ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX236483 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◢ Cdk9: Average

◢ SRX104410: ES cells

◣ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◢ SRX255482: MEF

◢ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◢ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◢ SRX735310: Th2 Cells

◢ SRX735282: Unclassified

◢ SRX735292: Unclassified

◢ Cdk9: STRING

Kpna1
Il31ra
Cldn34d
Olfr806
Vmn2r102
Dchs2
Sspn
Gtf3c6
Eapp
Aadacl2fm1
Drg2
Ube2j2
H2bc4
H2ac6
Taf12
Smim17
Dcp1a
Wwox
Sfi1
Csf2ra
H3c6
Ap1g1
BC107364
Mrpl39
Tex14
Ifna13
Tti2
H4c14
Sirt4
Abhd6
Txnip
H2bc6
H4c4
H4c6
H1f3
Rbm17
H2bc12
H2ac12
Uba2
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Dnttip2
H4c8
H3c8
H2ac10
Cacng2
Agk
Alyref2
Rdm1
Atp6v1h
H3c13
H2bc18
Tmem107
Mrpl44
Zfp143
H2ax
Tmem270
Fyco1
Smg8
Slc29a1
Mymx
Hdhd3
Sema4b
Ccdc83
H1f2
Ndufs7
H3c15
H3c14
H2ac19
H2ac18
Trp53rkb
Scnn1g
Mybl2
Mrpl1
Raf1
Ep400
Dmap1
Ndufc2
Rbpj
Irgc1
Fbxo9
Cilk1
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Ints12
Gstcd
Npas4
Rps19bp1
Pafah2
Utp3
Cryzl2
Ndufaf5
Esf1
Eif4e2
H4c9
H2bc11
H2ac11
Klhl20
Hsd17b11
Ints10
Tph2
Sf3a3
Mybpc3
Jph2
Nme1
Ap3s2
Pipox
Megf8
Gm5820
Psmd2
Spp1
Nuf2
Lrrc59
Sntb2
Med23
Rnf125
H4c3
H1f6
Ndufs3
Kbtbd4
Ppil3
Nif3l1
Spats1
Cpsf1
Dcaf5
Irak2
Fam149b
Ecd
Ntn5
Mtf2
Palb2
Dctn5
Tnrc6b
Ints1
Ccdc107
Cltc
Scrib
Gins3
Opa1
Trmt44
Nsa2
Gfm2
H4c11
Tpm1
Ppp1r10
Mrps18b
Zfp609
Rab33b
Rbm34
Tnks1bp1
Bcl2l1
Vps28
Gdf3
Ppid
Ncam1
Dhx16
1190007I07Rik
Dhx8
Poldip3
Gm3776
Cep85
Slc33a1
Tmem262
Vps51
Rint1
Pus7
Mlf2
Sec24d
Jam2
Mrpl21
Ighmbp2
Adnp
Dhx30
Mrps21
Etl4
Rimbp3
Sox2
Chgb
Ndufaf1
H3f3c
Zyg11a
Scarf1
Rilp
Rubcn
Fyttd1
Hrh2
Sde2
Kdm6b
Capns1
Aaas
H2bc3
H3c3
Tmem101
Snrpe
Gna15
H2ac4
Ptpn6
Grcc10
Ppp1r11
Lyzl6
H3c10
Cdkn2aipnl
H2bc14
Snrpc
Chrnb2
Zbtb37
Hmgxb4
Sost
Cacnb3
Atp5k
Mettl25
Ccdc59
Edc4
Atad2b
H4c12
H2bc15
H2ac15
Stx18
Cdk5rap1
Ttc25
Pou5f1
Kcnk9
Polr2j
Zfp638
Tafa5
Gbx1
Rptor
Mterf1b
Psmg3
Slc39a3
Gpatch8
Pigc
4930558K02Rik
Nos3
Mrps18c
Helq
Svop
Trp53rka
Trmu
Gjc1
Det1
Eps15l1
Msh4
Mtg1
Ttc14
Ddx55
Top1mt
Zfp13
Tubg1
Retreg3
Atg16l1
Ddx56
Nol10
Wdr36
Mrps15
Tekt2
Adprhl2
Cdiptos
Cdipt
Lypla1
Tex19.1
Tkfc
Ddb1
Cdc16
Fam169a
Cbx7
Cipc
Lrp6
Plxdc1
Arf4
Atp6v0d1
Arid5b
Agrp
Golga7b
Ren2
Ren1
H3c7
H2bc9
Zcwpw2
Azi2
