ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1035108 | Chondrocytes
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◣ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

Igsf8
Sec14l1
Plekhh2
Tmem250-ps
T2
Klk11
Klk10
Slc14a2
Mtss2
Gjc3
Gnai2
Calml3
Zfp385b
Myadm
Myh14
Dhx32
Aig1
Fam89a
Rbm25
Lemd1
Fam110b
Clic4
Sh2d5
Mtus1
Nt5c3
Oacyl
Nacc2
Cytl1
Ap2m1
Cst6
Itgb4
Rin2
Slc14a1
Gstp2
Rpl27
Cldn34d
Adssl1
Prox2
Zfp532
Ccser2
Folr2
Ttyh2
Rpl38
Map4k4
Sppl2a
Klhl21
Col9a2
Fry
C1qtnf6
Sh3kbp1
Dhrs3
Qpct
Hexa
Plekhb1
Arhgef1
Chic2
Map4k5
Atl1
Fmod
Klk9
Kif13b
Plcd1
Pmepa1
Slc29a1
Mymx
Tmco3
Dcun1d2
Cd300c
H2-DMa
Brd2
Dhrs13
Tut4
Smg9
Hsd11b1
Tanc1
Fgd4
Prss22
Mrps31
Mast2
Dlc1
Lsg1
Arsg
Sppl3
Fam53c
Rpl22
Phrf1
Anln
9530077C05Rik
Ttll10
Pdss2
Ltbp4
Anks1b
Smim17
Emp1
Frmd4b
Arf2
Ubtd1
Mms19
Denr
Gm14461
1700034J05Rik
Dohh
Zfp648
Adgra3
Paip2
Tnfrsf26
Col11a1
Asgr1
Mllt11
Cdc42se1
C1qtnf3
Kpna1
2310061N02Rik
Ss18l2
Farp1
Gm33887
Prf1
Arntl
Spns2
Itga5
Arhgap19
Ankrd54
Kctd4
Mfn2
Fam53b
Ptger1
Gm973
Bin3
Zfp24
Sgms2
Gramd1b
Uqcrh
Lrrc41
Ltbp1
Tmem144
Mid2
Cgref1
Abhd1
Tjp2
Zmynd8
Dhx33
Stra8
Col6a1
Slc25a45
Frmd8
Lama4
Il17rb
Chdh
Ank1
Cobll1
Phyhd1
Emb
Prss53
Ddx56
Echdc3
Krt79
Scube2
Sulf1
Sec14l2
Rnase10
Ppil3
Nif3l1
Pycrl
Slc22a20
Arrdc4
Kcnmb3
Prkdc
Mcm4
Bnip2
Clmn
Cd9
Ppat
Paics
Top2a
Cldn18
Cdyl
Cenpu
Wdr36
Tbc1d10a
Uvssa
Tiam2
Slc39a14
Pou2af1
Pak6
Hrob
St3gal3
Il18
Bco2
Tmcc3
Aox1
Me1
Dok5
Ibtk
Pkn3
Arl6ip5
Nvl
Dgkd
Gfpt2
Fgfrl1
Zfp386
Col6a3
Inf2
Septin9
Msh3
Dhfr
Has1
Pdlim4
Fem1b
Dtx1
Slc2a9
Chordc1
Nlrp10
Eif3f
Polg
Gstm6
Rapgef1
Krr1
Utp3
Fam107b
Mrpl1
Gsn
Fam169b
Apobec2
Nt5e
Gast
Mrpl21
Ighmbp2
Parpbp
Nup37
Isy1
Mad1l1
Aldh4a1
Mmp15
Cdk5rap2
Sox6
Rbp3
Spty2d1
Zfp748
Vta1
Tfg
Taf15
Mest
Ift27
Plcb2
Rhoc
Emilin3
Znhit1
Plod3
Rtn4
Crb2
Nfatc2ip
Tex14
Sp2
Tmem218
Eppk1
Adamtsl4
Slc39a3
Ppp2ca
Tmem41b
Gm829
Hnrnpc
Adgra1
Med23
C77080
Dsg2
Tcerg1
Col27a1
Kdm1a
Cic
Pdzrn4
Dcp1a
Vps28
Lims2
Mgat4a
Gpaa1
Exosc4
Snx18
Ccn4
Slc35e3
Drg2
Angptl4
Meltf
Igfbp1
S100a3
Ngef
Mrpl30
Mitd1
Fam25c
Ska2
Prr11
Mtus2
Arid4a
Rnf11
Ptcd2
Mrps27
Rnf5
Agpat1
Kctd14
Il31ra
Lrpprc
Fosb
Rita1
Ddx54
Fyn
Ints1
Sox8
Aebp2
Tubgcp6
Hdac10
Mbp
Tardbp
Flad1
Sun1
Timm10
Smtnl1
Anapc5
