gm13275
Palb2
Dctn5
Cul2
Clpb
BC107364
Adpgk
Tob2
Eif5
Galk2
Cluh
Cops2
Pole4
Gabpb2
Id3
Cirbp
Gm13279
Gm13278
Chordc1
Mmachc
Kat7
Ccdc163
Rnf123
Prkdc
Mst1
Tmem11
Rpia
Atp5g2
Nutf2
Capn15
Ier3
Flot1
Ncl
Dgat1
Bod1l
Kansl2
Nuf2
Usp30
Mapkbp1
H3c1
H1f1
Srsf1
Rps3a1
Pdcd7
Fam53c
Wdr36
Epg5
Trim50
Ppp1r10
Mrps18b
Ddx41
Rpl38
Ythdf2
Tkfc
Raf1
Psmg3
Ddb1
Vta1
Vim
Setdb1
Gmfb
Stx16
Trp53rka
Ndufc2
Mrpl1
Nelfa
Ubb
Gtf3c3
Ppp6c
Herpud1
Sdad1
Tmed9
Adnp
Tmem262
Ska2
Prr11
Yipf2
Timm29
Zbtb37
Sympk
Foxa3
Btbd8
Larp4
Smarca4
St3gal2
Ulk2
Srp68
Alad
Fra10ac1
Zfyve19
Dusp5
Dnajc17
Rps19bp1
Fubp1
Dnajb4
Yars
S100pbp
Stx18
Slc38a2
Slc25a32
Dcaf13
Slc9a1
Epc1
Rubcn
Ctdp1
Zfp868
Srp19
Eif1
Cbr3
Tyw3
Snrpa1
Eif3c
Cryz
Trip4
Rps8
Taco1
Psd
Fbxl15
Ccdc88a
Kmt2d
Ptpn6
Grcc10
Ttc41
Hsp90b1
Map1lc3b
Dis3l2
BC005537
Ccl4
Ier5
2610001J05Rik
Fem1b
Xpc
Snrpd1
Lsm3
Kbtbd7
Acp2
Gspt1
Btbd19
Puf60
Mrpl20
Pole3
Ints12
Gstcd
Vps72
Pip5k1a
Pafah2
Dnajb12
Sgk1
Birc2
Psmd12
Timm50
Nfkbia
Med17
Trdmt1
Pbld2
Hnrnph3
Rabl6
Celf2
Ankrd40
Plk2
Gm2237
Vps51
Tmem115
Snw1
Cipc
Cep128
Pde6d
Cops7b
Psat1
Irak2
Dnajc11
Slc3a2
Klhdc4
Nufip2
Blmh
Atg16l1
Dus1l
Sp2
Rasip1
Mphosph10
Mcee
Izumo1
Klhl18
Kif9
Phf13
Faf1
Hjurp
Haspin
A730008H23Rik
Morf4l1
Armc1
Trmt44
Atad5
Trib3
Zfp869
Zfp668
Zfp646
Smarcal1
Hexim2
Fam149b
Ecd
Cdkn2d
Pemt
Rnf7
Hsp90aa1
Zc3h10
Rpl41
Tmem242
Nprl2
Cyb561d2
Zfp988
Eif4a1
Ube2z
Gapdh
Aacs
Mrps33
Mrpl35
Hnrnpab
Smn1
Luc7l
Borcs7
Vpreb1
Top3b
Mtrex
M6pr
G3bp1
Dhx29
Tiparp
Nubp1
Gm13272
Ccl3
Lars
Dcps
Sfxn5
Sar1b
Zar1l
Tchp
Tatdn3
Nsl1
Brca2
Psmb2
Flnc
Efcab2
Gm13277
Dcaf10
Sec22b
Knl1
Agk
Scnm1
Lysmd1
Tspan4
Snrpe
Polr2l
Frg2f1
Foxj3
Srsf5
Tarbp2
Map3k12
Gtf2a1
Pkm
Mvk
Mmab
Ube2g1
Inpp5k
Rprd2
Suz12
Ppip5k2
Gin1
Ccdc77
Mrps15
4933430I17Rik
Lamtor5
Tuba1b
B9d1
Pdss2
Dus2
Ddx28
Olfr819
Rdh14
Chrac1
Atp6v1h
Brf1
Snrnp27
Esyt2
Arfgap2
Dhx30
Tmem123
Rel
Ube3c
Tpt1
Pfdn5
Ahcyl1
Map2k2
Zfp846
Katnb1
Eps15
Tekt2
N6amt1
Eci1
Dexi
Clec16a
Adprhl2
Zfp189
Rps12
Pten
Mrpl50
Hsp90ab1
Ankar
Usp31
Ptbp1
Pop7
Tmem214
Ankle2
Zfp36l1
