ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX520474 | F9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX3301664: Embryonic limb

◢ SRX3301665: Embryonic limb

◢ SRX018669: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◣ SRX520474: F9

◢ SRX520479: F9

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Trim29
H4c8
Tas2r134
Adam5
Ilf2
Trib3
Gtf2a1l
Sumf1
Mettl14
Stk3
Fanci
Asb2
Slc38a5
Dcpp1
Musk
Polr3e
Cnga1
Fxyd1
Slc44a3
AU018091
Gcm2
Kcnn2
Cbx4
Sacm1l
Agbl5
Etv3l
Fbxo31
Ankrd66
Prss51
Il1b
Mill1
Oxgr1
Tpcn2
Gria3
Gm51598
Slc2a9
Inmt
Scn8a
Vgll4
Snorc
Alx4
Pcx
Lilr4b
Cxcl5
Rffl
Depdc1a
Eif2s3y
Zp1
Gpr141
Fmc1
Cyp2f2
Foxp2
Defb8
Klri1
Mrgpra2a
Dytn
Ifna6
Rps29
Vmn1r205
Avpr1a
Alox12b
Rnase4
Ang
Gnl2
H2-M5
Shox2
Cngb3
Knl1
Herc6
Rab27b
Papln
Igfbp2
Cxxc4
Oasl1
Slitrk3
Olfm5
Cmas
Iigp1
Katna1
Pde4a
Islr
Ltbp1
Fam3c
Dcpp3
Ppp6r3
Gfpt2
Irak3
Ctnna3
Nkx2-5
Zic4
Ces1f
Tgtp1
Gm45337
Mboat1
Nt5c1b
Krtap6-1
Epha5
Shank1
Chic1
Alox5ap
Gnb5
Ercc1
Acp6
Selenbp1
Ly6l
R3hdm2
Pomgnt2
Akap17b
Scgb2b2
Rftn2
Ott
Gm15107
Gm15085
Rarb
Fubp3
Cyp2d9
Cped1
Pak3
Slx4ip
Olfr222
Scgb2b1
Lrrtm4
Olfr1200
Ndp
Olfr813
Fabp6
Chpf2
Serpinb12
Acsm2
Samd14
Gpr174
Aass
Ccdc85b
Ces2a
Stau2
Mynn
Coro6
Lmo3
4930503B20Rik
Pros1
Proca1
Triml2
Stbd1
Fam71f1
H2aj
Dcc
Oxnad1
Dph3
Tdpoz3
Exosc2
Emp2
Arhgef19
Scgb2b3
Enpep
Frmd4b
Ucn3
H2-Eb2
Smarca1
Dsg4
B3gat1
Dusp5
Cdh26
Hsd3b3
Ttk
Porcn
Fuca2
Sgk3
Rbks
Babam2
Dgat2
Gas1
H2-T9
H2-T22
Gm6034
Retnla
Zswim8
Gpm6a
Tc2n
Echdc2
Crebzf
Tfpi
Fuom
Trim34a
Trarg1
Olfr125
Ceacam11
Inip
Ikzf4
9930111J21Rik2
9930111J21Rik1
Tm7sf3
Zfp385a
Enpp4
Nanos2
Mgrn1
Cyp3a16
Olfr902
Mymx
Rpl37rt
Rbpj
Pabpc5
Prickle2
Cd163l1
Nxf2
Pcdhb9
Spink13
Kcnip1
Usp17la
Prkg1
Tmem229b
Nudt11
Lipi
Kncn
Clic5
Cdh19
Lamp5
Mlxipl
Krt19
Tfrc
Uck1
Strip1
Fam25c
Ndufs7
Hivep3
Gtpbp4
Rara
Cdk15
Lsm6
Brk1
Adgra2
Dpp9
Ostn
Xlr4c
Cntnap5b
Vmn1r188
Pde6b
Marco
Cel
En2
Plekhb1
Olfr1337
Kdm5a
Luzp1
Cxcr3
Mtf2
Muc1
Lgals7
Gap43
Cdx1
Klhl34
Tspan9
Dusp9
Il33
Lipe
Pyroxd1
Rhobtb1
Usp17lb
Olfr971
Alkbh7
Tomm5
Qrfpr
Slc43a1
Bmt2
BC048679
Eif4e1b
Phf5a
Aco2
Cfl2
Tradd
Fbxl8
Dedd
Mylpf
H2-Q9
H2-Q7
Mib2
Ghdc
Olfr1286
Ms4a20
Ccr2
Tcp11
Agtpbp1
Slamf7
Paqr5
Pbld2
Dag1
Slc6a16
Cog6
Agxt2
Dok4
Rpe
Sdha
Ccdc127
