ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX028800 | Embryonic gonad
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◣ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

Wdr77
Atp5pb
Cldn34d
Ptcd3
Polr1a
Rpl19
Cacnb1
Calm3
Cdk12
Ift27
Pknox1
Qrich1
Pik3r3
Phrf1
Arntl
Arid4a
Sharpin
Maf1
Gm35339
Pfdn4
Septin11
Tcp11l2
Tada3
Arpc4
Fus
Lrpprc
Cmc2
Cenpn
Cdiptos
Cdipt
Trir
Get3
Prkdc
Mcm4
Gipc1
Uchl3
Mat2a
Top2a
Dgat2
Taf15
Denr
Flad1
BC005537
Tigd5
Eef1d
Inip
Cenpe
Uqcrh
Lrrc41
Hyal2
Mblac1
Dcun1d4
Tardbp
Mlst8
Dut
Mapk8ip1
Psmd5
Cutal
Eif3b
Ptcd2
Mrps27
Nr6a1
Dnm2
Cnot6
Por
Camta1
Rita1
Ddx54
Hexim1
Mgrn1
Srf
Dohh
Tepsin
Ndufaf8
Ap3m2
Mfsd13b
Cdr2
Prkci
Slc39a3
Wdr27
1600012H06Rik
Gnb2
Tctn2
Zswim4
Aldh4a1
Tmem218
Arrdc4
Mrps11
Mrpl46
Jun
Ppm1l
Lsg1
Atg101
Slbp
Tbc1d17
Akt1s1
Nphp4
Kcnab2
Cnot1
Sp2
Mia2
Dpp9
Dnmt1
Sash1
Styxl1
Mdh2
Tom1
Rhbdd3
Ewsr1
Ube2d3
Uros
Bccip
Fam227a
Cby1
Smim10l1
Hnrnpc
Cln8
Hs3st3a1
Eif2ak3
Abhd2
Ube2c
Tmem260
Atp5b
Mapk14
Slc26a8
Asah1
Eed
Ptdss1
Mterf3
Wasf1
Cdc40
Ankrd54
Prmt1
Rmnd5a
Atrnl1
Noct
Zfp383
Zfp27
Rbm39
Uhrf2
Gm12258
Trip10
Gpr108
Traf2
Arap1
Prkaca
Ttll7
Hrc
Psip1
Ankhd1
Pkia
Oxr1
Tmem102
Fgf11
Chrnb1
Elavl2
Eif4a3
Rpl22
Ttc41
Hsp90b1
Cdc25c
Fam76a
Ndufb1
Cpsf2
Ptov1
Tst
Mpst
Selenop
Rnf5
Agpat1
Samd4b
Gmfg
Nucb2
Cep135
Ncoa2
Map7d1
Naa35
Slc25a4
Hydin
Smc3
Frat1
Nudt2
Kif24
Rtn3
Nectin3
Ankfy1
Prr19
Pafah1b3
Mvk
Mmab
C1d
Selenow
Rps6ka5
Fbxo33
Ddx19b
Aars
Rtkn
Bcl6
Pin1
Siah1b
Nsun3
Lrch4
Fbxo24
Fanci
Rps7
Tspyl1
Pias2
Glrx5
Tmem198b
Dnajc14
Hdac2
Kmt5c
Chd6
Ccdc85c
Raly
Tmbim6
Per2
Tcerg1
Paip2b
Kctd2
Atp5h
Usp1
Pawr
Rpl12
Lrsam1
Robo1
Pxmp4
Cwc27
Hspa4
Polg
Tnrc6b
Pan2
Med30
Nol6
Cd164
Wnt3
Srpk2
Rab28
Zbtb40
Rab5b
Timm17b
Pqbp1
Tipin
Fchsd2
Dnajb4
Fubp1
Atf7
Sel1l
Zswim1
Mtmr14
Gm5165
Atp8a1
Khsrp
Eif5
Mob1a
Ift22
Sufu
Actr1a
2310022A10Rik
Madd
Cenpp
Cic
Sos2
Rnpc3
Oscp1
Fam204a
Stip1
Cfap77
Ttf1
Timeless
Tmem209
Ssmem1
Utp18
Mbtd1
Pip4k2b
Calcoco1
2610008E11Rik
Kat6b
Fdft1
Kansl2
Rpp38
Acbd7
Iqch
Aagab
Zfp687
Lamp1
Sipa1l1
Canx
Sarnp
Ormdl2
Isoc2b
Add1
Sec23ip
Mcmbp
Hdac1
P2ry2
Gripap1
Spsb3
Nubp2
Nudt1
Ly6g6f
Abhd16a
Ska2
Prr11
Mis12
Derl2
Wrap53
Trp53
Kdm4b
Zfp691
Myl12a
Pycr2
Micos10
Srgap2