Mrps28
Ifi30
Surf6
Ppp1ccb
Ppp1cc
Chd8
Aqp8
Gramd4
Yipf2
Timm29
Ints5
1810009A15Rik
Snx18
Sec22b
Ybey
Mcm3ap
Zmym1
Pigm
Crym
Abca14
Znfx1
Ttc4
Cast
Twistnb
Disp3
Rac3
Cntn2
Ndufb8
Ndufa9
Akap3
Srp68
Fbxl22
Tsfm
Triml2
Tbcd
Usp30
Morf4l1
Rpl27
Gstt2
Npy1r
Hgfac
H2bc13
H2ac13
Rad54l2
Tchp
Ciao3
Zbtb45
Zfp532
Necap1
H4c17
Dffb
Cep104
Sphk2
Rpl18
Fam83e
Rrm1
Spry1
Hsd11b2
Anapc5
Nup54
Dus1l
Rabggta
Josd2
Aspdh
Cenpp
Xrcc5
Fes
Fitm2
Chordc1
Taco1
Sod2
Comtd1
A430057M04Rik
Pou2f2
Nceh1
Ephb1
B4galt7
Nutf2
Paxip1
Kbtbd6
Lima1
Faf1
Arhgef12
Gstm6
Cobl
Ccdc88a
Rpl5
Ints4
Arcn1
Ift46
Zfp113
Rbm28
Ropn1l
Wdr18
Tas1r3
Gne
Trir
Get3
Tars2
Tmem221
Naa35
Ubc
Psmd3
Pex3
Adat2
Slc36a1
Tob2
Dus2
Ddx28
Htt
Dusp12
Angptl6
Fam177a2
Fam177a
Mc5r
Epn1
Rapgef1
Slc15a1
Abca3
Abca17
Gpx1
Phactr4
Def6
Ankrd35
Setd5
Mrps33
Mnat1
Gpr19
Zfp710
Zfp979
Nanog
Epp13
Bfsp1
Med27
Gabpb2
Sdad1
Mrpl35
Med4
Zc3hc1
Man2b2
Sec13
Crocc
Mtmr6
Lsg1
Lhfpl5
H4f16
H2aj
Tmed9
Slc9a1
Acp6
Hint3
A930018P22Rik
Tmem95
L1td1
Kctd11
Errfi1
Zfp598
Dnajc11
Rab1a
Ccdc174
Ing1
Fam220a
Gm5544
Zfp57
Pvr
Banp
Psd
Fbxl15
Snrpd1
Acp2
Bms1
Ssbp1
Tomm7
Tnfsf13
Uqcrc1
Spata24
Gm3448
Gm3417
9030025P20Rik
Dpy19l4
Kctd5
Jtb
Pspn
Alkbh7
Galk2
Cops2
Trip4
Pde6d
Cops7b
Vps18
Pomt1
Ung
Alkbh2
Tdgf1
Gstm1
Gp1bb
Sar1b
Eif3g
Afmid
Tk1
Liph
Pigu
Timm50
Hemk1
6430571L13Rik
Mterf4
Dtd1
Htra2
Dqx1
Aup1
Get1
Snw1
Vpreb1
Top3b
Esyt2
Cnot10
Gatad2b
Ift22
Sgca
Spic
Nt5dc2
Ctdsp1
Parl
Nfatc4
Naglu
Kdm5b
Dppa5a
Rhot1
Stx16
Riok1
Cage1
Ndufv1
Eif5a
Sec23a
Gemin2
1700008O03Rik
Mrpl28
Enpp3
Ccdc110
Rpl3
Dync1i2
Krr1
Tmem242
Mrpl58
Fntb
Eif2b3
Wdr74
1700092M07Rik
Piezo1
Dstyk
Tmem191c
Sulf2
Fam166b
H4c2
H4c1
H3c1
H1f1
Celf2
Pkm
2700062C07Rik
Txn2
Pxk
Smug1
Casq1
Tmem208
Lrrc29
Zfp981
Olfr1499
Fndc3b
Mtmr10
Eps15
Exosc6
Cox7a2
Bloc1s4
Git1
Ankrd13b
Wdr24
Gcnt2
B4galt3
Alpl
Ppp6c
Fra10ac1
Kbtbd7
Arl8b
Poglut3
Dennd6b
Cwc25
Smim8
Rtca
Hoxb13
Dbt
Sgk1
Klhdc4
Zranb1
Vdac1
Ssr2
Thumpd3
Rnf216
Mllt6
Cdk20
Apol9b
Lefty2
Atad3a
Ints3
Cr1l
Pdss1
Kdm1a
Naxe
Plekhm3
Gjb3
Cacng3
Mterf1a
Psmd7
Chd9
Clk4
BC049762
Ccar1
Armc7
Flnb
Camk2b
Mphosph10
Mcee
Zc3h10
Rpl41
Aacs
Napg
H2bc1
H2ac1
Zscan25
Srrt
Zscan22
Zbtb40
Myo10
Mta2
Nfkbie
Tmem151b
Pfdn5
Atp5g3
Ddx20
Sptbn1
Acp5
Jund
Iqcn
Trmt1
Nacc1
Sppl2a
Rpl38
Ppip5k2
Gin1
Psmf1
Caprin2
Wdr90
Ubiad1
Mtor
Cebpe
Dhx33
