ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX118693 | mESC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX3301664: Embryonic limb

◢ SRX3301665: Embryonic limb

◢ SRX018669: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◣ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Greb1
Acacb
Wwox
Abhd6
Olfr806
Setd4
Cbr1
Aadacl2fm1
Slc7a15
Marchf3
Tcstv3
Esr1
Tecpr1
Olfr855
Olfr854
Prl3c1
Bmpr1b
Fbxw7
Fam227b
Dtwd1
Tmem211
Zfp949
Nemf
Akirin2
Malt1
Olfm1
Maneal
Slc14a2
Rasip1
Izumo1
Fut1
Fgf21
Tmem33
Prxl2b
Clec2g
Olfr180
P4ha3
Tent5c
Sympk
Npffr2
Znhit1
Plod3
Gcgr
Alg14
Vstm4
Ovol2
Rps29
Lrr1
Tll1
Ilf2
Npbwr1
Zdhhc12
Pkn3
Mycn
Prkdc
Mcm4
Gzmk
Sycp2l
Gcm2
Ctnna3
Ptbp2
Tpm2
Cd44
Nox3
Kpna1
Map10
Adam5
Sacm1l
Asgr1
Jund
Iqcn
Cxcl1
Nkx2-6
H3c10
H2bc13
H2ac13
Olfr1359
Gnb5
Oasl1
Trim7
Trim41
Dcpp1
Edf1
Traf2
Olfr1168
Cdrt4
Fbxo31
Npy5r
Vgll2
Dlg4
Acadvl
Klf4
Tmem131l
Slc28a2
4930563M21Rik
Rasgrf1
Cpa1
Naaa
Kctd2
Atp5h
Paqr4
Pkmyt1
Pom121l2
Nup153
Slc13a2
Prkg1
Ssty2
Gm21242
Atp5g1
Fam71f1
Ptgdr
Mrln
Il31ra
Gm525
Fam24b
Fam24a
Cuzd1
Tmigd1
Rnase4
Ang
Grap
Cldn34d
Cyp27a1
Ss18
Kcnj16
Cbr3
Cox8c
Scn8a
Amy2a5
Amy2a4
Amy2a3
Amy2a2
4921509C19Rik
Akap8l
Cyth4
H3c2
H2ac4
H4c2
H4c1
H3c1
Trim29
H1f1
Snrnp35
Rilpl2
Senp2
Liph
Abcc12
Sh3bp4
Abt1
Rab34
Proca1
Slc33a1
Gmps
Habp2
Wdr35
Tgfb2
Zfp300
Ifna6
Ifna5
Ifna7
Ifna11
Mrpl58
Crebzf
Fam181b
Trib3
Nt5c2
Gja4
H3c8
H4c8
H2ac10
Gucy1a2
Sspn
Mrps2
1700007K13Rik
Fam83a
Pde12
Usp25
Mettl14
Iqcf6
Sgcz
Slc5a6
Cad
Atraid
Pla2g4d
Runx2
Tacr2
Gm3415
Gm3402
4930449I24Rik
Gm17660
Sumf1
Trim17
H3f4
Carnmt1
Camk2g
Tmem125
Erdr1
Fhl1
Xpnpep1
Tmem42
Tgm4
Tro
Nipal1
Cnga1
Htr7
Kcnn2
Fga
Fgg
Klra8
Klra21
Birc5
Kcnk9
Wdr3
Dynlt3
Slc1a2
Ak5
Hps5
Gtf2h1
Timm22
Nxn
Gpihbp1
Rph3al
Best2
Sbk2
Slfn4
Hexb
Camk2n1
Dmrtc1c2
Dmrtc1c1
Ccin
Zswim8
Chchd1
Ppp3r1
Btrc
Krt15
Krt13
Med16
Cfd
Cyp26a1
Amotl1
Vmn2r102
Ei24
Rgs18
Gm648
Adck5
Klra10
Limch1
Fmc1
Harbi1
Atg13
Zfp692
Sp8
Hoxb1
Tnfrsf13c
Shisa8
Fbxo8
Cep44
Sncaip
Fndc7
Rad51ap1
D6Wsu163e
Aurkb
Rara
Ccdc58
Setbp1
Calm4
Ppp1r37
Krt75
Ttf1
Cfap77
Tube1
Fam229b
Magel2
Gabrb3
Adamts19
Mkrn2os
Setd1a
Orai3
Cfap126
Ppl
Hes7
Aloxe3
Wif1
Trim58
Trpm1
Dpysl3
Dcaf5
C87436
Brpf1
Etv3l
Rsph3b
Rrn3
Obi1
Gm14151
Jag1
Ptgr1
Btbd3
H2-Eb1
Kcnb2
Onecut3
Tbcel
Hemgn
