ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4554102 | 3T3-L1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◣ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

Cldn34d
Kmt2a
Slc39a10
Nup107
Denr
Dagla
Hnrnpa2b1
Cbx3
Haspin
Cenpu
Ddx17
Aldh18a1
Wwox
Gpr137
Bad
Baz2a
Cwc22
Speer4e
Zfp646
Zfp668
Snx12
Qrich1
Tmem125
Kansl3
Fer1l5
Cdk12
Ints10
Psmd5
Cutal
Slc25a25
Naif1
Zfp523
Styxl1
Mdh2
Vmn1r2
Fut10
Atg101
Eapp
Polq
Afg3l1
Ube2d3
Cipc
Rbm39
Tex14
Ncbp3
Eps15
Spdl1
Atxn7l2
Bzw1
Adgrl1
Gm51573
Mettl18
BC055324
Eif4a3
Mapk14
Slc26a8
Speer4d
Pradc1
Cct7
Stxbp4
Cox11
Zfp41
Nudt3
Arl14ep
Wdr77
Atp5pb
Poldip3
Arf3
Coq9
Ciapin1
Septin7
Rps19
Ube2z
Tcam1
Smarcd2
Zzz3
Ube2i
AW549877
Gm4981
Prpsap1
Hjurp
A730008H23Rik
Epc2
Lamp1
Tab1
H3c15
H3c14
H2ac19
H2ac18
Rnf115
Polr3c
Capn15
Pcbp2
Mob1a
Dnajb4
Fubp1
B4galt7
Gpx8
Rad1
Brix1
Gins3
Trim41
Hspa4
Mrpl12
Mdm2
Gm21190
Arhgef1
Proser1
Nhlrc3
Dffb
Cep104
Gins2
Zfp142
Bcs1l
Mrnip
Hdgf
Yipf4
Fam53c
Cpsf1
Sirt4
4931408C20Rik
Znrd1as
Znrd1
Nfkbiz
Mtf2
Glce
Ift46
Arcn1
Cpsf6
Ckap2
Pfdn5
Mcph1
Ireb2
Cct8
Gm3448
Gm3417
Tcte3
Ermard
Ska2
Prr11
Atf7
Ptcd2
Mrps27
Ect2
Slc25a4
Tardbp
Nudt1
Smarcd1
Cops4
Eif1ad
Banf1
Adgrf2
Usp3
Tfb2m
Cnst
Mrpl21
Ighmbp2
Ahctf1
Cnot8
Cox7a2
Nsun3
Insr
Atf2
Rpl7l1
Prdm10
Washc1
Xpc
Lsm3
Ttc14
Dnajc7
Nkiras2
Tmem107
Smc2
Hps6
Armh3
Exosc6
Slc35e3
Yod1
Pfkfb2
Rps28
Ppil1
BC004004
Sgms1
Ncbp2
0610012G03Rik
Kazald1
Dck
Ssbp2
Lyz1
Flcn
Sfi1
Eif4enif1
Ddx20
Slc39a9
Erh
Dicer1
Tomm22
Eif4g2
Mak16
Tbpl1
Mettl1
Eef1akmt3
Ddhd2
Taf12
Gm13285
Ifnz
Gm13276
Gm13278
Gm13277
Myef2
Cdkn2aipnl
Arid1a
Gm17019
Cmc2
Cenpn
Rraga
Creld2
Alg12
Rubcn
Fyttd1
Rbm25
Rab33b
Cdc25c
Gtse1
Slc35g3
Polr2a
Rap2b
Phf23
Gabarap
Rfwd3
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Ppm1l
Srp68
Rpn2
Mroh8
Pdia5
Ssrp1
P2rx3
Ankrd17
Smim10l1
Lrpprc
Wdr27
1600012H06Rik
Txnip
Ankfy1
Stat1
Spring1
Rnft2
Lsm5
C1qbp
Myl12a
Lyz2
Ddx42
Ccdc47
D16Ertd472e
Calm3
Smg8
Gtf3c6
Brpf1
Nup35
Kif20b
Rgl2
Tut7
Sod2
Ints13
Fgfr1op2
Gm10354
Kdsr
Micu3
Dbr1
Ndufa5
Asb15
Akr1b3
Tigd5
Eef1d
Zcchc4
H4f16
H2aj
Zfp113
Ska3
Mrpl57
Pxmp2
Pole
Fam133b
Gga1
Scamp1
Gfm1
H2bc6
H1f4
Wdr90
Tln1
Creb3
Fbxl14
Kpna1
T2
Il31ra
Tjp3
Pip5k1c
Olfr806
Iqch
Aagab
Phrf1
Abhd6
