ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1271842 | Embryonic limb
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◣ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ Sox9: STRING

Kpna1
Cldn34d
T2
Gopc
Nepn
Il31ra
Phrf1
Mia2
Dnmt1
Ptcd2
Mrps27
Prkdc
Mcm4
Cd164
Ift27
Tjp3
Pip5k1c
Rita1
Ddx54
Sod2
Uchl1
Mapk8ip1
H2-DMa
Brd2
Muc3
Fam53c
Rpl22
Asah1
Olfr806
Git2
Ankrd13a
Duxbl3
Duxbl2
Duxbl1
Taf15
Tmem125
Abhd6
Tacc1
Bzw2
Ankmy2
Ccdc85c
Gipc1
Akirin1
Ptov1
Wasl
Fam227a
Cby1
Sash1
Dbp
Car11
Tom1
Ptcd3
Polr1a
Ap2m1
Cnot6
Vmn2r102
Cdh12
Nphp4
Kcnab2
Mrps11
Mrpl46
Eif3b
Rarg
Oasl1
Paxip1
Iqce
Brat1
Cdiptos
Cdipt
Cmc2
Cenpn
Prox2
Prdm10
Tigd5
Eef1d
Dlst
Cenpe
Mycbpap
Atg12
Ap3s1
Vangl2
Pknox1
Rpn2
Mroh8
Slc39a3
Rusc2
Aldh4a1
Trip10
Gpr108
Calm3
Septin11
Sspn
Dut
Them6
Atp6v0c
Dot1l
Ifna13
Spata17
Gpatch2
Cln8
Madd
Por
Arntl
Sp2
Lyrm1
Dcun1d3
Rab5b
Dpp9
Pfdn4
Fchsd2
Flcn
Diaph1
Prr19
Pafah1b3
Rab28
Cspp1
Cops5
F830045P16Rik
Iqch
Aagab
Galnt10
Akt2
Prkci
Myh14
Uros
Bccip
Slc35e2
Sharpin
Maf1
Gm35339
Eed
Raly
Timeless
Zfp24
Tepsin
Ndufaf8
Zfp383
Zfp27
Hrc
Rbbp6
Rfx1
Pcdh9
Rpl19
Cacnb1
Ak1
Atrnl1
Apobec2
Tcp11
Kcnn4
Tmem267
Ptdss1
Mterf3
Rnasek
0610010K14Rik
Foxp2
Uchl3
Fbxo33
Celsr3
Prrt1
Ppt2
Rbbp9
Zfp526
Dedd2
Dohh
Sri
Hdac2
Inava
Atg101
Arrdc4
Oxr1
Chmp3
Paip2b
Trir
Get3
Smarcal1
Smagp
Fanci
Dgat2
Arid4a
Rps29
Ndufb1
Cpsf2
Mlst8
G3bp1
Gnb2
Ppp1r13l
Cd3eap
Dnm2
Mblac1
Hyal2
Abhd2
Prmt1
Gzmm
Col9a1
Hap1
Cfap77
Ttf1
Frat1
Sp1
Hdac1
Abtb2
Mat2a
Srxn1
Slbp
Cnot1
Tsc22d1
Wwox
Polg
Arl2
Tmem260
Nmral1
Mbnl2
Traf2
Nfe2
Dchs2
Zfp748
Phldb1
Frat2
Ly6g6f
Abhd16a
Csf2ra
Sema3b
Kctd2
Atp5h
Cwc27
Stx16
Fgd4
Wasf1
Cdc40
Uqcrq
Gdf9
Flad1
Tbc1d17
Akt1s1
C1qtnf6
Dab1
Map7d1
Pkia
Atg16l2
2310039H08Rik
Atp8a1
Tpbg
Apela
Uqcrh
Lrrc41
Tada3
Arpc4
Ppm1l
Zfp143
Sigmar1
Papss2
Ska2
Prr11
Ankar
Lmf1
Vmn2r4
Mtmr14
Cenpp
Ndst2
Tardbp
Lrpprc
Kdm6b
Bzw1
Hexim1
Fzd2
Ablim1
Fbh1
Ankrd16
Prkag2
Mrpl21
Ighmbp2
Uba1
Smg8
Utp18
Mbtd1
Rnf130
BC005537
Limch1
Cpa5
Tst
Mpst
Tmem102
Fgf11
Chrnb1
Ets2
Myl12a
Tcp11l2
Osbp
Dffb
Cep104
Syn1
Sox5
Pik3r3
Cnot3
Dapk3
Eef2
Atp5b
Stt3a
Slc35g3
Polr2a
Wasf2
Eif2ak3
Zdhhc5
Selenow
Ogfod1
Nudt21
Elmo2
Rlbp1
Nemf
Plekhf2
Rtkn
Psip1
Lsg1
Dcps
Nfatc2ip
Id2
Ttll7
