ChIP-Atlas: Target genes

Potential target genes for Rfx1

Query protein: Rfx1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Rfx1 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rfx1's Target genes

◣ Rfx1: Average

◢ SRX7671902: Embryonic brains

◢ SRX7671903: Embryonic brains

◢ SRX027337: mESC derived neural cells

◢ SRX1161944: MIN6B1

◢ Rfx1: STRING

Yif1a
Tmem151a
Cnih2
Fam227b
Dtwd1
Tmx4
Mks1
Tex44
Xrcc1
Pinlyp
Zmynd12
Ppcs
Ccdc30
Pofut2
Cfap298
Rfx1
Wdr90
Mcrip2
3110082I17Rik
Foxj1
E4f1
1700030J22Rik
Tctex1d2
Mthfr
Clcn6
Zdhhc1
Ssbp4
Isyna1
Tecpr2
Cinp
Wdr34
Zc3h3
Ssbp2
Fam131a
Rrh
Gar1
Cfi
Jund
Iqcn
Jam3
Mapre3
Socs3
Rundc1
Ptges3l
Aarsd1
Tctn1
Cenpf
Sde2
Saxo2
Efl1
Stk40
Lsm10
Muc1
Anks3
4930451G09Rik
Lrrc56
Hras
Ncoa5
Golgb1
Eaf2
Ccdc57
Ropn1l
Fosb
Zfp839
Mok
Rtca
Dbt
Pigx
Cep19
Mycbp
Tpm3
Dnajc16
Casp9
Sik3
Pafah1b2
Smpd2
Ppil6
Ufsp2
1700029J07Rik
Map1a
Mafa
Wfdc3
Dnttip1
Ccdc181
Prkar1b
Dnaaf5
Kdelr3
Kcnj4
Dyrk1b
Ubl5
Pin1
Fbxl12
Oxnad1
Dph3
Yipf3
Polr1c
Lrrc73
Cyp46a1
Eif2b2
Fam204a
Pnma1
Fam214a
Acap2
Ubn2
Ube2o
Cfap20
Dyrk1a
Pold3
Trappc9
Cep112
Dusp18
4921536K21Rik
Stk32c
Lrrc27
Dynll1
Meig1
Dclre1c
Ddt
Cabin1
Tsga10
Lipt1
Zcchc3
Sox12
6820408C15Rik
Wdr27
1600012H06Rik
Ubxn6
Hdgfl2
Asb7
Hsdl1
Dnaaf1
Wdr66
Ift22
Klhl18
Kif9
9530077C05Rik
Ccdc34
Tlcd3b
Aldoa
Tctn2
Ankrd13d
Tppp3
Lmna
Sema4b
Mark3
Cetn4
Bbs12
Mindy4
Sik1
Metrn
Fbxl16
Ebna1bp2
Cfap57
Setd1a
Orai3
Tmem209
Ssmem1
Ptdss2
Agtrap
Rlf
Mettl15
Kif18a
Arl6
Nup50
Ovca2
Hic1
Cfl1
Wdr78
Mier1
Micos10
Trim2
Pak4
Kifbp
Rsph1
Nsmce1
Syt5
Sf3a1
Ccdc157
Rer1
Morn1
Otub1
Ift57
Fos
Wdfy1
Armc9
Kcnn1
Ccdc124
Azin2
Gcc2
Dmwd
Dmpk
Nek2
Fbxw7
Tada2b
Ccdc96
Ap1s1
Map9
Dcp1b
Zswim1
Spata25
Ctsa
Eif2s1
Atp6v1d
Bbs5
Dnajc10
Lztfl1
