ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX018669 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX3301664: Embryonic limb

◢ SRX3301665: Embryonic limb

◣ SRX018669: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Wwox
Esr1
Aadacl2fm1
Tecpr1
Olfr806
Slc14a2
Setd4
Cbr1
Greb1
Abhd6
Gzmk
Tent5c
Sympk
Gcgr
Pcdh20
Tcstv3
Acacb
Hexb
Vmn2r102
Sbno2
Stk11
Kpna1
Csf2ra
Olfr1274
Scn8a
Nkx2-6
Stap2
Mpnd
Cox8c
Sbp
Tacr2
Cbr3
Zfp791
Tmem211
Il31ra
Mylip
Brox
Aida
Lrch4
Fbxo24
Hrh2
Fbxw4
Gm17660
Tnfrsf18
Osbpl1a
E030030I06Rik
Klrb1b
Olfr1158
Txndc11
Cerk
Olfr855
Olfr854
Znhit1
Plod3
Gm10710
Dchs2
Rasip1
Izumo1
Fut1
Fgf21
Zfp949
Olfm1
Oasl1
Prr32
Crebzf
Rps29
Lrr1
Prickle1
Rrad
Cdh16
Cd209a
Atp5g1
Fam227b
Dtwd1
Ifna13
Col6a6
Iqsec1
Med13
Olfr1219
Awat2
Zscan4b
Tmem42
Tgm4
Mmp25
Aldh9a1
Gm20806
Selenok
Pbk
Trim12a
Krtap3-3
Krtap3-2
Krtap3-1
Taar6
Taar7a
Nudcd2
Hmmr
Taar7b
Zfp46
Zfp598
Npw
Zfp143
Nans
1810037I17Rik
Tyw1
Sbds
Slc43a1
Timm10
E030018B13Rik
Eprs
Sspn
Obi1
Olfr117
Gm16445
Malt1
Slc33a1
Gmps
Rbp4
Pde6c
Zfp715
Cldn34d
Pik3c2a
Gulp1
Ldlr
Prxl2b
Polr1b
Zdhhc17
Lurap1l
Lgals7
Pknox1
Tpm1
Lhx5
Dgat1
Shb
Olfr741
Ms4a1
Spin2d
Atg12
Ap3s1
Gm7714
Ccdc73
Olfr781
Mstn
Spag17
Olfr850
Cyp2t4
Fgf3
Olfr1031
Olfr1030
Olfr1029
Commd1
Zrsr1
Tacstd2
Msantd2
Ctxn3
Twist1
Spn
Calr3
1700030K09Rik
Tgif1
Cftr
Fah
Gsdma2
Tmem178b
Ipo11
Dimt1
Pax2
Wdr92
Pno1
F11
Nemf
Tfap4
Rps9
Ccdc184
Asb8
Plekhg4
Phkg2
Tmem265
Prl3c1
Npffr2
Luzp4
Gstk1
Sly
Gm20931
Pxk
Olfr390
Olfr389
Grm7
Prrx1
Tbx19
Sirpb1c
Ptprm
Scgb2b26
Olfr729
Olfr728
Naa11
Vmn2r19
Trhde
Comt
Rmi2
Myh14
Sp9
Nfatc2ip
Gadd45b
2510009E07Rik
Lmnb2
Satb2
Aven
Bbs2
Setbp1
Kbtbd3
Aasdhppt
Lin9
Creb1
Scrt1
Tmem249
Slc52a2
Fbxl6
Specc1l
Rpgrip1
Rab7
Cd320
Fbxw18
Naa50
Atp6v1a
Nol11
Rprd2
Hic2
Fezf1
Mrpl15
Tmem30b
Pappa2
Col17a1
Pik3c2g
Zfp850
2610008E11Rik
Olfr594
Gm14595
Gm14590
Myocd
Galnt6
Trim34b
Olfr620
Olfr619
Olfr284
Hdgfl1
Vmn1r203
Gm4836
Gm14819
Gm14632
Gm10487
Gm10486
Gm10230
Gm10147
Gm10096
Gm10058
Pth
Umad1
Smarca5
Npepps
Ankar
Elk4
Etl4
Cbx7
Fxr2
Rad18
Wbp2
Itgb2
Saraf
Leprotl1
Nqo2
Ly6c2
Zfp1
Nagk
Dnah7b
Hbp1
Fgf22
Ccdc130
Nupr1
Asb6
BC034090
Abcb9
Zfp658
Lexm
Hunk
Rnf223
Pnpla8
Pou4f3
Gm4925
Arl1
Prkdc
Mcm4
Ifna6
Ifna5
Abcd3
Gm21316
Gm20924
Gm20823
Gm20738
Zscan4c
Gtf2a2
Taco1
1700028K03Rik
