ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX337439 | Liver
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX3301664: Embryonic limb

◢ SRX3301665: Embryonic limb

◢ SRX018669: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◣ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

H4c3
Junb
Srsf7
Hspa8
H4c4
H3f3b
Polr2a
Rdm1
Ing1
Jund
Arrdc2
H3c15
H3c14
H2ac19
H2ac18
Nabp1
Btg2
P4ha1
Taf13
Mafb
Eapp
Rsrp1
Calm2
Srsf5
Tob1
Clu
Ints6
Rnaset2b
Arid5a
Dgat2
Calr
Rnaset2a
Ddit4
Slc9a3r1
Gpx1
H2bc21
H2ac21
H2ac20
Atp1a1
Hsp90aa1
Calm1
Hspa5
H2ax
Tuba4a
Epha2
Clic4
Utp14b
Acsl3
Hexim1
Mphosph9
2810006K23Rik
Ier2
Man1a
Zfp36l1
Rpl3
Sde2
Hhex
Vcl
Vegfa
Raf1
Taf4
H4c18
Klf6
Dnajb9
Irs2
Nufip2
Znfx1
Cebpd
Hnrnpab
H1f4
Tex14
Cited2
Ttc41
Hsp90b1
Ipmk
Jun
Mertk
Arl4d
Fam53c
Cebpa
Hsp90ab1
Ubb
Ep400
Actb
Trp53inp1
Ctsl
Tubb4b
Sub1
Ppp1r3c
Rnd3
Ndufaf3
Tob2
P4hb
Rnf103
Zbtb37
Rhob
Frmd6
Eef1a1
Socs3
Rnf19b
Zfand5
Aplp2
H4c9
Slc9a1
BC005537
Fus
Unc5b
Mknk2
Amd2
Amd1
Sephs2
Id3
Slc38a2
Klf7
Vamp1
Plk2
Rhou
Lrrc28
Irf8
H4c14
Mad2l1bp
Acly
Susd6
Whamm
Dnaja1
H4f16
Mat2a
Sspn
Ier5
Acy3
H4c17
Kdm4c
Hs3st3b1
Fdx1
Ell2
Herc2
Mapkapk2
Shld2
Glud1
Hnrnpa2b1
Cbx3
Snrpe
Ndel1
Sesn2
Idi1
Klhl21
Rab43
Nudt4
Ifrd1
Irak2
Traf7
Eif4g2
Wsb1
Slc31a1
Fkbp15
Sirt1
Fos
Tsc22d2
Gadd45a
Sf3b1
Hjurp
A730008H23Rik
Sqstm1
Slc25a3
Cebpb
Gtf2b
Marchf3
Tcta
Rhoa
Neu1
Insig1
Plk3
H4c2
Prdx1
Tnrc6c
Id2
Maml1
Hspb8
Trf
Ddx24
Nr3c2
H4c8
Klf10
Ncoa3
Ctnnb1
Nfkbia
Ugdh
Mcl1
Ncl
Adk
Csrnp2
Nfkbiz
Tango2
Srsf2
Mfsd11
Btg1
Gapdh
Selenop
Acer3
Ube2h
Pdia4
Pdia3
Catsper2
D230025D16Rik
Arl15
Cd81
Peli1
Plec
Ftl1
Fasn
Jpt1
Fzd5
Jak1
Gpat4
Srsf3
Cyp2d10
Rnd1
Lgr4
Dhx8
Msmo1
Mtarc2
Myo6
Igfbp4
Pcf11
LOC114841036
Fkbp2
Luzp1
Baiap2
B2m
Tpcn1
Iqcd
Arl6ip1
Slbp
Med23
Ppp1r10
Mrps18b
Ccnyl1
Gpcpd1
Ern1
Raph1
Slc25a30
Cat
Gtf2f1
Gclc
Atf3
Ppp1r15a
Plekha4
Kctd12
Eif4a1
Dusp1
H3c7
H2bc9
Tat
Acer2
Herpud1
Haus1
Atp5a1
H2-K1
Lcat
Glul
Tra2b
Smc3
Sympk
Gfod1
Foxo3
Foxa3
Fam214a
Sap18b
Sap18
Csrnp1
Cyb5a
Snrk
Mterf1a
Flnb
Cdo1
H1f2
Rbm14
Gm21992
Zfp36l2
Slc16a10
Ddx5
Cep95
Sc5d
Dnajb1
Slc5a3
Mrps6
Sorbs1
Stat2
Tsc22d1
Chchd2
H3f3a
Mapk14
Cirbp
Degs1
Ttc7
F2r
Ddit3
Kctd5
Snai1
Ppp1r2
Snx18
Angptl4
Ass1