Prkdc
Cnot6
Mia2
Jag2
Gipc1
Gnai2
Por
Rita1
Ddx54
Taf15
Mcm4
Git2
Ankrd13a
Myh14
Prox2
Dut
Akirin1
Cbr3
Septin11
Slbp
Asah1
Ift27
Kctd2
Atp5h
Cln8
Sash1
Sspn
Vmn2r102
Aldh4a1
Ndufb1
Cpsf2
Cdiptos
Cdipt
Arntl
Ptov1
Atg12
Ap3s1
Uqcrh
Lrrc41
Madd
Dnmt1
Prkci
Itgb4
Ptdss1
Mterf3
Ptcd3
Polr1a
Eif3b
Psip1
Rmnd5a
Dlst
Eed
Rpl22
Mlst8
Hdac2
Tmem260
Fus
Arid4a
Uchl3
Rtn3
Arrdc4
Cenpe
Tada3
Arpc4
Ccdc85c
Lrrc56
Hras
Ndst2
Hyal2
Sp2
Cenpp
Nphp4
Noct
Kcnab2
Dohh
Fanci
Ly6g6f
Calml3
Abhd16a
Tst
Mpst
Fgd4
Pknox1
Atrnl1
Igsf8
Cd164
Galnt10
Fbxo33
Wasl
Gnb2
Diaph1
Polg
BC005537
Map7d1
Ajuba
Inka1
Flad1
Slc14a2
Dhrs3
Pik3r3
Sec14l1
H2-DMa
Brd2
Znhit1
Plod3
Lsg1
Raly
Ss18
Uros
Bccip
Bcl6
Rpl19
Cacnb1
Ppp1r13l
Srxn1
Smc3
Junb
Dgat2
1700016H13Rik
Ap2m1
Pkia
Rps27l
Rps29
Sharpin
Maf1
Gm35339
Pfdn4
Mat2a
Top2a
Ankrd54
Mtss2
Fam227a
Cby1
Zfp219
Tmem253
Cd3eap
Ube2b
Cdkl3
Eif2ak3
Cwc27
Arl2
Fam20b
Tcp11l2
Ephb2
Rhbdd3
Ewsr1
Dot1l
Rfx1
Nemf
Atp6v0c
Phlda3
Myadm
Paxip1
Cdca7l
Abhd2
Bzw2
Ankmy2
Hnrnpc
Mblac1
Trir
Get3
Ccser2
Mapk8ip1
Rlbp1
Per2
Ttll7
Cdt1
Selenow
Nmral1
Dpp9
Rnasek
0610010K14Rik
Tecpr1
Slc39a3
Tepsin
Ndufaf8
Pa2g4
Rnf5
Agpat1
Cnot1
Atp5b
Lfng
Apobec2
Smim4
Nt5dc2
Smg9
Ifna13
Robo1
Evpl
Akt2
Trip10
Mtmr14
Gpr108
Tmem218
Cic
Nt5c3
Rarg
Ttll10
Ilf2
Sema3b
Rbbp9
Tbc1d17
Akt1s1
Dnm2
Rab5b
Osbp
Rpl27
Zmynd8
Khsrp
Cul2
Slc35e2
Them6
Prr19
Pafah1b3
Tcerg1
Wasf1
Cdc40
Spsb3
Nubp2
Plekha1
Ube2c
Tmem41b
Kctd14
Tjp2
Tom1
Dhx32
G3bp1
Frat1
Hrc
Arhgef4
Fstl3
Oxr1
Cspp1
Cops5
Mfsd8
Zfp24
Zscan25
Frat2
Niban2
Oacyl
Oasl1
Zfp821
Zfp143
Cytl1
Pip4k2b
Gjc3
Zfp869
Sigmar1
Slc14a1
Sh2d5
Rtkn
Paip2b
Aig1
Inip
Fam149b
Ecd
Tmem250-ps
Prpf40a
Arl6ip6
Tcp11
Rin2
Lemd1
Plekhh2
Atg16l2
Rbbp6
Nfatc2ip
Sp1
Fkbp3
Fancm
Nfe2
Mrps11
Mrpl46
Smim38
C1qtnf6
Limch1
Camta1
Cltc
Sh3kbp1
Rab11b
Rusc2
Otogl
Ankhd1
Fchsd2
Susd6
Rab21
Aadacl2fm1
Bcl9l
Ap3m2
Hexim1
Spc25
G6pc2
Klk11
Klk10
Clasp2
Nudt2
Kif24
Mgrn1
Rab28
Dap3
Rel
Zcchc14
Abhd18
Gm5165
Isy1
Clic4
Traf2
Cct5
Atpsckmt
Lrch4
Fbxo24
Gopc
Ss18l2
Rgs3
Uchl1
Spty2d1
Fam89a
Zswim4
Vwa1
Kremen1
Anln
9530077C05Rik
Mis12
Derl2
Slc30a5
Utp18
Mbtd1
Gstp2
Nol6
Arhgap19
Tle3
Prkaca
Fam110b
Meis1
Uba1
Tnrc6b
Plekhb1
Nacc2
Cst6
Frmd6
Med23
Jun
1700034J05Rik
Stip1
Klhl21
Irf2bp2
