ChIP-Atlas: Target genes

Potential target genes for Rfx1

Query protein: Rfx1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX027337 | mESC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rfx1's Target genes

◢ Rfx1: Average

◢ SRX7671902: Embryonic brains

◢ SRX7671903: Embryonic brains

◣ SRX027337: mESC derived neural cells

◢ SRX1161944: MIN6B1

◢ Rfx1: STRING

Pofut2
Ube2o
Sik3
Pafah1b2
Rfx1
Zdhhc1
Jund
Fam227b
Dtwd1
Azin2
2900026A02Rik
Dpy19l1
Ncoa5
Mks1
1700030J22Rik
Ccdc30
Traf3ip1
Xrcc1
Pinlyp
Mthfr
Clcn6
Wdr34
Dnttip1
Mycbp
Dynll1
Sik1
Lrrc73
Acap2
Foxj1
Tsga10
3110082I17Rik
Abi2
Smpd2
Ppil6
Anks3
4930451G09Rik
Ssbp2
Sde2
Chd4
Wdfy1
Cfap298
Pigx
Cep19
Gar1
Pkig
Hsdl1
Dnaaf1
Ppp1r16a
Ankrd13d
Map6
Dyrk1b
E4f1
Map1a
Cenpf
Wdr90
Mafa
Prkar1b
Dnaaf5
Mafg
Jam3
Srek1
Dnajc25
H1f10
Dyrk3
Ufsp2
1700029J07Rik
Meig1
Rundc1
Ptges3l
Klf2
Saxo2
Efl1
Zfp36l2
Sdcbp
Tctn1
Ctxn1
Zc3h3
Dffb
Cep104
Rabl2
Dyrk1a
Pold3
Fam214a
Cetn4
Bbs12
Agtrap
Rhbdd2
Dagla
Wdr78
Mier1
Ccdc57
Fank1
Dhx32
Fam131a
Oxnad1
Dph3
Pak4
Nudt2
Kif24
Eif2b2
Nup50
Cyp46a1
Naa40
Samd4b
Gmfg
Tnpo1
Ing1
Phf20
Sfi1
Mok
Marchf8
Zfp523
Stk32c
Lrrc27
Dner
Lsm10
Tecpr2
Cinp
Arl4a
Elmod2
Pnma1
Ttc21a
Gorasp1
Rtca
Rap2a
Ccno
Iqce
Tmx4
Tctex1d2
Cdc37
Ropn1l
Npcd
Cbx6
Ccar2
Leng8
Tmem237
Msmo1
Wdr27
1600012H06Rik
Nek11
Aste1
Ift57
Sec61a2
Ywhaz
Fasn
Ptdss2
Ccdc74a
E2f8
Dixdc1
Zfp24
Tmem107
Mark3
Ift22
Ccdc181
Ccdc34
Kif18a
Mpc2
Dcaf6
Ankfy1
Gnaz
Lrrc10b
Sf3a1
Ccdc157
Armc9
Wdr60
Hmgn2
Ehd1
Spcs1
Glt8d1
Per1
Ywhae
Cacfd1
Cep112
Odf2
Thbs3
Mtx1
Pnkd
Mapre3
Ap1m1
Cnpy3
Lrrc56
Hras
Cabin1
Ubxn6
Ankrd54
Cep41
Pkd1
Mast3
Pcgf1
Ogfod2
Klf10
Dnajc1
Odc1
Mindy4
Taok2
Nsmce1
Katnal1
Lmna
Dhx16
Tada2b
Ccdc96
Rab11fip2
Dennd2a
Rfc5
Trit1
Otub1
Rnf141
Bub1
Cars
9530077C05Rik
Gtf3c1
D430042O09Rik
Adgra1
Crnkl1
Cfap61
Mapre2
Zfp688
D5Ertd579e
Ubxn2b
Cfap20
Pyroxd1
Intu
Map3k12
Rgl1
Arpc5
Ywhaq
Tbc1d32
Akirin1
Morn2
Dhx57
Tubgcp3
Trip12
Fbxo36
Dmwd
Igsf9
Rer1
Morn1
Afg1l
Hspa4l
Ahi1
Adgb
Spata6
Irak1bp1
Erf