Gas1
Olfm5
Fcrl6
Phc2
Ptges
Ccnt2
Dbr1
Armc8
Rnase12
Olfr750
Safb
Safb2
Rbks
Babam2
H4f16
H2aj
Npas4
Hnrnpul1
Mrgprx2
Dcdc2a
H2bc6
H4c4
H3c4
Ms4a4b
Plekhb1
Exosc2
Hoxa1
Rasl10b
E030030I06Rik
Asmt
Rplp2
Slc25a22
Pidd1
Tdrd7
Gpatch8
Dlgap3
Rad23a
Calr
Farsa
Ube2b
Cdkl3
Atxn2
Txndc11
Brox
Aida
Csf2ra
Fbxw4
Tex14
Mcl1
Slc15a1
Pcdh20
Pibf1
Dis3
Tet2
Eapp
Arl4d
Cdv3
Ube2s
Adgra2
Oxnad1
Dph3
H4c3
H1f6
Tmem231
Gabarapl2
H1f3
Kcnk5
Efnb3
Olfr1274
Rarb
H4c6
H3c7
H2bc9
Hivep3
Sbno2
Pald1
H3c3
H2bc3
Aqp3
Stk11
Ints3
Socs3
Ccdc171
BC107364
Gpx4
H2bc7
H2ac7
Tmem181a
H1f2
Hmox2
Slc43a1
Atp11b
Fubp3
Zfhx2
Thtpa
Uri1
Znfx1
Bbs1
Xbp1
Hoxb13
Tomm5
H3c6
H2bc8
H2ac8
Mtf2
Pdgfrb
Cdx1
H4c11
Ifna13
H2bc12
H2ac12
Unk
H3f3b
Tm7sf3
Med21
LOC666331
Gm11634
Aldh9a1
H4c9
H2bc11
H2ac11
Rdm1
Prdx6
Bcl2a1a
Taf13
Ttc39d
Srsf7
Cerk
Zbtb4
Slc35g3
Polr2a
Abca3
Bcl2a1b
Cmip
Rpgrip1
Mkrn1
Cdk15
Fitm2
Tctn1
Notch4
Abca17
Agpat5
Gm10710
Dchs2
Adcy5
1700037H04Rik
Ier5
Srp14
Ubb
Tmem191c
H3c11
H2bc22
H2bc14
H2ac22
H1f5
Abl1
Dennd2c
Pspn
Clpp
Alkbh7
Brwd1
Gramd1b
Oaz2
Tmem18
Plbd2
Tfrc
Bcl2a1d
Tm2d2
Adam9
Taf4
Fbxo44
Fbxo2
Nudt4
Kat7
Hspa8
Mylip
Abr
H3c15
H3c14
H2ac19
H2ac18
Dpagt1
Klf2
Capns1
Trpm3
Lag3
H4bc24
H2bc23
H2ac24
H2ac23
Cd209a
Ksr1
Ier2
Sub1
Ect2
Rhobtb1
A930033H14Rik
H4c14
H3c13
H2bc18
Mtnr1a
H4c18
Poldip3
Rnf19b
Ing1
Cars2
Enpp4
Creb3l3
Cidea
Ucp2
Nek2
Hoxb4
Snai1
Fndc3b
Taf12
Gmeb1
Foxp1
Hspa5
Xylb
Tcp11
Rnf13
Mreg
Dnah7b
Rcc1
Gm36210
Cic
Tal2
Col6a6
Nabp1
Tnfsfm13
Tnfsf12
Baz1b
Ncor1
Srsf3
Fbxo6
Bcat2
Xpo1
Gm20594
Extl1
Galnt2
Mafa
Bmerb1
Ints6
H2bc21
H2ac21
H2ac20
H2bc4
H2ac6
Sertad2
Taar6
Lasp1
Hmbs
H2ax
Pigz
Pmepa1
Golga7
Mdga1
Lmbrd1
Gtpbp4
Adgre5
Gadd45b
Evi5
Ap3s2
Sgf29
Itga5
Hnrnpab
H4c17
Bmt2
Rarg
Ttpal
Foxo3
Ncmap
Gtf2a1
Nfyb
Unc93a2
Hjurp
A730008H23Rik
Plekha7
Gstp2
Gstp1
2510009E07Rik
H1f4
Arrdc2
Creld1
Nodal
Tctex1d4
Plk3
Btbd19
Eif4b
Nectin2
Phf5a
Aco2
Tmem50a
Syf2
Rsrp1
Ifitm7
Wdtc1
Tmem167b
Hsp90aa1
Psmd12
Pitpnc1
Smc3
Dppa2
Btg2
Cited2
Mphosph9
2810006K23Rik
Fanci
Cnn3
Sumo1
C1qbp
Asph
Rusc1
Fcgr4
Rab7
Sfi1
Nop58
Nufip2
Grasp
Kng2
Zbtb37
H4c12
H2bc15
H2ac15
Fam53c
Cdc25c
Rpl11
Ccdc92b
Angptl8
Osbpl1a
Jarid2
Icam1
Smyd2
Hoxb5
Hsd17b14
Tob1
Arid5a
Nudt1
Eif4enif1
Arf4
Cotl1
Hspb8
Dusp9
Gm3448
Gm3417
Rab37
Pomgnt2
Stap2
Mpnd
Nfrkb
Ttk