Coq10b
Rhbdd1
Skint6
Mtln
Extl3
Olfr1008
C2
Zfp53
Pold4
Fgd1
Zbtb12
Ehmt2
Polr1d
Lnx2
Gabarapl1
Incenp
Sh3kbp1
Thbs3
Mtx1
Ifna4
Ropn1
Olfr1102
Olfr1101
Gm21258
Gm20736
Fzd3
Elavl2
Csn1s2a
S100a5
Lrch1
Olfr1342
Polr3f
Dzank1
Vmn2r12
S100a4
S100a3
S100a2
Olfr46
Epsti1
Car5a
Banp
Pcbp1
Card11
Slx1b
Bola2
Anapc15
Slc28a1
Gm20594
Spry2
Pdcd7
Tmem132d
Six6
Heatr5a
Gcsh
Nqo1
Exd2
Ghrl
1700030J22Rik
Dcaf5
Plekhg1
Ovol2
Rbm34
Ergic1
AW549877
Vps8
Ubb
Opa1
Mtfr1l
Ctsz
Zfp607a
Tubb1
Rbks
Babam2
Mup9
Nprl3
Slc38a7
Lrrc4
Tmem125
Rsph3a
Med15
Zfp110
Acbd5
Zfp810
Zfp148
Zdhhc12
Pkn3
Cdh12
Rpl15
Nkiras1
Arg1
Shoc2
Bbip1
Slx4ip
Net1
Ndufa12
Psrc1
Ypel2
Ice1
Ct55
Bcas3
Snrpn
N4bp2l2
Hexim2
3300002I08Rik
Mettl4
Gpr35
Olfr420
Was
Tmem108
Lfng
Vmn1r167
Nrg1
Flrt2
Gpatch1
Mup20
Rhox8
Olfr482
Nup85
Zfp641
Vmn1r13
Snurf
Olfr285
Olfr257
Bves
Adgrg4
A630073D07Rik
Map4k3
Cdyl2
Mroh7
Fam151a
Ssty1
Map3k20
Gm21454
Cst10
Chrnb4
Syt12
Upk3bl
Spaar
Rab29
Olfr1385
Klk5
Hrct1
Gm5935
Col1a2
4930519F16Rik
Plekhb1
Igll1
Psip1
Zfp324
Lrrc58
Gm36028
Ddx17
Klhl29
Cd1d2
Stx11
Cd1d1
Slc35f3
Elapor1
1700013F07Rik
Disc1
Nfil3
Snx10
Chst3
Ttc27
Bag2
Tet2
Pbrm1
Wiz
Uros
Bccip
Trhr2
Ubp1
Fgfrl1
Tmub2
Tprn
Tmem203
Ndor1
Tmem222
Fis1
Zfp566
Zfp260
Pald1
Rab34
Proca1
Ppfia3
Lrfn1
Sidt2
Sco1
Adprm
G3bp2
Tmbim6
2610524H06Rik
Ccdc124
Ube2q2
Adcy9
Slc25a5
Pygl
Fbxo4
Cdkn2a
Rin2
Defb11
Cdrt4
Spdye4a
Edil3
Olfr99
H2-M3
Mcub
Cst8
Sgpp1
Pramel19
Kcnq2
Fpr3
Cdkn2b
2300002M23Rik
Rnf220
Trappc2l
Galns
Rpl30
Mapk13
Rsph3b
Xpnpep1
Ambra1
Hmox2
Nadsyn1
Dhcr7
Npm2
Abr
Pnrc2
Ppfibp2
Myoz3
Trrap
Tmem130
Lrp4
1110051M20Rik
Asmt
Rbm4b
Lsm14a
Dcaf10
Pisd
Olfr805
Ky
Fyco1
Kdm3b
Rpl38
Kdm6b
Hpx
Olfr1023
Letmd1
Psmb2
Knop1
Iqck
Spata33
Chmp1a
Ncmap
Rusc1
Dop1b
Rplp2
Slc25a22
Pidd1
Baz1b
Jund
Slc39a7
Rxrb
H2-Ke6
Col11a2
Denr
Marchf3
H3c8
Tex14
Mcl1
Slc15a1
Iqcn
H4c8
H2ac10
H2bc6
Slc7a15
Pibf1
Dis3
Gm525
Eapp
Arl4d
Fbxw7
Akirin2
Rad23a
Calr
Cdv3
Ube2s
Adgra2
H3c10
H2bc13
H2ac13
Bmpr1b
Oxnad1
Dph3
H4c3
H1f6
Tmem231
Gabarapl2
H3c2
H2ac4
H1f3
Farsa
Kcnk5
Efnb3
Tmem33
Erdr1
H4c2
H4c1
H3c1
Rarb
Camk2n1
H4c6
H3c7
H2bc9
Hivep3
H3c3
H2bc3
H4c4
H3c4
Aqp3
Ints3
Socs3
Ccdc171
BC107364
Gpx4
Trim29
H2bc7
H2ac7
Tmem181a
H1f2
Atp11b
Fubp3
Zfhx2
Thtpa
Uri1
Znfx1
Bbs1
Xbp1
Hoxb13
Tomm5
Clec2g
H3c6
H2bc8
H2ac8
Mtf2
Ssty2