Prr7
Dcp1b
Cfap410
Tfip11
Gtf2e2
Abhd2
Fbxw7
Txndc17
4933427D14Rik
Ssx2ip
Pds5b
Arl6
Xpr1
Nap1l1
Cdc14a
Eaf2
Tent5c
Vps13a
Fam204a
Ppp5c
Dnaja1
Eri3
Klhl7
Eml1
Zfp653
Igsf11
Dalrd3
Kif23
Dnajc16
Klf4
Lyrm4
Fars2
Ubn2
Mlec
1700037H04Rik
Tpm3
D3Ertd751e
Celf3
Bdp1
Csnk1g2
Zfyve28
Cfap99
Lca5l
Gdpgp1
Cib1
Rrp7a
Spata24
Knop1
Iqck
Capn10
Asb7
Spice1
Chrm4
Ift81
Repin1
Skiv2l
Nelfe
Rpgrip1l
Fto
Fam222a
Ttll13
Hat1
Brd3os
Dnal1
Kiz
B9d2
Ubxn11
Rpn1
Cdca4
Iqch
Aagab
Ccdc102a
Ccdc184
Tsr1
Sgsm2
Gnl2
Med9
Bbs5
Cfap74
Tmem209
Ssmem1
Stk11ip
Snx13
Shq1
Nek2
Spata7
Tent4a
Stxbp4
Cox11
Cep162
Hspa12a
Eno4
Chchd6
Ipo4
Lmbrd1
Lztfl1
Stox1
Gcc2
Ap1s1
Plxnb2
Dstn
Dhx30
Rfx2
Eif2s1
Atp6v1d
Acox3
Cherp
Tsnaxip1
Ranbp10
Hsph1
Slc25a3
Msi1
Tspan3
Sec22c
Eif4a3
Sfxn2
Arl3
Casp6
Trim37
Spata33
Chmp1a
Mrps9
Trim39
Ccpg1os
Ccpg1
Sirt3
Psmd13
Zfp664
Ccdc92
Ttll5
Erg28
Akap11
Negr1
Tmem53
Armh1
Stk35
Phc1
Cdk4
Cplane2
Arf3
Tmtc3
Cep290
Tsen2
Nucb2
Ankef1
Dmxl2
Sys1
Mpc1
Oxld1
Ccdc137
Pomt2
Gstz1
Efhc1
Sun3
Gm11992
Rnf139
Cnot10
Galnt2
Cfap69
Nbr1
Brca1
Foxn2
Eif5
Orai2
Ralgapa1
Nbas
Ppm1g
Nek4
Rpl30
Nphp1
2610524H06Rik
Trim36
Tmem260
Nemp1
Prkar2b
Cbx5
Mtmr6
Poll
Dpcd
Sppl2b
Lsm7
Ptges2
Gm1673
Spout1
Plec
Tmem231
Rfc1
Ip6k2
2610301B20Rik
Prkar1a
Cdkl3
Rsph1
Nme7
Blzf1
Wdr31
Tomm7
Cfap43
Zc3h14
Prr3
Gnl1
Cep43
Arhgap39
Snrpd2
Qpctl
Pold2
Cluap1
1700037C18Rik
P4ha1
Dnajc10
Slf1
2210408I21Rik
Nr2f6
Fam161a
Togaram1
Klhl28
Josd2
Cacng4
Kif3b
Fam81a
Tedc1
Smc6
Gen1
Gmppb
Ppm1e
Ccdc13
Tasp1
Micos10
Naga
Tor3a
Cep135
Hmgcr
Tagap1
Wdr73
Neurl4
2810408A11Rik
Spg21
Arfip1
Pgam1
Wdr35
Sertad3
Creld2
Alg12
Gpn3
Fam216a
Rab36
Trim9
Tbc1d19
Bbs7
Tctn2
Nsdhl
Cetn2
Zswim1
Ddx41
Ift88
Dnah9
Otud3
Dag1
Ptpro
Klhl18
Kif9
Mbd4
Ift122
Chmp4b
Safb
Safb2
Ccnc
Clba1
Prepl
Camkmt
Ica1l
Prkcsh
Ccdc151
Tmem250-ps
Arl2bp
Dusp18
4921536K21Rik
Entpd7
Pitpna
Naa35
Alms1
Cipc
Tex9
Ptpn13
Cog7
Icmt
Fsd1l
Lrguk
Brms1
Syt5
Gde1
Spaca9
Ak8
Ndufaf6
Ndc1
Map9
Fam90a1b
Apoo
Cep128
Inpp4a
Sipa1l1
Kndc1
Bclaf1
U2af2
E2f5