Slc35b4
Nfyc
Zfp963
Slbp
Ppp1r11
Eif3a
Bicd2
Invs
Erp44
Cct4
Secisbp2
Scfd1
P4ha1
Wnk1
Acer3
Hnrnph1
Lonp1
Catsperd
Cep63
Anapc13
Fam174c
Cct8
Txnl1
Tubb4b
Kmt2a
Ikzf5
Cwc22
Atad2
Acadsb
Mbd6
Ddit3
Olfr62
Dnajb1
9530077C05Rik
Rpl5
Gid8
Dido1
Sbno2
Trmt1
Nacc1
Chchd6
Bub3
Urgcp
Tnf
Rpl27
Pcbp2
Lta
Trmt10a
Tmem43
Mttp
Chchd4
Arl8b
Tgfbr3l
Snapc2
Mrpl12
Eefsec
Rsrp1
Ormdl3
Aasdh
Commd2
Bms1
Polr2m
Max
Mis12
Derl2
Rabac1
Gm13276
Dnaja1
Srek1
Txn1
Pomp
Rad50
Pcnp
Nfe2l2
G3bp2
Rab1a
Clcn7
Med4
Vps18
Mrpl58
Cog7
Ccp110
Tbck
Rint1
Aimp1
Gtpbp2
Cstf1
Aurka
Rpl13
Hus1
Pex3
Adat2
Zfpl1
Hdhd3
Cdca5
Hps5
Gtf2h1
Csgalnact2
Tmem248
Ifnz
Exosc6
Ssbp1
Il2
Cbwd1
Taf11
Phf20l1
Pabpc1
Hmox1
Anks1
Hemk1
Zfp866
Rpl10a
Zc3hc1
Alg1
Uchl5
Ro60
Cnpy3
Cnot10
Arid1a
Syn2
Ube4a
Mtres1
Ints5
1810009A15Rik
Cdca4
Slc39a3
Nsrp1
Kctd5
Srcap
Prmt6
Nsa2
Mt2
Gfm2
Psmc6
Kpna6
Utp3
R3hcc1l
Gpatch8
C87436
Gm13283
Csf1
Plcd3
Eef1akmt4-ece2
Eef1akmt4
Ddx56
Alg3
Acbd4
Tbc1d7
Slc27a4
Rbm33
Pcna
Fntb
Kmt2e
Rgl2
Orc5
Sppl2a
Pum3
Hnrnpa1
Cbx5
Riok1
Mtmr2
Cited2
Cage1
Sf3a3
Psmd9
Epn1
Rbm34
Ccpg1os
Ccpg1
Ubqln4
Lamtor2
Cdk12
H2-DMa
Brd2
Selenot
Rps21
Rab5if
Mmaa
Klhl20
Cops8
2700062C07Rik
Wdr4
Ppp1r7
Pask
Ippk
Gid4
2210016L21Rik
Tmem94
Rbm25
Rps6
Rab5c
Lyrm2
Fbxo15
Trib1
Napg
Gtf2h3
Eif2b1
Prkaca
Vrk1
Thrap3
Thg1l
Mmadhc
Gadd45g
Mnd1
Coq5
Cdk7
Wdr43
Pigl
Ncor1
Golga4
Ap5s1
Rtcb
Rps24
Polr3a
Cutc
Cox15
Taf5
Pus7
Ap4e1
Wbp2
Tnfrsf12a
Thoc6
Nsfl1c
Hcfc1r1
Gatad2b
Thoc1
Hmgcr
Fos
Fam193a
Sesn1
Cwc27
Rangap1
Plag1
Nip7
Cog8
Chchd7
Wdr25
Wars
Stk25
Vegfa
Washc4
Tbc1d14
Mrpl30
Mitd1
Ift22
Calm2
Trpc4ap
Nudcd1
Eny2
Wdr61
Ctu1
Gabarap
Mapk1ip1l
Pnrc1
Man1b1
Kat6a
Cdc16
Trrap
Fmnl3
Ciao3
Adprh
Esp38
Stk32c
Lrrc27
Frmd6
Akirin2
Trmt5
Tle1
Timm21
Slc38a6
Rcl1
Ldha
Brwd1
Ndufa10
Mthfd2
Man2b2
Tefm
Mrps2
1700007K13Rik
Rcc1l
H2bc1
H2ac1
Cdk5rap2
Arid4b
Togaram1
Rps23
Pex11b
Klhl28
Zfp738
Tmem39a
Enc1
Zfyve1
Rps27rt
Rps27
Rfx7
Rab13
Pofut2
Lsm6
Gtf2f2
Atad3a
Stau1
Jtb
Tmem79
Smg5
Ints4
Gfus
Exoc2
Ranbp2
Ptpa
Crat
Cdkn1a
Ndufb5
Mrpl47
Cdiptos
Cdipt
Zfp729a
Prr5l