Eapp
Tex14
H4c3
Asmt
Slc15a1
H3c6
H3f3b
Sspn
Rdm1
Srsf7
Polr2a
H3c7
H2bc9
H4c4
Mkrn1
Tmem191c
H3c11
H3c15
H3c14
H4c11
Ing1
H4c18
H3c2
Hspa5
H4c9
H3c3
H2ac19
H2ac18
Gm20594
H3c13
H2bc18
H2bc21
H2ac21
H2ac20
H2bc4
H2ac6
H4f16
H2ax
Hnrnpab
Ttpal
H2bc12
H2ac12
H1f4
Arrdc2
Jund
Nabp1
Rsrp1
H3c10
Btg2
Mphosph9
2810006K23Rik
H4c17
Ubb
H1f2
Hspa8
Taf4
H4c1
Calr
Zbtb37
H4c12
Fam53c
Icam1
Tob1
Arid5a
Arf4
Taf13
Gm3448
Gm3417
Gtf2a1
Ints6
H3c4
Zdhhc18
Tcte3
Gm3435
H4c2
Hexim1
Rpl3
Calm2
Ifitm7
Bmerb1
Ppdpf
Atp2a2
Sde2
Nufip2
Junb
9030025P20Rik
Utp14b
Acsl3
Mpp7
Sgk1
Hsp90aa1
H3c1
Srsf5
Insig1
Sntb2
Csrnp2
Haus1
Atp5a1
Ppp1r10
Mrps18b
Slc9a1
Dnajb9
Poldip3
Klf6
H2bc6
Arl15
Ddit4
Nek2
Calm1
H4c14
Rbm14
Gm21992
Gtf2b
Gpx1
Sub1
Ctsl
Ier2
Znfx1
Fus
Hrob
Raf1
Atp1a1
Pnp
Aplp2
Gadd45a
H2ac4
Cited2
Actb
Jpt1
Eif4g2
Rnf19b
Tsc22d1
Rnaset2b
BC005537
Clu
Mat2a
Sfi1
Tubb4b
H2bc22
H2ac22
Ermard
Smarca5
Prdx1
H2bc11
H2ac11
Errfi1
Rnaset2a
Cox17
Srsf2
Mfsd11
Sf3b1
Letmd1
Eif4a1
H1f3
Smc3
Mknk2
H3c8
Pcna
P4ha1
Hagh
Fahd1
Mcl1
Arl4d
Wsb1
Spata33
Hsp90ab1
Chmp1a
Phc1
Srsf3
Dhx8
Zfp36l1
Btg1
Amd2
Amd1
Hnrnpa2b1
Cbx3
Gtf2f1
H2bc13
H2ac13
Mrpl37
Cyb5rl
Amacr
Ndufa6
Arl6ip1
Trp53inp1
Atxn2
Gpcpd1
Rab8a
H2bc1
H2ac1
Slc38a2
Ftl1
Vegfa
Guf1
Ifrd1
Sephs2
H2ac10
H2bc8
H2ac8
Ier5
Spg11
Zfp710
Tuba4a
Lman1
Dmxl1
H4bc24
H2bc23
H2ac24
H2ac23
Marchf3
Ddx5
Cep95
Slbp
Rita1
Gtf3c6
Prdm14
Hjurp
A730008H23Rik
Zfand5
Zfp438
Dhx32
Cpt1a
Tnrc6c
Mbd3
Sqstm1
Rhob
Pabpc1
Ppp1r3c
Dusp1
Fos
Skp1
Acly
Tob2
Klf7
Rcbtb1
Msh6
Vcl
Rnd3
Peli1
Fam32a
Slc25a39
H4c6
H2bc7
H2ac7
Dennd6a
Cep43
Wsb2
Slc25a3
Dhcr24
Rps12
Gapdh
Ep400
Msmo1
Dnaja1
Pigt
Ubc
Eef1a1
Hnrnph1
H2bc15
H2ac15
Mafb
Abr
Ccnyl1
Slc9a3r1
Maml1
Rps3
Epha2
Dppa2
Glul
Rps20
P4hb
Jun
Plk2
Styxl1
Mdh2
Clic4
Ncl
Pdia3
Mbtps1
Catsper2
Snrpe
Mterf1b
Herc2
Dhx9
Gtf2a2
Traf7
Sap18b
Sap18
Cebpa
H2bc14
Ctnnb1
Ppp1r2
Mterf1a
Kmt5b
Sirt3
Psmd13
Cirbp
Sirt1
Ubap1
Pdcl3
Ttc41
Tra2b
Hsp90b1
Impdh2
Trpm3
Abcb7
Ipmk
Mad2l1bp
Idi1
St3gal3
Ankrd28
Itpr1
Fasn
Chd9
Tcta
Rhoa
Ankrd11
Hhex
Frmd6
Uspl1
Mertk
Vamp1
Ppp1r15a
Plekha4
Kctd5
Atp5e
Smg5
Pcmtd1
Usp37
Ndufs8
Cnot9
Urgcp
Tsc22d2
Slc25a51
Ndel1
Slc25a30
Sesn2
Erf
Hmga1b
Hmga1
Napepld
Susd6
Map1lc3b
Gls
Wdr77
Atp5pb
H2bc3
Klf10
Rps6
Paxip1
Creld1