Usp30
Svop
Ywhaq
Serf1
Bdp1
Nek11
Aste1
Gdf1
Cers1
Gtf3c1
D430042O09Rik
Samd4b
Gmfg
Bbc3
Trit1
Cplane2
Irak1bp1
Mcidas
Ccno
Tsnaxip1
Ranbp10
Rabl2
Leng8
Ehd1
Dad1
Abhd4
Map6
Rnf141
Ing1
Cars2
Mib2
Morn2
Dhx57
Tlx2
Pcgf1
Lbx2
Tmem91
Tgfb1
B9d2
Arrdc3
H1f10
B9d1
E2f8
Chd4
Dnajc1
1110051M20Rik
Marchf8
Akap11
Pitpnm1
Cdk2ap2
Mapre2
Tmem9
Prkcsh
Ccdc151
Rpl30
Erich5
Tubgcp3
Per1
Csnk1g2
Odf2
Traf3ip1
Stxbp4
Cox11
Cirbp
Mapk8ip1
1700029I15Rik
Prepl
Camkmt
Rpgrip1l
Fto
Dnajc25
Shq1
Cfap74
Ubxn2b
Etfrf1
Casc1
Prdm4
Josd2
Aspdh
Spout1
Endog
Tox2
Nme7
Blzf1
Adgb
Fbl
Sdcbp
Etfbkmt
Cep162
Cep41
Tmem237
Snapc2
Ctxn1
Bbs1
Ptges2
Lcn2
Crnkl1
Cfap61
Ppp1r16a
Foxh1
Wdr31
Bspry
Sipa1l1
Traf3
Taok2
Mpc2
Dcaf6
Mast3
Cherp
Ralgapa1
Tfip11
Rfc5
Ttll10
Elmod2
Adgrg1
Smg7
Ccpg1os
Ccpg1
Rhbdd2
Itsn1
Cryzl1
Ccdc39
Dync2li1
Ppp2r1a
Sec61a2
Tcstv3
Zfp24
Lyrm4
Fars2
Thnsl1
Enkur
Mink1
Sirt7
Pycr1
Mafg
Nucb2
Usp2
Tmem167b
Taf13
Ttc21a
Gorasp1
Rpn1
Oscp1
Rpl35a
Lmln
Iqcg
Mbd4
Ift122
Txndc17
Med31
4933427D14Rik
4930563E22Rik
Sirt3
Psmd13
Tmem107
Tspan31
Marchf9
Cdk4
Gtf2e2
Ubxn11
Osbpl7
Mrpl10
Lrrc46
Cd52
Capn10
Ywhae
Pifo
Nudt2
Kif24
Rlbp1
Fanci
Stk11ip
Mlec
Trmt44
Acox3
Tube1
Fam229b
Tmem138
Cyb561a3
Pold2
Hmgcr
Ttc39d
Srsf7
Hydin
Lrguk
Fank1
Dhx32
Cfap65
Rhpn1
Psmc3ip
Mlx
Agbl3
Cars
Dync2h1
Dcun1d5
Poll
Dpcd
Rap2a
Crocc
Wdr7
Wdr6
Cdc37
Katnal2
Slamf9
Igsf9
Gstt2
Zfp580
U2af2
Ccdc106
Igsf11
Ankef1
Rara
Zfp688
Wdr60
Tbc1d32
Iqce
Brat1
Zfp523
Spice1
Eif4a3
Card14
Ap1m1
Cfap54
Dagla
Hspa12a
Eno4
Dusp6
Sun3
Gm11992
Cln6
Tm9sf1
Ipo4
Nr1d1
Chchd3
Naa40
Plch1
Spata7
Rpf2
Ap3m2
Ak1
2900026A02Rik
Caly
Dym
Efhc1
Tasp1
Cfap69
Dnah9
Sfi1
Eif4enif1
Prr7
Ccar2
9930012K11Rik
Tcea2
Sox18
Tarbp2
Map3k12
Cfap44
Efcab1
Cnpy3
Dnah2
Dyrk3
Arf3
Trip12
