ChIP-Atlas: Target genes

Potential target genes for Rfx1

Query protein: Rfx1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1161944 | MIN6B1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rfx1's Target genes

◢ Rfx1: Average

◢ SRX7671902: Embryonic brains

◢ SRX7671903: Embryonic brains

◢ SRX027337: mESC derived neural cells

◣ SRX1161944: MIN6B1

◢ Rfx1: STRING

Mks1
Gcc2
Ebna1bp2
Cfap57
Ccdc65
Saxo2
Efl1
Dync2li1
Poll
Dpcd
Ccdc39
Lman2l
Dnttip1
Tctex1d2
1110051M20Rik
Rrp12
Acox3
Ttll10
Pin1
Cenpf
E4f1
Mapk10
Dync2h1
Dcun1d5
Ralgapa1
Stxbp4
Cox11
Wdr27
1600012H06Rik
Pifo
Fsip1
Tmem138
Cyb561a3
Nsmce1
Usp30
Wdr34
Ubn2
Akap11
Gar1
Micos10
Mib2
Rhpn1
Enkd1
4933405L10Rik
Trim2
Tube1
Fam229b
Sf3b5
Pcgf5
Wdr90
1700010I14Rik
Kifbp
Ywhaq
Ropn1l
Slc25a14
Jam3
Stk32c
Lrrc27
Prdm4
Etfbkmt
Bbs1
Sgta
Shq1
Rlf
Cog7
Aopep
Tecpr2
Cinp
Acap2
Eaf2
Fanci
Tmx4
Fam131a
Fndc11
Pold3
Dym
Zdhhc1
Nacad
Sik3
Pafah1b2
Meig1
Dad1
Abhd4
Cfap44
Ccdc34
B9d1
Spout1
Hydin
Sik1
Tasp1
Etfrf1
Casc1
Pnma1
Ccdc57
Syt5
Tmem9
Rpl35a
Iqcg
Map7
Prkar1b
Dnaaf5
Eif2s1
Atp6v1d
Alkbh5
Asb1
Cyp46a1
Rnf141
Rtca
Myg1
Oscp1
Nek11
Aste1
Wdr31
Spef1
9530077C05Rik
Tmem209
Ssmem1
Cep41
Ccdc181
Srsf7
Lmna
Oxnad1
Dph3
Dcp1b
Cplane2
Cars
Casp6
Cetn4
Bbs12
Ptdss2
Ift22
Ddx41
Ehd1
Fam227b
Dtwd1
Tctn1
Wdr7
Pik3r2
Mafa
Ddx24
Foxj1
Irak1bp1
Ttc30b
Chchd6
Lsm10
Bbs9
Rfx3
Zswim1
Tbcel
Ipo4
Rundc1
Ptges3l
Cfap65
Ufsp2
1700029J07Rik
Spats1
Zc2hc1c
Acyp1
3110082I17Rik
Thnsl1
Enkur
Dyrk1b
Marchf8
Tspyl4
Nme5
Arl6
Rpf2
Smg7
Actr6
4930505A04Rik
Fam151b
Zc3h3
Tbc1d19
Mfsd4b4
Spag1
Pcsk1n
Copz1
Cxxc1
Mrpl10
Lrrc46
Klhl18
Kif9
Tsnaxip1
Ranbp10
Ccno
Ttll1
Prepl
Camkmt
Nek2
Igsf11
Cwf19l2
Lrguk
Zfp287
Mark3
Ap1s1
Maats1
Dnajc10
Dusp18
4921536K21Rik
Fbxw7
Dnajc25
Spef1l