Il17b
Sec22c
Pcx
Slc6a16
Cd37
Cyp11a1
Pus1
Ep400
Acy3
Prdx2
Junb
Caskin1
Tsc22d1
Taar7a
Porcn
Zdhhc18
Letmd1
Tefm
Kdm3b
Ggact
Ubxn2a
Atad2b
Tcte3
Gm3435
Ubr4
Ranbp3l
Hrob
Hexim1
Mmp11
Gm867
Chchd10
Rab11fip2
Syngr1
Rpl3
Calm2
Mettl7a2
Methig1
Higd1c
Map7
Rps11
Bcar1
Ankrd39
Septin1
Zfp827
Gm20806
Ppdpf
Ubc
Atp2a2
Mtg2
Coa7
Sde2
Rnd3
Stra8
Chd9
Senp3
Unc93a
Tmem170
9030025P20Rik
Mybpc3
Dgke
Sirt4
Hrh2
Slc17a7
Rai1
Lrch4
Fbxo24
Pold2
Wdr92
Utp14b
Pno1
Acsl3
Thap4
Sdha
Ccdc127
Mpp7
Cenpm
Stra6
Smarca5
Car5a
Sbp
Sgk1
1700067K01Rik
Zfp143
Txnip
Slc2a9
Tas2r134
Stk3
Srsf5
Dctn6
Cbx4
Insig1
Sntb2
Rnaset2b
Capn3
Csrnp2
Psma6
Dtx4
Dock6
Ndufb8
Epha2
Btbd16
Mbd6
Ddit3
Fut8
Atg14
Haus1
Atp5a1
Ppp1r10
Mrps18b
Atat1
2410137M14Rik
Ninj2
Coro1b
Idh3b
Slc9a1
Dnajb9
Uck1
Rnaset2a
Pbld2
Hnrnph3
Ccn4
Gtf2a1l
Cacng6
Spg20
4921539E11Rik
Prdm14
Dcaf4
Sema4a
Klf6
Rsc1a1
Zfp36l1
Llgl2
Nsrp1
Acot7
Cfap74
Rnf169
Usp37
Cphx3
Cphx2
Cphx1
Naglu
Dgat2
Arl15
Acp6
Mro
Ddit4
Ndufs7
Dnajc27
Calm1
Myrf
Eif2s3y
Rbm14
Gm21992
Eif4h
Mok
Usp4
Pml
Msh6
Gtf2b
Gpx1
Aqp7
Wsb1
Ube2o
Aanat
Vmn2r72
Msgn1
Ptprf
Hsp90ab1
Fam32a
Cib3
Appl2
Ctsl
Haus4
Gja1
Lrrc10b
D230025D16Rik
Rfc5
Fus
Blmh
H2-DMa
Brd2
Srgn
Septin11
Actn4
Tbc1d10b
Raf1
Mylpf
Ly75
Selenok
Hbegf
Guf1
Atp1a1
Ghdc
Zfp791
Olfr646
Gpr152
Cabp4
S1pr2
Zfp532
Pnp
Poli
Mettl16
Kdm3a
Aplp2
Slc4a9
Phc1
Ptprcap
Gadd45a
Stk35
C1ra
Etnk2
Actb
Slc25a13
Rpl17
BC031181
Kank3
Rnf103
Jpt1
Sec31b
Myo18a
Eif4g2
Ceacam12
Zfp740
Csad
Pick1
Gapdh
Mrm2
Cdk5rap2
Tbl1xr1
Psmd7
Ctdsp2
Cox7a2l
Thrsp
Mis18bp1
BC005537
Elavl3
Arhgap19
Clu
Atp6v0d1
Agrp
Dhx8
Twsg1
Bcl2l11
Trim40
Trim31
Nanog
Trmt1
Nacc1
Men1
Map4k2
Mat2a
Id3
Tubb4b
Stpg3
Slc34a3
Fam166a
Tmed10
Ermard
Sertad1
Pltp
Prdx1
Errfi1
Nme1
Maats1
Cox17
Exosc5
Bckdha
Srsf2
Mfsd11
Mettl23
Misp3
Sf3b1
Itga3
Cyfip2
Dusp1
Dag1
Mpdu1
Eif4a1
Nphs1
Kirrel2
Jam2
Zc3h12a
Mib2
Cdh12
Nup50
Fads1
Prdm10
Mknk2
Taok3
Tmem135
Msi1
Tmem230
Tle5
Pcna
P4ha1
Klf10
Hagh
Fahd1
Cds2
Tmbim1
Shank1
Clec11a
Tmem129
Tacc3
Slbp
Ndufaf3
Impdh2
Dalrd3
Itch
Spata33
Slc35b2
Slc18b1
Rps12
Chmp1a
Dhx9
Ccdc102a
4932438A13Rik
Slc29a1
Mymx
G0s2
Serpinh1
Slc12a7
Lefty1
Zfp979
Snx6
Sepsecs
Dedd
Aven
Adam32
Zswim3
Acot8
Kcnk4
Gpr137
Bad
Ubash3a
Tnfrsf19
Psmb7
Zfp148
Btg1
Tnrc18
Hgsnat
Smdt1
Ndufa6
Asb2
Amd2
Amd1
Mypn