ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX018670 | mESC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX3301664: Embryonic limb

◢ SRX3301665: Embryonic limb

◢ SRX018669: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◣ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Olfr806
Aadacl2fm1
Esr1
Tecpr1
Slc14a2
Setd4
Cbr1
Wwox
Greb1
Sympk
Abhd6
Tent5c
Hexb
Vmn2r102
Gzmk
Sbno2
Stk11
Tcstv3
Gcgr
Nkx2-6
Pcdh20
Kpna1
Cox8c
Acacb
Scn8a
Csf2ra
Olfr1274
Zfp791
Brox
Aida
Stap2
Mpnd
Gm10710
Dchs2
Sbp
Cd209a
Tacr2
Wdr92
Pno1
Tnfrsf18
Oasl1
Hrh2
Osbpl1a
E030030I06Rik
Txndc11
Mylip
Olfm1
Tmem211
Nans
Prr32
Aldh9a1
Gm17660
Crebzf
Rsph3a
Il31ra
Cerk
Creb1
Sly
Gm20931
Fbxw4
Zfp949
Iqsec1
Zfp598
Npw
Znhit1
Plod3
Atp5g1
Lexm
Tpm1
Comt
Gm21316
Gm20924
Gm20823
Gm20738
Pik3c2g
Olfr117
Spag17
Myocd
Col17a1
Olfr781
Selenok
Cldn34d
Thbs3
Mtx1
C2
Zbtb12
Ehmt2
Tprn
Tmem203
Ndor1
Obi1
Cstdc4
Zfp658
Olfr390
Olfr389
Lrch4
Fbxo24
Defb11
Cftr
Zdhhc17
Zfp46
Ankar
Ifna13
Tmem42
Tgm4
Gm20806
Aven
Pnpla8
Gtf2a2
Skint6
Wbp2
Trim12a
Rrad
Cdh16
Pald1
Grm7
F11
Prrx1
Slc33a1
Gmps
Cbr3
Coq10b
BC034090
Calr3
1700030K09Rik
Klhdc7a
Pknox1
Nol11
Lgals7
Phkg2
Ppfia3
Tmem265
Olfr741
Ms4a1
Abcd3
Commd1
Rhbdd1
Klrb1b
Zrsr1
Mstn
2610008E11Rik
Olfr1219
Awat2
Krtap3-3
Krtap3-2
Krtap3-1
Gm16445
Gulp1
Olfr850
Tbx19
Sirpb1c
Tmem132d
Rhox8
5530400C23Rik
Mettl4
Slc43a1
Polr1b
Timm10
Spn
Nagk
Nfatc2ip
Rbp4
Pde6c
Rasip1
Izumo1
Fut1
Fgf21
Gdap1
Rpl15
Nkiras1
Nadsyn1
Dhcr7
Edil3
Gm20594
Rps29
Lrr1
Zfp148
Tgif1
Ifna6
Ifna5
Pik3c2a
Spin2d
Thg1l
Lurap1l
Nudcd1
Eny2
Kbtbd3
Aasdhppt
Gstk1
Gm14595
Gm14590
Mmp25
Ifna4
Olfr99
H2-M3
Usp17le
Fah
Lhx5
Tmem178b
Galnt6
Akap12
Nemf
Arg1
Med13
Fgf22
Ubb
Frat1
Ccdc124
Cyp2t4
Pbk
Epha10
Rin2
Myoz3
Ccdc184
Asb8
Twist1
Prickle1
Ergic1
Rsph3b
Npepps
Fxr2
Olfr855
Olfr854
Hoxb13
Taar6
Taar7a
Car5a
Banp
Rassf9
Ct55
Atg12
Ap3s1
Rmi2
Zfp715
Fbxo4
Gm4925
Arl1
Olfr1158
Vmn1r167
Sh3kbp1
Taar7b
Slc34a1
Ptprm
Fbxw18
Trim34b
Olfr620
Olfr619
Olfr284
Ropn1
Olfr1102
Olfr1101
Vmn1r251
Vmn1r241
Arl13a
Abcb1b
Gadd45b
Rbm34
Lmnb2
Opa1
Msantd2
Zfp607a
Senp8
Myo9a
Glis2
Plekhg1
Shb
Myh14
Rsl24d1
Ndc80
Kdm3b
Slc38a10
Xpnpep1
Dcaf5
Dcaf10
Pold4
Asb6
Fgf5
Col6a6
Trappc2l
Galns
Dtx3
Arhgef25
Ipmk
Tle4
Rnf220
Pym1
Dgka
Guf1
Slc25a5
Zscan4f
Clk1
Anapc15
Ncam1
Atf2
Snrpn
Luzp4
Sncaip