Fam72a
Ephb2
Cct5
Atpsckmt
Psmb2
Mucl3
Sh3glb2
Miga2
Wdr6
Paxip1
Prpf40a
Arl6ip6
Uba1
Rraga
Immp1l
Elp4
Rlim
Tle2
Uqcrq
Gdf9
Scamp5
Supt5
Meis1
Zfp574
Grik5
Spag8
Hint2
Gm20346
Anp32a
Srarp
Stxbp4
Cox11
Hnrnpr
Edrf1
Maco1
Tjp3
Pip5k1c
Uchl1
Uhrf1bp1
Galnt10
Wbp1
Ino80b
Rbm15
Bpgm
Acat2
Git2
Ankrd13a
Zfyve21
Xrcc3
Bub1
Pold4
Ptch1
Frem3
Ttbk2
Tmprss3
Prdm10
Smarcal1
Dcaf11
Ss18
Nudcd2
Hmmr
Flcn
Recql
Golt1b
Nr5a1
Rpusd3
Rbm27
Relch
Pign
Cemip
Rps19
Tbccd1
Dnajb11
Palb2
Dctn5
Zbtb5
Xrcc1
Pinlyp
Ensa
Tmem88
Naa38
Cyb5d1
Zfand3
Zfp143
Hbp1
Junb
Katnb1
Gm17019
G3bp1
Tubb4b
Dcaf7
Kdm4a
Fam222a
Sp1
Speer4e
Rcl1
Narf
Zfp869
Rpn2
Mroh8
Glce
Ppp6r3
Ap2a1
Rfx1
Psmb3
Pcgf2
Cfap73
Orai3
Ppm1b
Dcps
Kctd9
Cdca2
Gatad2a
Dbp
Car11
Ubald2
Osbp
Evi5l
Rps6ka2
Rab11b
Sult6b2
Kpna1
T2
Il31ra
Olfr806
Wwox
Abhd6
Jag2
Fam53c
Gnai2
Myh14
Prox2
Akirin1
Cbr3
Tmem125
Sspn
Vmn2r102
Kmt2a
Atg12
Ap3s1
Itgb4
Dlst
Lrrc56
Hras
Ndst2
Sod2
Calml3
Fgd4
Igsf8
Wasl
Diaph1
Ajuba
Inka1
Slc14a2
Dhrs3
Sec14l1
H2-DMa
Brd2
Znhit1
Plod3
Ppp1r13l
Srxn1
1700016H13Rik
Arhgef1
Ap2m1
Rps27l
Rps29
Mtss2
Zfp219
Tmem253
Cd3eap
Ube2b
Cdkl3
Arl2
Fam20b
Dot1l
Nemf
Atp6v0c
Phlda3
Myadm
Bzw1
Cdca7l
Bzw2
Ankmy2
Rbm25
Ccser2
Mtf2
Rlbp1
Cdt1
Nmral1
Rnasek
0610010K14Rik
Tecpr1
Pa2g4
Cenpu
Lfng
Apobec2
Smim4
Nt5dc2
Smg9
Ifna13
Evpl
Akt2
Nt5c3
Rarg
Ttll10
Ilf2
Sema3b
Rbbp9
Rpl27
Zmynd8
Cul2
Slc35e2
Them6
Plekha1
Fbxl14
Tmem41b
Kctd14
Tjp2
Dhx32
Arhgef4
Fstl3
Cspp1
Cops5
Mfsd8
Zfp24
Zscan25
Frat2
Niban2
Oacyl
Oasl1
Zfp821
Cytl1
Gjc3
Mrpl21
Ighmbp2
Sigmar1
Slc14a1
Sh2d5
Aig1
Fam149b
Ecd
Tmem250-ps
Tcp11
Rin2
Lemd1
Plekhh2
Atg16l2
Rbbp6
Nfatc2ip
Fkbp3
Fancm
Sfi1
Nfe2
Smim38
C1qtnf6
Limch1
Cltc
Sh3kbp1
Rusc2
Sgms1
Otogl
Ttc14
Susd6
Rab21
Aadacl2fm1
Bcl9l
Spc25
G6pc2
Klk11
Klk10
Clasp2
Dap3
Rel
Zcchc14
Abhd18
Isy1
Clic4
Gopc
Ss18l2
Rgs3
Spty2d1
Fam89a
Vwa1
Kremen1
Anln
9530077C05Rik
Slc30a5
Tex14
Cwc22
Gstp2
Arhgap19
Tle3
Fam110b
Plekhb1
Nacc2
Cst6
Frmd6
Trim41
Med23
1700034J05Rik
Klhl21
Irf2bp2
Fbxo9
Cobll1
Cilk1
Smim17
Limk2
Aph1b
Fam227b
Dtwd1
Smg8
Mdm2
Mllt11
Cdc42se1
Nepn
Proser1
Nhlrc3
Rab4b
Mia
Hexa
Ireb2
Letm1
Mrps31
Zfp526
Dedd2
Cdca8
9930104L06Rik
Tspan4
Polr2l
Dchs2
Col9a2
Fam83b
Crybg1
Tmem94
Myl12b
Mbnl2
Wnt10b
Haspin