Cdc37
Prkcsh
Ccdc151
Rnf32
Pcgf1
Tctn2
Rtl5
Smpd2
Ppil6
Zfp719
Rer1
Morn1
Tekt4
H1f10
Pds5b
Iqsec1
Stx8
Cfap52
Rpl30
Btrc
Uvrag
Sipa1l1
Rfc5
AI429214
Hnf4a
Lrrc73
Lrif1
Ubxn2b
Ptges2
Gtf2f1
Trub2
Kif18a
Agtrap
Ncald
Fam183b
Tmem167b
Ndufs5
Slf1
2210408I21Rik
Lrriq3
Fpgt
Hsdl1
Dnaaf1
Kif3b
Tmed8
Samd15
Cnot10
Dlec1
Sde2
Ttll9
Galk2
Cops2
Ssbp2
Ctnna2
Psmc3ip
Klhdc10
Ap3d1
Tex9
Orai3
Ppp2r1a
Dusp3
Chchd3
Arid4a
Naa20
Wdfy1
Ubxn11
Psmd8
Siah1b
Mrps9
Ccdc126
Fbxw9
Ttc21a
Gorasp1
Cenpj
Tob1
Capn10
Wdtc1
Apbb1
Actr1a
Wdr17
1700019D03Rik
Sema4b
Lca5l
Ppp1r7
Pask
Gas8
Lmtk3
1700016K19Rik
Otub1
Tfip11
Denn2b
Celf3
Ift172
Leng8
Derl1
Gtf3c1
D430042O09Rik
Rfx1
Sf3a1
Ccdc157
Samd4b
Gmfg
Timm10
Wdr60
Ahi1
Map1a
Rsph4a
Pole3
4933430I17Rik
Ube2o
Iqank1
Fam83h
Nap1l1
Usp29
Peg3
Armc9
Jund
Sirt3
Psmd13
Fam204a
Dynll1
Pofut2
Cdk4
Psma5
Cabin1
Lrrc6
Tsga10
Cenph
Itsn1
Cryzl1
A930007A09Rik
Mia3
Fam214a
Ift57
Lztfl1
Rpn1
Arf3
Gtf2e2
Elmod2
Trip4
Csnk1g1
Fbf1
Znhit1
Plod3
Rhbdd2
Cfap73
Tmem237
Churc1
Ankef1
Bdp1
Gemin8
2610028H24Rik
Dnah9
Eif2b2
Mtmr6
Bbs5
Cherp
Rfx5
Katnal2
Ak1
Timm13
Mycbp
Ubxn6
Bbs4
Nphp1
Map9
Lrrc49
D5Ertd579e
Rnf5
Ankrd42
Fkbpl
Ncoa5
Qtrt2
Ccdc191
Rtl6
Cfap36
Faap24
Msmo1
Pick1
E2f8
Copb2
Matk
Cfap126
Gck
Mocs3
Dpm1
Ift43
Pold2
Nqo1
Wdpcp
Mdh1
Mypop
Rpl24
Togaram1
Klhl28
Eftud2
Ccdc103
Mapre3
Cep112
Plch1
Fam234a
Adgb
Mlf1
Efcab1
Tmem231
Iqch
Aagab
Mafg
Sec22c
Ift88
Morn2
Dhx57
Cnpy3
Spice1
Nucb2
Hspa12a
Eno4
Mrpl22
Rpgrip1l
Fto
Fam98b
Lrrc56
Hras
Glipr1l3
Otud5
Atf6
Xrcc1
Pinlyp
Trit1
Wdr78
Mier1
Sorbs2
Nme7
Blzf1
Odc1
Qtrt1
Rsph9
Slc25a46
Wwox
Cfap70
Crnkl1
Cfap61
Slc27a1
Alms1
Klhdc9
Dagla
Srfbp1
Mapre2
Stk16
Glb1l
Mink1
Rrp7a
Polr3h
Dnah11
Polr2f
1700088E04Rik
Brms1
Yeats2
Nbr1
Brca1
Fbxo16
Mpp2
Dyrk1a
Glipr1l1