Gm7714
Hbp1
Dpy30
Ndufb3
Fam126b
Gabarapl1
Gcnt1
Krt222
Olfr971
Trhde
Hdgfl1
Gm21258
Gm20736
Fzd3
Ghrl
Zfp641
Vmn1r13
Snurf
Olfr285
Olfr257
Bves
Adgrg4
A630073D07Rik
Trh
Dennd11
Yipf7
Klre1
Ezhip
Eda2r
Dok6
Atp2b4
Arhgap18
Tmigd1
Nrf1
Wdr72
Rcvrn
Wiz
Ccdc73
Extl3
Hic2
Rad18
Fis1
Klhl29
Disc1
Bptf
Bbs2
Psrc1
Ly6c2
Mpl
AW549877
Tyw1
Sbds
Fgf3
Plekhg4
Card11
Nudt18
2510009E07Rik
Zfp1
Mtfr1l
Tmem125
Slc18b1
Rps12
Shoc2
Bbip1
Dpep2
Mup9
Ndufaf4
Abl1
Ddx17
Usp2
C1qtnf5
Mfrp
Stx11
E030018B13Rik
Hip1
Rpgrip1
Etl4
Slc28a1
Ttc26
Fam227b
Dtwd1
Prl3c1
Cyp26a1
Grap
Tcim
Nudcd2
Hmmr
Igll1
Zdhhc3
Exosc7
Ipo11
Specc1l
Elk4
Abtb2
1700028K03Rik
N4bp2l2
Pappa2
Rprd2
Chd1l
3300002I08Rik
Dimt1
Med26
Ccdc130
Zscan4b
Tbc1d5
Zfyve26
Rad51b
Olfr594
1810037I17Rik
Zcchc13
Flrt2
Mup20
Ctxn3
Olfr482
Vmn1r203
Gm4836
Gm14819
Gm14632
Gm10487
Gm10486
Gm10230
Gm10147
Gm10096
Gm10058
Itgb2
Vmn2r42
Map4k3
Olfr805
Mat1a
Vmn2r6
Trpv5
Pou6f2
Olfr1197
Llcfc1
Defb39
Akr1b7
Zfp143
Pcbp1
Polr1d
Lnx2
Gpatch1
Plekhh3
Cntnap1
Ccr10
Ice1
Tnfrsf9
Cd1d2
Stac2
Cd1d1
Mcub
Pdcd7
Bag2
Satb2
Gja1
Zfp945
Mrpl15
Melk
Atf7ip
Sema3e
Per2
Tet2
Eprs
Adipor2
Elovl3
Cdyl2
Ccpg1os
Ccpg1
Ctsz
Tubb1
Mroh7
Fam151a
Abr
Lfng
Zfp263
Nupr1
Zhx2
2610301B20Rik
Tmem43
Chchd4
Macroh2a2
Rbks
Babam2
Dnah7b
Sspn
Hmox2
Wif1
Eif3a
Epha4
Hmgcl
Ube2h
Ypel2
Kdelr2
Ube2q2
Ikzf4
Hexim2
Olfr157
Bnip3l
Akap13
Gpr35
Mettl7b
Was
Tmem108
Pja1
Exd2
Med12
Il2rg
Gm614
Nrg1
Gale
Cenpi
Serpinb6a
Nnt
Spdye4a
Ankrd42
Scgb2b26
Olfr729
Olfr728
Pth
Cyp2c67
Csn1s2a
Ssty1
Map3k20
Gm21454
Cst10
Chrnb4
C1rl
Cst8
Treh
P2rx5
A930009A15Rik
Fyb2
Spata46
Slc28a3
Shank2
Rasgrf2
Pnma3
Pla1a
Olfr371
Irs4
Gm7694
Fgf13
E330034G19Rik
Dntt
Crhr2
Colec10
Adgre1
Taco1
Apba2
Plec
Nprl3
Ccdc166
Mrap
Mapk15
Gng13
Tmbim6
Wsb1
Nqo1
Lyrm9
Six6
Cks2
Syt12
Lrfn1
Ubp1
Grap2
Elf2
Zfp385c
Ndufa12
Katnbl1
Schip1
Cercam
Ambra1
Rarg
Slx4ip
Serbp1
Nr2f2
Wwp1
Zfp820
Olfr1031
Olfr1030
Olfr1029
Hrh1
Sprr2b
Zfp790
Ky
Bok
Tmtc1
Perm1
Olfr1228
Gm5414
Adpgk
Olfr1454
Tmem107
Vamp2
Chst11
Rarb
Nfil3
Polrmt
Tacstd2
Xrcc1
Pinlyp
Lin9
Styxl1
Mdh2
Slc39a7
Rxrb
H2-Ke6
Col11a2
Naa11
Lamc3
Hnf4a
Rplp2
Slc25a22
Pidd1
Denr
Mcl1
Vmn1r37
Fyco1
Xcr1
Nek2
Letmd1
Rbm39
Pdgfrb
Cdx1
H2ap
H2al3
Rasl10b
Supt5
Zfp566
Zfp260
Rbx1
Med1
Cdk12
Asmt
Marchf3
H3c8
Tex14
Jund
Slc15a1
Iqcn
H4c8
H2ac10
H2bc6
Slc7a15