Fbxo36
Cfap36
Prmt5
Nectin4
Klhdc9
Rin1
Brms1
B4gat1
Ccdc184
Asb8
Dpf1
Ppp4r3b
Gtf2f1
Ankrd54
Katnal1
Pkig
Lrrc6
Maats1
Cox17
Pomt2
Pik3r2
Gstz1
Casp6
P4ha1
Hsph1
D3Ertd751e
Spata24
Prob1
Alkbh5
Nap1l1
Mtmr6
Snrpd2
Qpctl
Srf
Cul9
Mrps9
Dok3
Ddx41
Chchd6
Ankfy1
Tekt4
Sf3b5
Pds5b
N4bp2l2
Gde1
Ccp110
Dixdc1
Msmo1
Iqca
Zfp287
Rp9
Bbs9
Klf2
Brd3os
Ap3d1
Ccdc13
Mfsd4b4
Intu
Pak1ip1
Togaram1
Slc25a3
Klhl28
Tomm7
Msi1
Kif23
Ccdc65
Nbr1
Brca1
Acot1
Ywhaz
Rfx3
Cog7
Dpy19l1
Stoml2
Pigo
Fam214b
Smdt1
Qtrt2
Pheta2
Naga
Ccdc191
Lman2l
Ifi27
Ddx24
Spats1
Mocs3
Dpm1
Phf20
4930505A04Rik
Rnf5
Agpat1
Sh3bgr
Lca5l
Trub2
Ift81
Ahi1
Sdccag8
Cep170
Pick1
Bub1
Thbs3
Mtx1
Cfap43
Cmtr2
Ndufaf3
Impdh2
Dalrd3
Klhdc10
Fam98b
Knop1
Iqck
Zfp36l2
Fam151b
Mafk
Tex9
Arid4a
Rrp12
Tpi1
Spsb2
Rsph14
Rab36
Mlf1
Srms
Fndc11
Med9
Lrrc49
Slc25a46
Hmgn2
Erdr1
Cluap1
1700037C18Rik
Slc25a14
Prr3
Gnl1
Abcf1
Srek1
D5Ertd579e
Tmem231
Gabarapl2
Celf3
Spg21
Parp4
Cenpj
Rrp7a
Sertad3
Tnpo1
Dffb
Cep104
Zbtb46
Nsdhl
Dynlt1b
Cetn2
Trpm2
Cfap410
Ppm1e
Dnaja1
Ttll13
Rgl1
Arpc5
Bbs4
Ss18l2
Sec22c
Arvcf
Derl1
Dlg4
Id2
Afg1l
1700010I14Rik
Gnl2
Gpn3
Fam216a
Spag1
Polr2k
Ndufs5
Aopep
Prkar1a
Abi2
Cnot10
Cdc14a
Ogfod2
Arl6ip4
Slf1
2210408I21Rik
Ttll1
Spata6
Cipc
Cacfd1
2310030G06Rik
Phc2
Hat1
Kiz
Psma5
Ccdc126
Tent5c
Setd4
Cbr1
Timm10
Smtnl1
Wdr35
Smc6
Gen1
Kti12
Abhd2
Fzr1
Dohh
Kcnj14
Cyth2
Zfyve28
Dctn1
Cfap99
Trip4
Csnk1g1
Thop1
Sgta
Copz1
Arfip1
Tbcel
Tedc1
Crip1
Tmtc3
Cep290
Odc1
Fbf1
Fasn
Iqsec1
Kif6
4933434E20Rik
1700094D03Rik
Iqch
Aagab
Cldn34d
Znhit1
Plod3
Ptpn13
Gnat2
Gm12500
Ampd2
Fstl3
Rnf40
Mapk10
Ccdc189
Tbc1d19
AI429214
Spef1l
Fam161a
Asb1
Tmem211
Gsg1
Ttc26
Fam183b
Spcs1
Glt8d1
Pard6a
Enkd1
Actr6
Acd
4933405L10Rik
Brox
Aida
Pfdn5
Myg1
Psap
Plin5