Cfap20
Mok
B9d2
Nudc
Per1
Dnajc1
Tdrp
Prkn
Pacrg
Nubpl
Mfsd4b1
Cfap69
Hmgcr
Dusp6
Map3k12
Rgl1
Arpc5
Spata2
Rnf114
Hmgn2
Srp72
Ctxn1
Ttc26
Efhc1
Cfl1
Tubgcp3
Nudt2
Kif24
Ppp4r3b
Asb7
Efcab12
Tom1l2
Drc3
Taok2
Mzf1
Cldn9
Traf3ip1
Map3k14
Ccpg1os
Ccpg1
Nsdhl
Cetn2
Pnmal1
Prr3
Gnl1
Rabl2
Spata7
Tmem218
Jakmip2
Cdk2ap2
Mindy4
Tada2b
Ccdc96
Dyrk3
0610010F05Rik
Usp2
Ccdc107
Pomt2
Gstz1
Nat14
Ankrd13d
Spata24
Slc25a3
Clcn3
Pigx
Cep19
Foxo6
Cystm1
U2af2
Cep162
Csnk1g2
Dmwd
Sdccag8
Cep170
Prr7
Cmtr2
Setd4
Ttc25
Rsph1
Apba1
Pak1ip1
Cfap77
Ccdc30
Cops3
Agbl3
Skiv2l
Nelfe
Ankmy1
Ccdc184
Kif23
Glb1l2
Zeb1
Zkscan7
Siva1
Spg21
Tmem184c
Prkar1a
Gmppb
Rpp38
Dctn1
Stk11ip
Tpgs1
Rsrc2
Kntc1
Rfc1
P4ha1
Odf2
Micos13
Zfp688
Cep295nl
Smpd3
Anks3
4930451G09Rik
Wdr19
Pcf11
Rps3
Zfp24
Pef1
Phactr1
Tmem216
Btbd8
Ywhaz
Mbd4
Ift122
Dpy19l1
Pnp
Mthfr
Clcn6
Ccs
Ccdc87
Azin2
Naa40
Ppm1e
Lyrm4
Fars2
Mlec
Ppp1r16a
Erf
B3galnt2
Fam161a
Ift81
Akr1e1
Zfp446
Cfap54
Dnajc16
Rfx2
Kcnip3
Cfap157
Nup50
Rnf40
Ccdc189
Trp53bp1
Pik3r4
D3Ertd751e
Spata6
Sec16a
Meak7
Clba1
Abi1
Brd3os
Dnajc24
Pkp4
Ccdc148
Cfap298
Kiz
Pacrgl
Sdcbp
Tcp11
Rpl22l1
Rap2a
Sec61a2
Ogfod2
Gm12500
Ampd2
Pspc1
Fzr1
Cibar2
Cyth2
Dnajb2
Saraf
Wdr93
Pex11a
Plp2
Med9
Ndufa8
Morn5
Arfgap2
Tmem107
Spata17
Gpatch2
Prmt5
Rsph14
Zfyve28
Cfap99
Cerkl
Tex26
Ankrd37
Katnal1
Tbc1d32
Dnajc15
Gpsm1
Snrpd2
Qpctl
Wdr73
Tpm3
Arfip1
Morn4
Fig4
Ak9
Tm9sf4
Gtf3c4
Ddx31
Armc4
1700030J22Rik
Txndc17
4933427D14Rik
Igbp1
Cipc
Pcnx4
Kti12
Wdr35
Gng4
Tbc1d16
Ccdc40
Zbtb40
Snrpf
Ing1
Knop1
Iqck
Msh5
Gde1
Ube2u
Kmt5c
Mgat1
Smim5
Abcg2
Mfn1
Josd2
Chd4
Cluap1
1700037C18Rik
Tmed10
Pih1d2
Nkapd1
Wdr13
Ift74
Phf20
Mul1
Phc2
Ttf1
Zbed5
Zfp523
Mapk15
Xrra1
Spcs2
Tctn3
Entpd1
Eif4a3
Atp1a1
Zdhhc23
Hat1
Tomm7
Tsen2
Ect2