Ptpmt1
Por
Txnip
Pdhx
Apip
Fdx1
Klhl21
Dnajb1
Mrpl1
Acer2
Mrpl39
Caap1
Ncoa3
Erdr1
Clcn4
Gpx4
Dnajb4
Chchd2
Nfkbia
U2surp
Hspa1l
Hspa1a
Mylip
Grcc10
Ciao2b
Rsrc2
Kntc1
Cdkn2aip
Prmt8
Rnf103
Med23
Mpc1
Kdm4c
Socs3
Dgat1
Ccdc110
Fyco1
Acy3
Arhgap19
Man1a
Fth1
H2-Bl
Chordc1
Atp1b2
Sertad2
Rnf125
Tagap1
Serinc3
Rps2
Cd81
Rusc2
Rpl7a
Med22
Txn1
Rpl23
Zfp119b
Slc31a1
Fkbp15
Nudt4
Eif3a
D230025D16Rik
Taf1d
4931406C07Rik
Whamm
Rpl13
Ern1
Adpgk
Zswim3
Acot8
Uqcrc1
Actn4
Irs2
Hspa1b
Rcl1
Gadd45g
Degs1
Rplp0
Cebpd
Sertad1
Cyren
Smyd4
Rpa1
Lrrc28
Mapkapk2
Ddx3x
Rps24
Nrd1
Gclc
Rps27rt
Rab13
Atp5g3
Ncoa4
Glce
Cpm
H3f3a
Ccnt1
Sgf29
Snx18
Mak16
Ppia
Nfe2l2
Eef2
Rpl9
Lias
Pcif1
Ulk2
Pdk1
Homer3
Chchd1
Rps9
Rbbp6
Baiap2
Shld2
Glud1
Tti2
Rbm39
Zfp119a
Vmn2r4
Tnnt1
Actg1
Nr6a1
Mrps28
Arrdc3
Nsrp1
Map2k4
Scnn1g
Eif4e
Dip2b
Pik3r3
Mapk1
Pigl
Ncor1
Ankrd39
Klf2
Rcn2
Npm1
Hmox2
Gadd45b
Ndufaf3
Tuba1c
Rbm4b
Wdr82
Zfp959
Midn
Plec
Slc5a3
Mrps6
Commd1
Adk
Abcb8
Vps52
Rps18
Tmem39a
Naca
Bbs2
Trappc3
Sod1
Rpl17
Ost4
Map2k2
Ddx24
Ccar1
Zfp963
Slc16a10
Rtn3
Rab33b
Csrnp1
Nfe2l1
Slc20a1
Rpl8
Etfrf1
Casc1
Plk3
Mapk14
Jak1
Nfkbiz
Ctdp1
Unc5b
H2-Q8
H2-Q6
Ggcx
Epc1
Eif1
Slc2a1
Nme1
Tango2
Ksr1
Cfap20dc
Ttc7
Rnf38
Smurf2
Ppib
Med21
Taf4b
Cpsf1
Rnd1
Mob1b
Dnajc1
B2m
Paip2
Ssbp1
Id3
Hint1
Bsg
Gpat4
Pfn1
Setd5
Rhou
Spry4
Edrf1
Cat
B4galt3
2410002F23Rik
Lgr4
Irf8
Pcf11
Slx1b
Atp5j
Kcnk5
Sgpl1
Tiparp
Pgrmc1
Net1
Fxr2
Taco1
Herpud1
Top1
Srp19
Bclaf1
Acer3
Lsm14a
Ubr3
Rpl15
Nkiras1
Usp53
Rapgef6
Psme4
Phf11d
Ctbs
Stra8
Snrpg
Sugt1
Ptma
Fbxo8
Cep44
Atp5b
Ywhag
Knop1
Iqck
Fam43a
Acad12
Hs3st3b1
Mtr
Kbtbd7
Esyt2
Ints14
Ell2
Ndufa2
Ik
Wdr25
Wars
H2aw
Zfp770
Rpl41
Plpp1
Pikfyve
Idh1
Tgoln2
Tgoln1
Nop58
Flnb
Mllt6
Atg4d
Odc1
Nt5dc3
Rpl10a
Alg1
Rab5b
Ints8
Crot
Ptpa
Crat
Rnf149
Manf
H2az1
Rab43
Kansl2
G3bp1
Nfyb
Mtfr1
Gabbr1
Becn1
Sec22b
Mdk
Selenok
Irak2
Dynll1
Tab1
Rasl10b
Fra10ac1
Ddit3
Sfpq
Endog
Bcl2l1
Trmt2a
Ranbp1
Ptp4a1
Ahcy
Lpar5
Crybg2
Ulk1
Arc
Sorbs1
Gpi1
Sp1
Slc35d1
Tpi1
Lrrc8a
Rps28
Ndufa7
Pih1d1
Dennd10
Aldh16a1
Eprs
Cebpb
Zfp930
Snx29
Rbp4
Neu1
Atl2
Tpcn1
Rhot1
Rack1
Mrpl45
Iqcd
Slc18a1
Atp6v1b2
Id2
Cltc
Stat2
H2-K1
Ddx20
Atp6v0a1
Mpv17l2
Gorasp2
Hspb8
Cnbp
Trf
Mrpl44
Usp42
Nr3c2
Ddost
Daam1
Srsf6
Matr3
Akap8l
Tmem175