Arl14ep
Pdss2
Cct8
Mrps2
1700007K13Rik
Tsc22d1
Wbp1
Ino80b
Gemin6
Utp6
Upk3bl
Epb41l4a
Ccr7
Kmt2d
Polr1b
Aftph
Ptpru
R3hcc1
Pycard
Dctpp1
Dact3
Bloc1s5
Hus1
Isy1
Wtap
Stil
Med11
Plvap
Rbm14
Gm21992
Zscan12
Usp37
Cnot9
S100a14
Epas1
Cnmd
H3c11
H2bc22
H2ac22
Atp5g2
Scfd1
2210016L21Rik
Sf3b2
Gal3st3
Msra
Vps33a
Mif
Rnf187
Zfp660
Psmd6
Zcchc4
Ttll3
Plekhb1
Elf3
Cyp2w1
1700020L24Rik
Mrpl30
Mitd1
Slc2a1
Zbtb17
Plpp5
Srarp
H3c2
Nfat5
Uspl1
Mok
Serpina3i
Samd5
Qrfpr
Gm15517
Dhrs7b
Cabp7
Pcbp2
Rfx7
Mkrn2
Ruvbl1
Plekhf2
Aym1
Asah1
Snrpd3
Gucd1
Dcaf10
Aasdh
Fmnl3
Anapc10
Abce1
Pex12
Ap2b1
Pml
Zfp207
Them6
Grtp1
Dmtn
Tle3
Rbl2
Cirbp
Luc7l
Snrnp27
Ikzf5
Acadsb
Nvl
Polq
Ndufc1
Ptpn23
Slc39a6
Elp2
Zcchc3
Aurkc
6820408C15Rik
9530077C05Rik
Plcd3
Acbd4
Mrps31
Otud7b
Psmc2
Dnajc2
Rbsn
Anln
Ilf2
Map2k7
Tnpo3
Sema3b
Pstk
Specc1
Hif3a
Ppp1r8
Ogt
Inhbe
Ifitm1
Acsm3
Ablim2
Ankrd40
Gid8
Dido1
Tefm
Rrp1
Rrp15
Champ1
Csnk1a1
Atp6v0c
Amdhd2
Hif1an
Zfp738
Clcn3
Impdh2
Slc43a1
Zfp141
Tulp1
Slc22a14
Ptprj
Pgghg
Emp2
Bag6
Apom
Phf12
Calm1
H1f5
Ubxn1
Gtf3c3
Btbd8
Tmem115
Orc5
Ptpa
Crat
Nsmce4a
Mib2
Arpc3
Ptcd1
Cpsf4
Atn1
Mcm5
Ralgapb
Pld2
Etfbkmt
Arhgap27
5730455P16Rik
Nufip2
Commd2
Timm44
Parp2
Cpped1
Pld3
2310022A10Rik
Gaa
Zfp827
Zfp980
Tor4a
Tmprss9
Nhp2
Mob3c
Hvcn1
Dst
Srp19
Gspt1
Haspin
Taf5
Tnfrsf12a
Thoc6
Hcfc1r1
Psmg1
Nob1
Cradd
Ctc1
Irf9
Exoc3l4
Cenps
Ndufs4
Ints6
Espl1
Tmed5
Ccdc18
Ipo8
Tma16
Tfdp2
Pnp
Stat3
Tspan32
Wdr31
Tmed4
Stmn3
Neurod4
Myg1
Kcnh1
Gna13
Fstl5
Fgf4
Dusp13
Nemf
Fem1b
Mrpl12
Tpgs1
Rbm4b
Nufip1
Gpalpp1
Zfp280b
Zmynd19
Phc1
Dstn
Dgka
Tab1
Calm2
Kat6a
Nudt15
Rfesd
Vamp1
Pxn
Mrpl34
Dda1
Abhd8
Mob1b
Flywch1
Stk11
Sidt2
Krtap5-5
Cox8b
Adora3
Rnf123
Mst1
Rps3a1
Nip7
Cog8
Wdr61
Lrwd1
Alkbh4
Dynlt1b
Arel1
Pnisr
Arrdc3
Hspa4
Tnpo1
Appl2
Ddost
Zfp821
Ist1
Rps2
Rnf151
Ndufb10
Fbxo46
Bhmg1
Vps13d
Fcf1
E2f3
Sumf1
Ldlr
Fkbpl
Atf6b
Micu2
Ypel5
Mcoln1
Inhbb
Dlx3
Cluh
Zfp668
Zfp646
Timm22
Gtf2h2
Faap20
Saal1
Saa3
Fscn1
Adipor2
Stra8
Ppm1f
Pdlim2
Pde4c
Gm3336
Cox17
Commd4
Chek1
Cds2
Pold3
Mff
Rabl6
Ppih
Golga1
Ints7
Dtl
Ssrp1
P2rx3
Klf2
Aar2
Rae1
Klhdc8b
Ccdc71
Thoc5
Ccny
Atp6v0a1
Hook2
Sos1
Scn5a
Ddx24
Cntnap2
Adra2b
Yars
S100pbp
Med17
Thoc1
Ranbp2
Oscar
Ndufa3
Slc35b2
Zfp770
Camk1d
Elovl6
Elovl3
Cd300ld3
H2bc21
H2ac21
H2ac20
Pemt
Hinfp
LOC547349
Lsm11
Mfsd10
Sh2b1
Vps11
Xylb
Tspyl4