Nfe2l1
Shoc2
Bbip1
Cdkl2
Arl13b
Smarcad1
Fam120b
Cfap410
Fbxo31
Klhl7
Hsph1
Dnal4
Lekr1
Plin5
Srsf1
Map6
Thop1
Arl2bp
Gnl2
Apobec4
Pkig
Gm35549
Cmip
Ap2a1
Stoml2
Qars
Rae1
Zfp184
Pak4
Ap1m1
Dnal1
Peli1
Aspm
E2f5
Chrm4
Iqca
Ankrd45
H13
Rab28
Eef2kmt
Sun3
Gm11992
Gpn3
Fam216a
Tuba1a
Gpr137
Bad
Ubl3
Bub1
Rfc2
2900026A02Rik
Hspa4l
Strn4
Fkrp
Ap3m2
Wars2
Gnaz
Trim39
Dalrd3
Ttc16
Ptrh1
Wiz
Rptor
Chpf2
Ift27
Dynlt1b
Dnaaf2
Thg1l
Rilpl2
Ap2b1
Ppt2
Mcm7
Ap4m1
Cabcoco1
Ssx2ip
Tufm
Camk2a
Ddx39b
Plec
Whrn
Tent5c
Zbtb5
Sppl2b
Lsm7
Trip12
Fbxo36
Nol4
Iqce
Tedc1
Cdkl1
Nav2
Trim37
Rab36
Intu
Spns1
Zc3h10
Akap13
Znrf1
Tex46
Tmem95
Cdc14a
Zfp386
Otud3
Dynlt1f
Dynlt1c
Arrdc4
Mical3
Fam227a
Cby1
Gpkow
Gm5640
Celf6
Trmt44
Tmtc3
Cep290
Drc1
Myt1l
Igsf9
Smc6
Gen1
Get3
Tmem53
Armh1
Fam167a
Tulp3
Gm14685
Fank1
Dhx32
Elapor1
1700013F07Rik
Ufm1
Stk36
Rnf25
Rbfox2
Ttll5
Erg28
Msi1
Tent4a
Evi5l
Cldn23
Usp20
BC005624
4930453N24Rik
Neurl4
2810408A11Rik
Tmem29
Brwd3
Cpd
Atf2
Entpd5
Bbof1
Pbx4
Mpc2
Dcaf6
Tnpo1
Abl1
Svip
Afg1l
Slc4a8
Fam90a1b
Apoo
Oxld1
Ccdc137
Pfkfb2
Dcaf12
Piga
Orai2
Pex11g
Zfp715
1700007K13Rik
Zfp512
Six2
Ccdc138
Nicn1
Cfap74
Cacfd1
Dhx40
Mns1
Elmo2
Cacybp
Bbs7
Sfxn2
Arl3
Get1
Fmn1
Rph3al
Zbtb14
Cfap20dc
Cfap46
Nim1k
Fech
Kdm4a
Dmxl2
Zfp687
Dctn3
Smim22
Eif2d
Fyco1
Jun
Gm21814
Hmgcs1
Ube4b
Ift52
Dnajc27
Lrrc23
Hnrnph2
Gla
Tppp3
Ttll4
Fam174a
Katnb1
Fam219a
Dnaic1
Ulk4
Arf2
Ccnb2
Spata33
Chmp1a
Zbtb6
Ttll13
Dnaaf3
Fbxl2
Repin1
Fuz
Senp1
Pfkm
Fgd4
Net1
Dcaf15
Glrx5
Poli
Ndufa13
Ankrd54
Dynlt1a
Efcab10
Ndufaf4
Efhb
Mtr
Ppp1r32
Camsap1
Steap1
Elp1
Abitram
Eif5
Nsmf
Iqcc
Sertad3
Fam76a
Cdk20
Pak6
Ptpn13
Fam161b
Coq6
Crip2
Nek4
Kcnip2
Mrpl39
Coq8b
AU041133
Zscan22
Dnaja1
Ppm1g
Calm2
Ppp1r15b
Rab11fip2
Pnkd
Tsga10ip
Tnks
Mast3
Parp8