Pibf1
Dis3
Gm525
Eapp
Arl4d
Fbxw7
Akirin2
Rad23a
Calr
Cdv3
Ube2s
Adgra2
H3c10
H2bc13
H2ac13
Bmpr1b
Oxnad1
Dph3
H4c3
H1f6
Tmem231
Gabarapl2
H3c2
H2ac4
H1f3
Farsa
Kcnk5
Efnb3
Tmem33
Erdr1
H4c2
H4c1
H3c1
Plekhb1
Camk2n1
H4c6
H3c7
H2bc9
Hivep3
H3c3
H2bc3
H4c4
H3c4
Aqp3
Ints3
Socs3
Ccdc171
BC107364
Gpx4
Trim29
H2bc7
H2ac7
Tmem181a
H1f2
Atp11b
Fubp3
Zfhx2
Thtpa
Uri1
Znfx1
Bbs1
Xbp1
Tomm5
Clec2g
H3c6
H2bc8
H2ac8
Mtf2
Ssty2
Gm21242
H4c11
H2bc12
H2ac12
Unk
H3f3b
Maneal
Tm7sf3
Med21
LOC666331
Gm11634
H4c9
H2bc11
H2ac11
Rdm1
Prdx6
Ilf2
Bcl2a1a
Taf13
Ttc39d
Srsf7
Zbtb4
Slc35g3
Polr2a
Abca3
Olfr180
Bcl2a1b
Cmip
Mkrn1
Cdk15
Fitm2
H1f1
Tctn1
Ovol2
Notch4
Abca17
Agpat5
Adcy5
Mycn
1700037H04Rik
Ier5
Srp14
Cd44
Tmem191c
Cxcl1
H3c11
H2bc22
H2bc14
H2ac22
H1f5
Dennd2c
Pspn
Clpp
Alkbh7
Brwd1
Gramd1b
Trim7
Oaz2
Vgll2
Tmem18
Gnb5
Adam5
Plbd2
Tfrc
Bcl2a1d
P4ha3
Tm2d2
Adam9
Taf4
Fbxo44
Fbxo2
Nudt4
Kat7
Hspa8
H3c15
H3c14
H2ac19
H2ac18
Dpagt1
Prxl2b
Klf2
Capns1
Trpm3
Lag3
H4bc24
H2bc23
H2ac24
H2ac23
Usp25
Ksr1
Ier2
Sub1
Ect2
Cyth4
Rhobtb1
A930033H14Rik
H4c14
H3c13
H2bc18
Mtnr1a
Kcnj16
H4c18
Poldip3
Rnf19b
Ing1
Cars2
Enpp4
Creb3l3
H4f16
H2aj
Cidea
Fam24b
Fam24a
Cuzd1
Ucp2
Hoxb4
Snai1
Ccin
Fndc3b
Taf12
Gmeb1
Foxp1
Malt1
Tmem131l
Hspa5
Mettl14
Xylb
Ei24
Pom121l2
Tcp11
Rnf13
Mreg
Prkdc
Mcm4
Rcc1
Gm36210
Cic
Trib3
Tal2
Nabp1
Tnfsfm13
Tnfsf12
Baz1b
Slc13a2
Ncor1
Srsf3
Fbxo6
Bcat2
Xpo1
Tll1
Extl1
Galnt2
Mafa
Bmerb1
Ints6
H2bc21
H2ac21
H2ac20
H2bc4
H2ac6
Sertad2
Lasp1
Dlg4
Acadvl
Hmbs
H2ax
Pigz
Pmepa1
Gja4
Golga7
Mdga1
Lmbrd1
Gtpbp4
Akap8l
Adgre5
Habp2
Evi5
Ap3s2
Sgf29
Itga5
Hnrnpab
H4c17
Bmt2
Ttpal
Foxo3
Klf4
Rgs18
Mrps2
1700007K13Rik
Ncmap
Gtf2a1
Nfyb
Unc93a2
Ppp3r1
Hjurp
A730008H23Rik
Plekha7
Gstp2
Gstp1
Fhl1
H1f4
Arrdc2
Creld1
Rab34
Proca1
Nodal
Tctex1d4
Plk3
Btbd19
Eif4b
Nectin2
Phf5a
Aco2
Tmem50a
Syf2
Rsrp1
Ifitm7
Wdtc1
Tmem167b
Hsp90aa1
Psmd12
Pitpnc1
Smc3
Dppa2
Btg2
Cited2
Mphosph9
2810006K23Rik
Fanci
Cnn3
Sumo1
Map10
C1qbp
Asph
Rusc1
Fcgr4
Rab7
Sfi1
Nop58
Nufip2
Grasp
Rrn3
Kng2
Zbtb37
H4c12
H2bc15
H2ac15
Fam53c
Cdc25c
Rpl11
Ccdc92b
Angptl8
Jarid2
Icam1
Smyd2
Hoxb5
Ttf1
Cfap77
Hsd17b14
Tob1
Arid5a
Trim17
H3f4
Rph3al
Nudt1
Eif4enif1
Arf4
Cotl1
Hspb8
Dusp9
Gm3448
Gm3417
Sp8
Krt15
Krt13
Asgr1
Rab37
Cpa1
Pomgnt2
Npffr2
Nfrkb
Abcc12
Ttk
Il17b
Sec22c
Pcx
Slc6a16
Cd37
Cyp11a1
Pus1
Ep400