Mgrn1
Frmd6
Cbr3
Znhit1
Plod3
Aadacl2fm1
Chchd2
Ppp6r3
Sema4d
Cic
Top2a
Ankrd54
Sorbs2
Adpgk
Tle3
Mocs3
Dpm1
Ube2b
Cdkl3
Pip4k2b
Zbtb18
Selenop
Cdt1
Proser1
Nhlrc3
Slc35e3
Rara
Fus
Cct5
Atpsckmt
Ngdn
Rmnd5a
Ltbp4
Cemip2
Zfp574
Grik5
Zfp637
Spire1
Rab34
Proca1
Smim38
Tnrc6b
Ap3m2
Zfp691
Opa3
Noct
Ephb2
Cobll1
Slc4a2
Cdk5
Cul2
Calml3
Rptor
Ncbp2
0610012G03Rik
Cyp2u1
Wipf1
Sphk1
Kxd1
Fkbp8
Rtkn2
Trim50
Rhobtb3
Col9a3
Rab4b
Mia
Wrap53
Trp53
Rcc2
Irf2bp2
Rnaseh2a
Prdx2
Myl12b
Robo1
Tmem198b
Dnajc14
Prickle1
Ncaph
Otogl
Ube2a
Fdft1
Ndufs7
Lrrc75b
Unc13c
Sort1
Arvcf
Clip3
Chrm1
Tom1l2
Drc3
Atf7
Phldb2
Gpsm2
Ppdpf
Smc3
Camta1
Pabpn1
Inka1
Nudt2
Kif24
Stip1
Gng3
Bscl2
Zfyve21
Xrcc3
Ss18
Hnrnpc
Smg9
Lars
Nfatc1
Glrx5
Ss18l1
Psma7
Fos
Nf2
Zmat2
Pnmal2
Cldnd1
Plpp2
Rnf5
Agpat1
Zfp654
Cggbp1
Kif1b
Adgra2
Swsap1
Rab11b
Syt8
Tnrc18
Scx
Zfp219
Tmem253
Alkbh2
Ung
Tex14
Magi1
Cdc25c
C1d
Malt1
Ivd
Tmem242
Crebrf
Pitpnm1
Cdk2ap2
Npas4
Phf13
Klhl17
Irf2bp1
Efna4
Rhbdd3
Ewsr1
Lrch4
Fbxo24
Ss18l2
Bcl9
Mon1b
Dcaf7
Mtss1
Me1
Wrnip1
Oat
Med25
Fuz
Ankfn1
Zfp580
Ccdc106
Slc25a25
Naif1
Arap1
Tns2
1700034J05Rik
Smim17
Evi5l
Nlk
Marcksl1
Akap8l
Rcl1
Dhrs3
Ankhd1
Gfra1
Map3k3
Rab8a
Prpf40a
Arl6ip6
Syvn1
Ppfia3
Lin7b
Bcl6
Fyn
Mapre3
Prkaa1
Ypel4
Ccdc33
Abhd18
Mrpl44
Got1
Tedc1
Crip1
B4galt7
Trub2
Pcx
Pde6d
Cops7b
Wdr70
Dok7
Atp5e
Pmvk
Maneal
Bcl9l
Zfp687
Mis12
Derl2
Nectin3
Tomm40
Junb
S1pr2
Rhoj
Khsrp
Dap3
Kpnb1
Hnrnpl
Rgmb
Ube2c
Sin3a
Enah
Nol6
Mdm2
Cdca8
9930104L06Rik
Copz1
Mrpl1
Znhit3
Sel1l
Fbxw7
Gripap1
Gatad2a
Zfp180
Zfp101
Pdk2
Spag8
Hint2
Rplp0
Hmgcll1
Ndufs4
Igsf9b
Pcid2
Cul4a
Dhx30
Tpcn1
Iqcd
Vdr
Veph1
Ugdh
Psma8
Agpat4
Erg
Creb3l2
Mapk6
Spag7
Anp32e
Tcf12
Pygo2
Nek6
Kctd14
Scamp1
Erp27
9230019H11Rik
Ift140
Cramp1l
4930558K02Rik
Arhgef40
Nynrin
Tle2
Arhgef1
Mtss2
Ccser2
Prkaca
Meis1
Col9a2
Mvk
Mmab
Get4
Kdsr
Atp5g1
Sox6
Nap1l4
Tbcb
Polr2i
Ovol3
Tmem160
Slc46a3
Frmd5
Il25
Cmtm5
Selenoh
Pacs2
Magel2
Katnb1
Per2
Plod2
Fam110a
Kcnk2
Gjb2
Cpt1c
Myh10
Rab40c
Pnn
Taf12
Ncald
Fbxl14
Tspan4
Polr2l
Smtn
Cdca7l
Tmem218
Zswim4
Med23
Mrpl30
Mitd1
Calcoco1
Timm17b
Pqbp1
Opa1
Chadl
Lsr
Fam187b
Tfcp2
Psd
Fbxl15
Ggct
Vps50
Hepacam2
Bcas3
Tgfb3
Ift43
Pgd
Agrn
Wfikkn2
Olfml1
Kmt5c
Ttc41
Hsp90b1
Tmx2
Med19