Plin4
Lrg1
Gnaz
Pcsk1n
Eras
Dnal1
Kcnip3
Ap2a1
Sytl3
Tdrp
Fscn2
Actg1
Cenph
Rtl5
Zfp667
Zfp628
Ssc5d
Nat14
Npcd
Cbx6
Dner
Dusp3
Cfap97d1
Wdr73
Usp29
Peg3
Nmb
Neurl4
Acap1
2810408A11Rik
Tmc3
Dnaaf3
Psmd8
Lrriq1
Churc1
Txndc11
Gemin8
Map7
Ttc41
Hsp90b1
Sec16a
Acadvl
Dbn1
Efcab12
Elfn2
Ppm1g
Sfxn2
Arl3
1700037H04Rik
Mzf1
Rusf1
Tpgs1
Madcam1
Spef2
Tsen2
Lrrc10b
Plcd1
Dlec1
Meak7
Stx8
Cfap52
Kif14
Adgra1
Copb2
Trim39
Pkd1
Rab28
Ccdc187
Pi4k2a
Morn4
Skiv2l
Nelfe
Ube2b
Cdkl3
Lrrc23
Eno2
Ccdc74a
Ttll9
Erf
Kmt5c
Nek4
Itih1
Ttc25
Ralgds
Foxo6
Nap1l4
Rab11fip2
Dnal4
Zfp775
Repin1
Gm5111
Ip6k2
Dynlt1f
Dynlt1c
Tspyl4
Vps13a
Rsph4a
A930007A09Rik
Pnkd
Spata2
Rnf114
Pyroxd1
Ttc30b
Akna
Fsip1
Fzd3
Fbxo16
Ttll3
Mns1
Zc2hc1c
Acyp1
Tmem216
Mgat1
Dhx16
Tmem53
Armh1
Cdca4
Plec
Ift88
Nanos2
Mypop
Bbs7
Kif3b
Arl4a
Orai2
Klhl7
Gmppb
Dnah11
Amigo3
Slc27a1
Nxnl1
Hspbp1
Brsk1
Slc4a8
Lmtk3
Gm5741
Fbxw9
Junb
Hook2
Nemp1
Mrpl39
Pcnx4
Zswim2
Tor3a
Ccnc
Notch1
Wdr54
1700003E16Rik
Mrpl22
Gemin5
Ppp5c
D230025D16Rik
Timm13
Lmnb2
Prkn
Pacrg
Nudc
Nr0b2
Rfx2
Tctn3
Mapk15
Entpd1
Nkiras2
Dnajc7
Rpp38
Acbd7
Nme5
Spef1
Cenpb
Galk2
Cops2
P4htm
Wdr19
Dnajb2
A630095N17Rik
Qtrt1
Sufu
Actr1a
Ndufa8
Morn5
Midn
Nphp1
Mtln
Cystm1
Ttll5
Erg28
Syna
Clip2
Ift172
Gckr
Fndc4
Glb1l2
Glipr1l3
Caps2
Pef1
Get1
Ska1
Cxxc1
Glipr1l1
Zbtb22
Tapbp
Rgl2
Wdr17
Lmbrd1
Tob1
Pkp4
Fam227a
Ccdc148
Cby1
Cbx5
Atg9b
Tmem218
Ddit4
Sit1
Ccdc107
Mdk
Chrm4
Atp23
Faap24
Dstn
Ung
Zfp719
Calm2
Klf10
Cfap46
Sgsm1
Ubl3
Hspa4l
Mrpl58
Fam90a1b
Apoo
Pde6g
Oxld1
Hgs
Ccdc137
Arl16
Gdpgp1
Cib1
Ankrd42
Saraf
Leprotl1
Cep128
Aspm
Kdm4a
Eri3
Pbx4
Lpar2
Rfc1
Aatk
Rapgef4
Dnajc24
Mul1
Lrp8
Stk35
Wdr13
Xrra1
Spcs2
Gata2
Dennd2a
Ppp1r7
Pask
Alms1
Denn2b
Ssx2ip
0610010F05Rik
Lrif1
Lrriq3
Fpgt