Gm21242
Pdgfrb
Cdx1
H4c11
H2bc12
H2ac12
Unk
H3f3b
Maneal
Tm7sf3
Med21
LOC666331
Gm11634
H4c9
H2bc11
H2ac11
Rdm1
Prdx6
Ilf2
Bcl2a1a
Taf13
Ttc39d
Srsf7
Zbtb4
Slc35g3
Polr2a
Abca3
Olfr180
Bcl2a1b
Cmip
Mkrn1
Cdk15
Fitm2
H1f1
Tctn1
Notch4
Abca17
Agpat5
Adcy5
Mycn
1700037H04Rik
Ier5
Srp14
Cd44
Tmem191c
Cyp26a1
Cxcl1
H3c11
H2bc22
H2bc14
H2ac22
H1f5
Abl1
Dennd2c
Pspn
Clpp
Alkbh7
Brwd1
Gramd1b
Trim7
Oaz2
Vgll2
Tmem18
Gnb5
Adam5
Plbd2
Tfrc
Bcl2a1d
P4ha3
Tm2d2
Adam9
Taf4
Fbxo44
Fbxo2
Nudt4
Kat7
Hspa8
H3c15
H3c14
H2ac19
H2ac18
Dpagt1
Klf2
Capns1
Trpm3
Lag3
H4bc24
H2bc23
H2ac24
H2ac23
Usp25
Ksr1
Ier2
Sub1
Ect2
Cyth4
Rhobtb1
A930033H14Rik
H4c14
H3c13
H2bc18
Mtnr1a
Kcnj16
H4c18
Poldip3
Rnf19b
Ing1
Cars2
Enpp4
Creb3l3
H4f16
H2aj
Cidea
Fam24b
Fam24a
Cuzd1
Ucp2
Nek2
Hoxb4
Snai1
Ccin
Fndc3b
Taf12
Gmeb1
Foxp1
Tmem131l
Hspa5
Mettl14
Xylb
Ei24
Pom121l2
Tcp11
Rnf13
Mreg
Rcc1
Gm36210
Cic
Trib3
Tal2
Nabp1
Tnfsfm13
Tnfsf12
Slc13a2
Ncor1
Srsf3
Fbxo6
Bcat2
Xpo1
Tll1
Extl1
Galnt2
Mafa
Bmerb1
Ints6
H2bc21
H2ac21
H2ac20
H2bc4
H2ac6
Sertad2
Lasp1
Dlg4
Acadvl
Hmbs
H2ax
Pigz
Pmepa1
Gja4
Golga7
Mdga1
Lmbrd1
Gtpbp4
Akap8l
Adgre5
Habp2
Evi5
Ap3s2
Sgf29
Itga5
Hnrnpab
H4c17
Bmt2
Rarg
Ttpal
Foxo3
Klf4
Rgs18
Mrps2
1700007K13Rik
Gtf2a1
Nfyb
Unc93a2
Ppp3r1
Hjurp
A730008H23Rik
Plekha7
Gstp2
Gstp1
Fhl1
H1f4
Arrdc2
Creld1
Nodal
Tctex1d4
Plk3
Btbd19
Eif4b
Nectin2
Phf5a
Aco2
Tmem50a
Syf2
Rsrp1
Ifitm7
Wdtc1
Tmem167b
Hsp90aa1
Psmd12
Pitpnc1
Smc3
Dppa2
Btg2
Cited2
Mphosph9
2810006K23Rik
Fanci
Cnn3
Sumo1
Map10
C1qbp
Asph
Fcgr4
Sfi1
Nop58
Nufip2
Grasp
Rrn3
Kng2
Zbtb37
H4c12
H2bc15
H2ac15
Fam53c
Cdc25c
Rpl11
Ccdc92b
Angptl8
Jarid2
Tmigd1
Icam1
Smyd2
Hoxb5
Ttf1
Cfap77
Hsd17b14
Tob1
Arid5a
Trim17
H3f4
Rph3al
Nudt1
Eif4enif1
Arf4
Cotl1
Hspb8
Dusp9
Gm3448
Gm3417
Sp8
Krt15
Krt13
Asgr1
Rab37
Cpa1
Pomgnt2
Nfrkb
Abcc12
Ttk
Il17b
Sec22c
Pcx
Slc6a16
Cd37
Cyp11a1
Pus1
Ep400
Acy3
Prdx2
Junb
Caskin1
Zswim8
Chchd1
Tsc22d1
Porcn
Zdhhc18
Tefm
Ggact
Ubxn2a
Atad2b
Tcte3
Gm3435
Ubr4
Ranbp3l
Trim41
Hrob
Tpm2
Dcpp1
Hexim1
Mmp11
Gm867
Chchd10
Rab11fip2
Syngr1
Rpl3
Alg14
Calm2
Mettl7a2
Methig1
Higd1c
Map7
Rps11
Bcar1
Ankrd39
Septin1
Onecut3
Zfp827
Ppdpf
Ubc
Atp2a2
Mtg2
Coa7
Sde2
Kctd2
Atp5h
Olfr1359
Rnd3
Stra8
Chd9
Senp3
Unc93a
Tmem170
9030025P20Rik
Mybpc3
Dgke
Sirt4
Slc17a7
Rai1
Pold2
Utp14b
Hps5
Gtf2h1
Acsl3