Adpgk
Adap2
Creld1
Selenbp2
Pdlim5
Trappc3
Net1
Dbi
3110009E18Rik
Jarid2
Foxq1
Dmxl1
Mterf1b
Isoc2a
Skp1
Dnajb4
Actn4
Dnajc3
Ddost
Stard5
Zfp36
Grina
Hmga1b
Hmga1
Dusp6
Scarb1
Ankrd11
Pcna
Pabpc1
Nrd1
Slc30a9
H3c13
H2bc18
Scp2
Actg1
Ulk1
Rbm4b
Atp5g3
Plpp1
Cotl1
Ddx3x
Ahcy
Hnrnph1
Ankrd39
Preb
Fth1
Lipg
Kcnk5
Endog
Cry2
Mrpl1
Mtfr1
Kmt5b
Hsph1
Ost4
Jup
Map2k1
Ankrd37
Dync1h1
Tle1
Spg11
Osgin1
Impdh2
Gadd45g
Ptprk
Arhgap29
Hspa1b
Tpi1
Tdo2
Man2b1
Ripk2
Ostc
Cpeb2
Pdk2
Abhd15
Atp2a2
Itpr1
Txn1
Rbbp6
Dip2b
Atl2
Dynll2
Rtn3
Fech
Pygl
Larp1b
Nedd9
Zfp963
Cap1
Map2k4
Ggcx
Dnajc1
Cldn3
Ptms
Rsrc2
Kntc1
Glce
H3c6
Glrx5
Paxip1
Pdcd4
Pitpnc1
Xylb
Bsg
Hdlbp
H4c11
Tnfrsf1b
Pnp
Dhcr24
Mafk
Bahcc1
Abca1
Ccdc117
Ero1b
Foxo1
Rnf38
Sptan1
Irf6
Lrrc8a
Iffo2
Pcif1
Daam1
Alcam
Mapk8
Slc27a2
Hao1
Clec2d
Crot
Fn1
Znrf2
Macrod1
Ulk2
Tiparp
Pik3c2a
Pdhb
Gtf2a1
Plcb1
Tbc1d13
Pikfyve
Idh1
Acap2
Abtb2
Serinc3
Hif1a
Dus1l
Mogs
Litaf
Hspa1l
Hspa1a
Slc66a1
Akr7a5
Acad12
Edem1
Zfp568
Erf
Pik3r1
Map4k5
Atl1
Smad7
Dhx9
Kdelr2
Slc20a1
Atg4d
Nt5dc3
Tuba1c
Pih1d1
Aldh16a1
Hmgcs2
Abca14
4833420G17Rik
Creld2
Alg12
Cpm
Tpt1
Lifr
Sgk1
Zswim3
Acot8
Tarbp2
Farp2
Tmem205
Map3k12
Ccdc159
Apob
Ctbs
Akap8l
Rps15
Ubr2
Etv5
Stx16
Ptpn1
Ces1c
Cep43
Jag1
Gpt2
Ephx2
Eif3a
Hmox2
Nadsyn1
Dhcr7
Esyt2
Azin1
Fam207a
Sh3bp2
Tgm2
Pxmp4
Fads2
Gch1
Pdlim7
Aldoa
Cpt2
Hbegf
Serpine1
Pkd1
Pdhx
Apip
Hacd2
Sec61a2
Fmo5
Dnajb2
Gadd45b
Selenok
Efna1
Atp5b
Pim3
Mrpl44
Baiap2l1
Chordc1
Stat3
Lbh
Csrp2
Sertad2
Rab5b
Usp42
Slc26a2
Pcx
Itch
Wdr3
Pgrmc1
Rfk
Ubxn6
Pklr
Hdgfl2
Fam20c
Epc1
Klf2
Mavs
Cstf2t
Srp9
Errfi1
Gnai2
Txnl1
Chka
Ccno
Ppia
Alg1
Mxd4
Urgcp
Nsrp1
Nme1
Hgsnat
Rpl7a
Med22
Ero1a
Retsat
Elmod3
Raly
Gstp1
Bach1
Pkn2
Manf
Tmbim6
Ttyh2
Ncoa4
Sec22b
Nars
Otud3
Eef2
Tle4
Drg2
Slc25a33
C3
Dlc1
Pdia6
Map2k2
Gzf1
Tfrc
Rps6
Ssbp1
Trim25
Onecut2
Scnn1g
Bms1
Mbtps1
Etfrf1
Casc1
Ivd
Styxl1
Mdh2
Pank2
Plpp3
Sh3glb1
Acsl1
Tnrc6b
Abcb10
Aldh2
Srp19
Hnrnpa0
Kyat1
Srsf4
Fam53a
Cyp27a1
Pex11g
Fh1
Tti2
Top1
Zyx
Pi4k2a
H2-Q10
Fkbp4
Napepld
Ptma
Amacr
Mtr
Selenos
Mtnr1a
Zranb1
Ctdp1
Slc25a22
Sertad1
Fgfr3
Ppdpf
Paip2
Hmox1
Dlgap4
Txnip
Rab33b
Tmem199
Poldip2
Rabgef1
Psap
Arrdc3
Mapk1
Rapgef6
Pnrc1
Msrb1
Rcbtb1
Cdc42
Mfsd14a
H2-L