Mideas
Hyal2
Prss45
Dcn
Aadacl2
Khsrp
Cstf2t
Rab31
Madd
Lats2
Ube2f
Psmd3
Eed
Tut1
Dusp12
Ppp6c
B4galt7
Cracd
Prcc
Rbbp9
Ints10
Snrnp200
1810024B03Rik
Ndufv1
Wwox
St6galnac6
Nedd4
Nkd1
Kdsr
Atp10a
Piezo1
Rfx1
Fam149b
Ecd
Slc35d1
Rab11b
Phyhip
Mat2a
Rps7
Tnn
Calm3
Furin
Gm1604b
Ric8b
Arfgef2
Rnase4
Ang
Smg8
Tcea3
Zfp869
E230025N22Rik
Gnb4
Gm5165
Ywhaq
Gsto2
Tmem101
Marcksl1
Ap4e1
Panx3
Cln8
Slc35e4
Glo1
Olfr12
Galk2
Cops2
Atg101
Ddx20
Itgb3
Wdfy2
Taf12
Trub2
Rab21
Trib1
Irf2bpl
Zbtb40
Pacsin2
Gucy2g
Mrpl44
Tubb5
Mdc1
Card19
Casp6
Fdxr
Gtf2h4
Knl1
Htra2
Dqx1
Aup1
Numb
Sema3b
Smim3
Hexim2
Mcm3
Snrpc
Nelfa
Map3k5
Ing4
Dhx8
Lgals3
Zfp169
Rptor
Creb5
Mgp
Lmna
Dennd1b
Fam180a
Rgs3
Rab4b
Mia
Rock2
Map3k14
Arpc1b
Zfp738
Zfp821
Ist1
Iqch
Aagab
Cct8
Lgals7
Zbtb2
Srp19
S100a10
Dock1
Cdt1
Lmtk2
Ppp1r11
Pole2
Stk3
Atp6v0a4
Atg12
Ap3s1
Slc33a1
Rhoq
Dad1
Abhd4
Slc27a6
Ehd3
Dhx16
Capns1
Hdac2
Get1
Dnajc16
Casp9
Nr1d1
Gcnt2
Tnp2
Socs1
Prm3
Proser2
Krt13
Plec
Atp5b
Nos3
Nuf2
Sertad4
Tns2
Clk4
BC049762
Wdr48
Bms1
Mapre2
Rtn3
Otogl
B3gnt5
Gjb5
Gjb4
Prkci
Ltbp3
Jam2
Armc1
Acp2
Txnl4b
Dhx38
Inka2
Ndufv2
Cavin1
Myo5c
Fhl2
Col9a1
Sphk2
Rpl18
Fam83e
Wdr92
Pno1
Mtmr2
Rab5b
Osbp
Arl10
Alkbh4
Cldn10
Ube2j2
Usp4
Yipf2
Timm29
Map9
Gsg1
Tmem260
Dffb
Cep104
Tead4
Tmem63a
Nop14
Grk4
Diaph1
G3bp1
Kifc5b
Rbm34
Mgl2
Irf2bp2
Dusp22
Mtmr6
Ptov1
Eps8l2
Deaf1
1190005I06Rik
Postn
Ing3
Krtap1-5
Krtap1-4
Cltc
Hal
Zmat5
Uqcr10
Eif3b
Ugdh
Mmachc
Ccdc163
Por
Ergic1
Katnb1
Gpd1
Gprc5a
Cblb
Ccn2
Bgn
Banp
Car5a
Prrg2
Nosip
Cmklr1
Xpo7
Dpp9
Acot7
Prss56
Lrriq3
Fpgt
Ssbp1
Alg14
Btbd9
Hspg2
Arid1a
Adcy4
Rcan1
Neil2
Inhba
Ints4
Sgcd
C2cd5
Acsl1
Krt16
Ubxn10
Limd1
Cav1
Arhgap11a
Nufip2
Dhrs9
Pkp2
Tulp4
Txndc2
Nup54
Ruvbl1
Filip1
Lzts2
Stard13
Papss2
Ahcyl2
Col5a3
Adipor2
Plekha5
Kcnk3
Slc39a2
Trp53rkb
Srp72
Gipc1
Eif2ak3
Dot1l
Znhit3
Zbtb5
Atp5g2
Ost4
Ndufs2
Adamts4
Emilin1
Xab2
Pet100
Pcp2
Rps12
Cdsn
Micalcl
C130050O18Rik
F13a1
Dnajc24
Alx1
Dut
Ndufb1
Cpsf2
BC005537
Opa1
Egr2
Gm13285
Gm13290
Gm13289
Gm13288
Gm13287
Upp2
Tnfaip6
Guca2b
Cdc25c
Tspan6
Nr2c2ap
Sirt2
Nfkbib
Mfsd8
Ddost
Srxn1
Dnm2
Tma16
Megf8
Cela1
Vpreb1
Top3b
Mrgpre
Gfpt1
Rcc2
Rnf181
Rab3a
Sirt4
Dars2
Rdm1
Anxa8
Frmd4a
Plekhf1
Mrap
Ngdn
Tubb6
Ppfibp1
Hip1