Kansl2
Pan2
Gfpt1
Erf
Gli3
Rgs3
Lekr1
Stat5b
Lancl2
Arid1a
Dynll1
Cdo1
Mfsd8
Cnn3
Ttc30b
Fgfrl1
Nup93
Scamp2
Cabcoco1
Leprot
Zfp869
Tctn2
Pin1
Baz2a
3110082I17Rik
Gm51425
Drg2
Yipf2
Timm29
Tmem262
Zfp513
Ddx19b
Aars
Vps51
Gins2
Phb
Ufsp2
1700029J07Rik
Tmem198
Chpf
Zswim3
Acot8
Nup133
Pwwp2a
Otub2
Plxna3
Slc2a1
Syne1
Plin1
Tspan33
1700029P11Rik
Gm5165
Ssrp1
P2rx3
Eapp
Ensa
Wnk4
Nr6a1
Kat6b
Fmnl2
Bbx
Dhx35
Art4
Phf12
Dcaf11
Tjp2
Sptlc2
Actg1
D16Ertd472e
Enpp2
Col2a1
Qrich1
Tcerg1
Hbp1
Ap2a1
Cyth2
Eif5
Srp68
Lima1
Elf1
Phka2
Amhr2
Tomm22
D630003M21Rik
Sdsl
Sds
Mlec
Pcdh1
Tomm70a
Cyth1
Srpk2
Tac1
Pradc1
Cct7
Uvssa
Ift81
Fkbp3
Fancm
Plekhb1
Palb2
Dctn5
Rnf26
Tma16
Slc35a3
Slc26a1
Tdrkh
Mrps10
Dnttip2
Ankzf1
Ermn
Sp7
Pp2d1
Bckdk
Ppp1r9b
Gata4
Mro
Ptpn14
Fxyd3
Gid4
Slc14a1
Mettl11b
Chd6
Atxn7l2
Tatdn3
Nsl1
Dgcr8
Acsf3
Yif1a
Tmem151a
Tsku
Saxo1
Elavl2
Pnpla6
Ibtk
Gm51573
Nfe2l1
Cep192
Neurl2
Ctsa
Zfp646
Zfp668
Denr
Jag2
Gnai2
Kmt2a
Itgb4
Rtn3
Lrrc56
Hras
Igsf8
Ajuba
Slc14a2
Sec14l1
Cdk12
Wdr77
Atp5pb
1700016H13Rik
Rps27l
Fam20b
Phlda3
Myadm
Rbm25
Mtf2
Tecpr1
Pa2g4
Cenpu
Lfng
Smim4
Nt5dc2
Evpl
Nt5c3
Ttll10
Ilf2
Rpl27
Zmynd8
Spsb3
Nubp2
Plekha1
Tmem41b
Dhx32
Arhgef4
Fstl3
Zscan25
Niban2
Oacyl
Zfp821
Cytl1
Gjc3
Sh2d5
Aig1
Inip
Fam149b
Ecd
Tmem250-ps
Rin2
Lemd1
Plekhh2
Sfi1
Cltc
Sh3kbp1
Rbm39
Sgms1
Ttc14
Styxl1
Mdh2
Susd6
Rab21
Spc25
G6pc2
Klk11
Klk10
Clasp2
Rel
Zcchc14
Isy1
Clic4
Spty2d1
Fam89a
Vwa1
Kremen1
Anln
9530077C05Rik
Slc30a5
Eif4a3
Cwc22
Gstp2
Arhgap19
Fam110b
Nacc2
Cst6
Trim41
Jun
Klhl21
Fbxo9
Cilk1
Wdr27
1600012H06Rik
Limk2
Aph1b
Fam227b
Dtwd1
Mllt11
Cdc42se1
Srgap2
Fam72a
Hexa
Ireb2
Letm1
Mrps31
Fam83b
Crybg1
Tmem94
Glce
Wnt10b
Fam204a
Haspin
Med30
Banp
Psmd5
Cutal
Bricd5
Slc29a1
Mymx
Fam3c
Rasip1
Gm5591
Dst
Zfp385b
Adnp
Hexim2
Parpbp
Nup37
Armc1
Zfp532
Xpc
Lsm3
Zxdc
Cct8
Chic2
Zbtb40
Spns2
Edrf1
Psmb3
Pcgf2
Mapk14
Mtus1
Gm33887
Arhgef19
Ube2d3
Hspa4
Aff1
Ddx56
Hnrnpa2b1
Cbx3
Fer
Ttyh2
Rpl38
Knl1
Slc26a8
Mtch2
Ints10
Fam53b
Folr2
Pou2af1
Samd4b
Gmfg
Arf2
Usp20
BC005624
Pmaip1
Wdr36
Serpinb5
Zfp648
Slc25a42
Bbs2
Sh3glb2
Miga2
Tpt1
Nedd4
Ergic1
Eea1
Cgref1
Abhd1
Slc36a4
Sh3bp1
Glo1
Mfsd13b
Cdr2
Fry
Kif13b
Frmd4b
Adssl1
2900026A02Rik
Dhrs13
Lamp1
Sncg
Mmrn2
Akap11
Klk9