H2-D1
Ints8
Serpina1b
Kif1c
Inca1
Icam1
Xrra1
Spcs2
Ppp2r5d
Them7
Aldob
H2bc4
H2ac6
Tmem60
Phtf2
Rhpn2
Fbrsl1
Mpc2
Dcaf6
Hmgcl
Mylip
Eif1
Tgoln2
Tgoln1
Klhl24
Shb
Phyh
Gpx4
Fra10ac1
Prodh
Coro1b
Ndfip1
Mrpl39
Nfyb
Eprs
Diaph1
Abcd3
Gtf3c6
Slc18a1
Atp6v1b2
Dnm2
H4c12
Spry4
Atp10d
Safb
Safb2
Evi5
Fam222a
Becn1
Zbtb8os
Rbbp4
Smad1
Samd1
Pcyt2
Sod1
Sp1
Dtwd2
Als2
Tpst1
Klf3
Efnb1
Hmgcs1
Hagh
Fahd1
Arih1
Eif4ebp2
Mbd3
Ppib
Atad2b
Serf2
Sned1
Hykk
Selenbp1
Pigl
Ncor1
Slc12a7
Dstn
Gjb2
Slc3a2
Ssh2
Slc38a3
Rpl22l1
Baz1a
Uspl1
Rps2
Hmgcr
1810013L24Rik
Fzd7
Map1lc3b
Tmem126a
Maf
Ccin
Rplp0
Pfn1
Cpsf1
Ets1
Pnpla8
Hook2
A130010J15Rik
Map7d1
Dedd2
Agtr1a
Srsf6
Clp1
Tatdn1
Ndufb9
Vta1
Dglucy
Ube2g1
Epas1
Taf1d
4931406C07Rik
Rps9
Alas1
Plag1
Stau1
Gls
Bcl2l1
Tmx4
Plscr3
Rpl23
Nfe2l2
Atp1b1
Brap
Acad10
E4f1
Prkar1a
Dgat1
Ankle1
Ssna1
Anapc2
Eif3j2
Eif3j1
Amz2
Cth
Xrcc6
Desi1
Sgpl1
Rpl24
Myo10
Amotl2
Ccng2
Fam107b
Rras2
Irf2bp2
Ext1
Prxl2c
Pxn
Bzw2
Ankmy2
Zfp213
Zmym2
Zfp574
Cdc34
G3bp2
Mrpl20
Ddt
Ppp3ca
Comtd1
Tmem14c
Slc11a2
Lpin1
Flcn
Cnbp
Tmem123
Wdpcp
Mdh1
Zfp1
Pnrc2
Zfp446
Orai1
Ksr1
Tpm1
Serpina3m
Chd9
Rad51d
Golga1
Cycs
Ptbp1
Lrrc63
Lcp1
Apoa2
Rcn2
Aacs
Efhd2
Med21
Odc1
Wdr45b
Sdc4
Pms1
Ormdl1
Arid4a
Xbp1
Otud1
Pitpna
Oaz1
Edem3
Epb41
Ptp4a1
Slc30a5
Sec61a1
Tcim
Smg1
Zfp800
Cep85l
Akap13
Acvr1b
Napa
Slc7a5
Tmed9
Pspc1
Garem1
Wdr89
Hdac1
Midn
Rpl8
Rpl36al
Mgat2
Arl4a
Cox5a
Atf4
Cpsf6
Cyp4a10
Cbln3
Cdk13
Gnmt
Smg5
Ccnl1
Tmem169
Tfcp2
Sdhaf3
Ppp1r3b
Pecr
Vps52
Rps18
Rpl11
Cdk2ap2
Cyp3a13
Bmt2
Fnbp1
Cgnl1
Sacm1l
Tomm70a
Tm9sf2
Them4
Ubr3
Oga
Tubb2a
Primpol
Casp3
Stard3
Tagap1
Ociad1
Lap3
Pafah2
Arg1
Abcc10
Mia3
Rnf181
Nuak2
Ddx20
Top3b
Pdia5
Bbx
Txn2
Bsdc1
Gm20594
Rpl10a
Gorasp2
Pts
Oxsm
Ngly1
Ier3ip1
Zfp746
Sbf1
Plin2
Map3k2
Snd1
Ndufa12
Ube2j2
Snrpd3
Gucd1
Rnf14
Rnf11
Por
Txnrd1
Ptpn12
Megf9
Faap20
Tkt
Nmt2
Mmd
Asb13
Zfp119b
Crlf3
Zfp69
Trim65
Qsox1
Usp53
Hyou1
Prdx6
Rev1
Lrig1
Poldip3
Copz1
Ccdc110
Rps27rt
Rab13
Hmbs
Bcas3
Arl8b
Ten1
Pim1
Mlycd
Acox1
Hspa2
Bdh2
Slc25a15
Cdkn2aip
Snx29
Slc36a1
Slc25a5
Sec61g
Luc7l2
Gstm6
Setd5
Asph
Surf4
Stkld1
Birc5
Dnajc16
Npc1
Chid1
Fam43a
Phf14
Ndufa4
Exd1
Chp1
Zfp706
Gnpat
2810004N23Rik
Fem1c
Zfp277
Dock4
Zcchc14
Ywhah
Mak16