Fmnl3
Anxa1
Kctd5
Timm22
Cacng2
Bdkrb2
Zbtb38
Uchl3
Nfe2l1
Rangap1
Dync1li1
Stard3
Ppp1r1b
Cdk12
Dus1l
Dbi
Lcmt1
Rrp15
Xylt1
Timm21
Fbxo15
Mlst8
Tmem94
Zfp317
Cmc2
Cenpn
Veph1
Cops4
F3
Cep295nl
Efna5
Ifnz
Gm13276
Gm13272
Hsd17b12
1110051M20Rik
Rab11fip3
Cxcl2
Cbx5
Cops8
Mt2
Gkn3
Fut10
Med4
Trp53bp2
Sh2d1b1
Stat3
Rbbp5
Yap1
Pitx3
Gbf1
Rsad1
Vwa3b
Syne3
Cetn4
Bbs12
Tnks1bp1
Evi2a
Evi2
Zscan22
Pde12
Evi5l
Abcc4
Tmem154
Colgalt2
Taco1
1600014C23Rik
Gprc5b
Ttc1
Dnaic2
Sec22b
Sbk3
Kif12
Chchd2
Tmem262
Vps51
Sf3a3
Lemd2
Cdca8
9930104L06Rik
Lman1
Tpsg1
Clcn3
Rrm1
Csgalnact1
Mical1
Klhl20
Sf3b2
Gal3st3
Defb20
Tox4
Rab2b
Appbp2
Spata13
Kifap3
Pafah2
Rmc1
Haus6
Dnmt1
Trir
Get3
Cct5
Atpsckmt
Kmt5c
Smarcal1
Gulo
Slc41a1
Zfp217
Slc4a8
Traf3ip2
Ppp1r13l
Cd3eap
Lrrfip1
Ndufs7
Hk2
Sfxn3
Pdzd7
H1f8
Loxl1
Slc6a9
Shpk
Ctns
Nol6
Sh3gl1
Chaf1a
Daam1
Psmb3
Pcgf2
Ruvbl2
Gys1
Surf6
Aplf
4932438H23Rik
Rarg
Kifc1
Fbxo42
Hars
Hars2
Mrpl34
Dda1
Abhd8
Prkcsh
Ccdc151
Galnt10
Gpsm2
Esyt2
Cacybp
Tti2
Dlx2
Spata1
Gng5
Pin1
Tmem107
Rpl3
Lrrc51
Tbc1d10b
Mylpf
4930432M17Rik
Prr19
Pafah1b3
Brwd3
Slc45a4
Nme1
Rmnd5a
Gpc6
Cfap44
Cnpy1
Ddx18
Gosr1
Tmcc1
Glrx5
Tcf3
Trp53rka
Tm4sf1
Npc1
Gm3776
Cradd
Slc6a12
Cdiptos
Cdipt
Glce
Plekhf2
Polq
Prmt5
Rpl19
Cacnb1
Dtnb
Nfkbil1
Atp6v1g2
Rsbn1
Tmem170b
Zfp747
Krt78
Ngf
Eif5
Ylpm1
Bmf
Ncor2
Ncmap
Cipc
Zfp35
Chchd3
Cnmd
Cenpp
Ablim1
Tbl1x
Poglut2
Bivm
Prss46
Lars
Bod1l
Lrig2
Gjb3
Prdm10
Mbnl1
Xrn1
Fbln7
Slc39a13
Frg1
Dock8
Diras2
Gale
Kcnk10
Hoxa6
Hoxa5
Upf1
Zbtb7c
Tepsin
Ndufaf8
Tcea1
Tm9sf4
Gm9949
Adrb2
Fam102b
Zfp408
Arhgap1
Cxcl17
Tsc22d3
Nr4a2
Tigd5
Eef1d
Kcnn4
Itih5l-ps
Uqcrc1
P2rx6
Lrrc74b
Retsat
Elmod3
Zfp719
Pate1
Jmjd1c
Cox14
Srp68
Irgq
Emsy
Paip2b
Cast
Riok2
Mdm4
Ascc2
Atp5g3
Gcnt4
Clasp2
Zfp180
Unkl
Percc1
BC003965
Wdr24
Zfp330
Pxmp4
Cnpy2
Tpm2
Lgals2
Gtpbp3
Ano8
Shb
Selenok
Ipcef1
Arid4b
Pcnx3
Map3k11
Agpat4
Zfp472
Foxo6
Smim4
Nt5dc2
Cyth2
Bfsp1
Abhd2
Limch1
Ttc30b
Pigu
Herpud2
Ddx24
Nav2
Sharpin
Maf1
Gm35339
Chst11
Uqcrq
Gdf9
Elk3
Yars
S100pbp
Pigm
Fubp3
Ccn3
Vmn2r102
Rag2
Iftap
Cd2bp2
Wdr77
Atp5pb
Pex3
Adat2
Ints12
Gstcd
Ppme1
C2cd3
Btbd19
Txn2
Col20a1
Crybg1
Mob1a
Nudt15
Ciao3
Ilf3
5031439G07Rik
Nsfl1c
Ndufaf1
H3f3c
Cmtm3
Noxa1
Abhd18
Phb
4930558K02Rik
Pigc