Banp
Bricd5
Baz2a
Slc29a1
Mymx
Fam3c
Rasip1
Gm5591
Dst
Zfp385b
Adnp
Hexim2
Copz1
Ltbp4
Slc35e3
Zfp748
Parpbp
Nup37
Armc1
Zfp532
Xpc
Lsm3
Id2
Zxdc
Cct8
Chic2
Tacc1
Nlk
Spns2
Mtus1
Zdhhc5
Gm33887
Arhgef19
Aff1
Pygo2
Ddx56
Mrpl1
Prrt1
Ppt2
Kpnb1
Hnrnpa2b1
Cbx3
Fer
Ttyh2
Rpl38
Knl1
Slc35g3
Polr2a
Mtch2
Ints10
Fam53b
Folr2
Pou2af1
Mrpl30
Mitd1
Ube2a
Ngdn
Malt1
Arf2
Usp20
BC005624
Pmaip1
Wdr36
Serpinb5
Ss18l1
Psma7
Rab40c
Mrpl44
Zfp648
Slc25a42
Bbs2
Tpt1
Nedd4
Ergic1
Eea1
Uvssa
Cgref1
Abhd1
Slc36a4
Sh3bp1
Glo1
Fry
Kif13b
Frmd4b
3110082I17Rik
Dffb
Cep104
Adssl1
2900026A02Rik
Dhrs13
Fyn
Lars
Sncg
Mmrn2
Akap11
Klk9
Cnot3
Slc25a25
Naif1
Stt3a
Ssrp1
P2rx3
Mmp15
Zfp386
Tfg
Zfp277
Dock4
Wasf2
Sgms2
Ist1
Lama4
Sox5
Map4k4
Sppl2a
Chchd2
Nfatc1
Emp1
Crtc1
Plekhg1
Tbck
Aimp1
Micall1
Nvl
Castor1
Fut10
Scn4b
Tmcc3
Rara
Inava
Ift140
Fsbp
Cramp1l
Pnn
Dhx33
Rab33b
Znhit3
Col7a1
Adgrv1
Cyth1
Slc39a10
Spdl1
Papss2
Rnf26
Gm51573
Hes2
Got1
Utp3
Adgra3
Wdfy2
Chordc1
Ablim1
Spata17
Gpatch2
Tmco3
Dcun1d2
Tmem101
Rnase4
Ang
Met
Gm51425
Zfp607b
Aebp2
Sema4b
Zfp692
Tut4
Sri
Fosl1
Fmod
Dcp1a
Rnf14
Bmp4
Duxbl3
Duxbl2
Duxbl1
Cd47
Mef2a
Drg2
Pdss2
Hspg2
Lancl2
Nlrp10
Eif3f
Commd1
Myo6
Tut1
Sun1
Fdxr
Nuf2
Get4
Sema4d
Cstf2t
Ncaph
Nup54
Dapk3
Krr1
Anapc5
Syn1
Me1
Kdsr
Snrnp200
Mindy2
1810024B03Rik
Col9a1
Anp32e
Yipf2
Timm29
Polr3g
Mfsd4b4
Mblac2
Bod1l
Fbxw7
Mast2
Col6a1
Marcksl1
Oat
Opa1
Ndrg1
Zfp646
Plekhf2
Map4k5
Atl1
Rnaseh2a
Prdx2
Hars
Hars2
Cd300c
Sacm1l
Farp1
Sphk2
Rpl18
Kifap3
Fam83e
Izumo1
Trib1
Ptger1
Mideas
Il17rb
Chdh
Ube2j2
Pitx3
Gbf1
Fem1b
Itga5
Gfpt1
Gpsm2
Cdyl
Gpaa1
Exosc4
Srp19
Tmx2
Med19
Foxp2
Cep63
Anapc13
Ift46
Tmem262
Clmn
Pak6
Tfap2a
Ints4
Veph1
Rptor
Plcd1
Phldb1
Cipc
Mtres1
Dlc1
Arid1a
Qpct
Cyth2
Tanc1
Dnajc16
Casp9
Vpreb1
Top3b
Ankar
Lrriq3
Fpgt
Slc33a1
Nufip1
Gpalpp1
Esyt2
Zbtb18
Phyhd1
Sec14l2
Prss22
Ndufa4l2
Mcm3
Ube2f
Chadl
Arpc1b
Ssbp1
Pmepa1
Eapp
Smim14
Galk2
Cops2
Pkn3
Birc2
Rgl2
Ahctf1
Abtb2
Echdc3
Zfp668
Xab2
Wdr92
Pno1
Pet100
Pcp2
Tbc1d10a
Mocs3
Dpm1
Polq
Ier5
Septin7
Lgals7
Ric8b
Bms1
Zbtb3
Polr2g
Klhl26
Spring1
Rnft2
Stat3
Map3k3
Sox9
Asgr1
Get1
Gas7
Tnfrsf26
Timm10
Smtnl1
Scamp1
F13a1
Tcf3
Pabpn1
Zzz3
Taf12
Jpt2
Zfp637
Zfp513
Il18
Ddost
Bco2
Hip1
Slc4a2
Ndufs7