Nr6a1
Fbxo9
Cobll1
Cilk1
Smim17
Limk2
Zfp687
Kmt5c
Aph1b
Katnb1
Fam227b
Dtwd1
Mllt11
Cdc42se1
Tctn2
Srgap2
Fam72a
Smarcal1
Glrx5
Nepn
Zfp383
Zfp27
Rab4b
Mia
Hexa
Letm1
Mrps31
Zfp526
Dedd2
Cdca8
9930104L06Rik
Tspan4
Polr2l
Dchs2
Col9a2
Fam83b
Crybg1
Tmem94
Zfyve21
Xrcc3
Hdac1
Atp8a1
Myl12b
Mbnl2
Cfap77
Pin1
Wnt10b
Fam204a
Tmem198b
Med30
Dnajc14
Pan2
Dbp
Car11
Banp
Evi5l
Bricd5
Slc29a1
Mymx
Fam3c
Rasip1
Gm5591
Dst
Zfp385b
Adnp
Hexim2
Copz1
Ltbp4
Zfp748
Parpbp
Nup37
Armc1
Zfp532
Id2
Zxdc
Chic2
Tacc1
Zbtb40
Nlk
Spns2
Edrf1
Psmb3
Pcgf2
Mtus1
Zdhhc5
Gm33887
Arhgef19
Aff1
Pygo2
Ddx56
Mrpl1
C1d
Prrt1
Ppt2
Kpnb1
Mvk
Mmab
Fer
Ttyh2
Rpl38
Knl1
Mtch2
Fam53b
Folr2
Uqcrq
Gdf9
Pou2af1
Mrpl30
Mitd1
Ube2a
Ngdn
Samd4b
Malt1
Gmfg
Arf2
Usp20
BC005624
Pmaip1
Calcoco1
Wdr36
Serpinb5
Ss18l1
Psma7
Rab40c
Mrpl44
Zfp648
Slc25a42
Bbs2
Sh3glb2
Miga2
Tpt1
Nedd4
Ergic1
Eea1
Uvssa
Cgref1
Abhd1
Slc36a4
Sh3bp1
Glo1
Mfsd13b
Cdr2
Fry
Palb2
Dctn5
Nectin3
Kif13b
Frmd4b
3110082I17Rik
Adssl1
Hbp1
2900026A02Rik
Dhrs13
Fyn
Lars
Sncg
Mmrn2
Akap11
Dcps
Klk9
Cnot3
Zfp574
Ttc41
Hsp90b1
Grik5
Stt3a
Mmp15
Zfp386
Tfg
Zfp277
Dock4
Wasf2
Sgms2
Ist1
Lama4
Sox5
Map4k4
Sppl2a
Chchd2
Nfatc1
Emp1
Immp1l
Elp4
Crtc1
Plekhg1
Tbck
Aimp1
Micall1
Nvl
Castor1
Rps7
Scn4b
Tmcc3
Rara
Inava
Ift140
Fsbp
Cramp1l
Pnn
Dhx33
Znhit3
Col7a1
Adgrv1
Ttf1
Cyth1
Papss2
Rnf26
Hes2
Got1
Tubb4b
Utp3
Adgra3
Wdfy2
Chordc1
Ablim1
Wrap53
Trp53
Spata17
Gpatch2
Srf
Tmco3
Sel1l
Dcun1d2
Tmem101
Kat6b
Rnase4
Ang
Met
Gm51425
Zfp607b
Aebp2
Sema4b
Zfp692
Tut4
Ppp6r3
Ap2a1
Timm17b
Pqbp1
Sri
Fosl1
Fmod
Fdft1
Dcp1a
Rnf14
Bmp4
Duxbl3
Duxbl2
Duxbl1
Cd47
Mef2a
Drg2
Pdss2
Hspg2
Prmt1
Ubald2
Lancl2
Nlrp10
Eif3f
Commd1
Myo6
Tut1
Sun1
Fdxr
Nuf2
Get4
Sema4d
Cstf2t
Ncaph
Nup54
Dapk3
Krr1
Anapc5
Syn1
Me1
Snrnp200
Mindy2
1810024B03Rik
Col9a1
Anp32e
Yipf2
Timm29
Polr3g
Mfsd4b4
Mblac2
Bod1l
Xrcc1
Pinlyp
Fbxw7
Mast2
Col6a1
Marcksl1
Dcaf7
Oat
Srpk2
Uhrf2
Opa1
Ndrg1
Plekhf2
Map4k5
Atl1
Kdm4a
Rnaseh2a
Prdx2
Hars
Hars2
Cd300c
Sacm1l
Farp1
Pxmp4
Nudcd2
Hmmr
Sphk2
Rpl18
Kifap3
Fam83e
Izumo1
Trib1
Gripap1
Ptger1
Mideas
Il17rb
Chdh
Ube2j2
Pitx3
Gbf1
Fem1b
Itga5
Gfpt1
Gpsm2
Cdyl
Gpaa1
Exosc4
Srp19
Tmx2
Med19
Foxp2
Cep63
Anapc13
Tmem262
Clmn
Pak6
Tfap2a
Ints4
Gatad2a
Veph1
Rptor
Plcd1
Phldb1