Ngef
Gatd1
Rap1gap
Agbl3
Stx18
Prkaa1
Cep126
Trub2
Kif6
Cfap36
Xrra1
Spcs2
Ntm
Sec16a
Cibar1
Ubr7
Gon7
Gm20604
Tmem17
Tctn3
Entpd1
Vps35
Orc6
Neurl1a
Ubl3
Ttll4
Get1
Tmem216
Pfn2
Psmc3ip
Lyst
Slc35a1
Cox20
Dusp6
Rsph14
Mrpl10
Lrrc46
Eef2kmt
Ptpn1
Enkd1
4933405L10Rik
Tapbp
Calm2
Lmln
Wdr54
1700003E16Rik
Fzr1
Hsp90aa1
Usp30
Ddr1
Lpin2
Rtl5
Dync2li1
B9d1
Ccdc126
Bloc1s1
Ring1
Srsf7
Dnal4
Fam110a
Stk19
Dxo
Rnf5
Sec14l1
Chn1
Rlf
Kifbp
Kif3a
Wdr7
Cdk2ap2
Yipf5
Fam219a
Dnaic1
Ddx20
Copb2
Mlf1
Rpf2
Pgs1
Ndufab1
Phc2
Rpgr
Slc25a46
1700113H08Rik
Fam160a2
Cacybp
Zscan18
Agbl4
Fbxl2
Kifc3
Ip6k1
Sdccag8
Cep170
Slc4a8
Mrpl39
Braf
Opcml
Bola1
Baiap2
Lyrm1
Dcun1d3
Dym
Ddx24
Ankrd42
Mgat1
Erich2
Usp20
BC005624
Klhdc10
Fam167a
Rhpn1
Tulp3
Tusc3
D230025D16Rik
Timm13
Dnajb2
Cystm1
Qsox2
Nipbl
Hcn4
Cmtr2
Dph6
Yipf3
Polr1c
Pnmal2
Uhrf1
Clcn4
Oscp1
Mib2
Tmem64
Ap3d1
Timm21
Fbxo15
Pik3r2
Mapkbp1
Zswim2
Rab28
Itsn1
Cryzl1
Pick1
Bbs4
Mrpl58
Ttll1
Usp29
Peg3
Trdmt1
Pltp
Pcyt1a
4930453N24Rik
Znhit2
Ndufaf4
Prmt5
Gpr137
Bad
Axdnd1
Bbs9
Fndc11
Ttc25
Syt17
Eif4g3
Tgfbrap1
AI597479
Bbs2
Slc25a14
Dynlt1b
Gabarapl2
Traf3
Meak7
Edem3
Tmem167b
Ube4b
Trim24
Ebna1bp2
Cfap57
Prdm4
Btbd9
Fanci
Aopep
Sema4b
Sypl
Spata2
Rnf114
Ttc13
Arv1
Ncs1
Mex3c
Rasal2
Cxxc1
Bud13
Tnfrsf19
Nabp2
Dnah10
Ercc6l2
Unc119b
Cpd
Tubb4b
Cops3
Derl1
Fbxw9
Dhx37
Cmss1
Arid4a
Scamp1
Pgap3
Wdr19
Pemt
Bbs1
Polr2f
1700088E04Rik
Tmem43
Chchd4
Cfap221
Etfbkmt
Pak1ip1
Fbrs
Slc35a2
Id1
Fbxl14
Cfap58
Pm20d2
Cfap299
Vwa3b
Rsph3a
Ptpn4
Fth1
Rnf182
Crem
Papola
H13
Mia3
Wrap53
Trp53
Lpcat4
Mocs3
Dpm1
Gemin8
Lrriq3
Fpgt
Usp6nl
Gtf2f1
Wars2
Phtf1
Poc1b
Galnt4
Plch1
Camk2a
1500009L16Rik
Gfpt2
Zfp287
Oaz2
Ppt2
Gmfb
Fgr
Ndufs5
Adsl
Lmtk3
Zfp280c
Cebpb
Spats1
Marchf10
Rufy2
Cemip2
Pacsin1
Ulk4
Galk1
Ppme1
C2cd3
Xpnpep3
St13
Nphp4
Kcnab2
Pcm1
Rexo1
Mzf1
Nsmf
Ppp1r7
Pask
Smg7
Gas8
Tbl1xr1
Cfap46
Crip2
Dnajc27
Rfc2
Selenof
Hs2st1
Rpl35
Parp8
Glb1l2
Ift74
Styxl1
Mdh2
Gtf3c4
Ddx31
Gpr135
Dennd4a
Morn4
Sf3b5
Sqle
Pcnx4
Trim33
Ddx59
Dis3l2
Fam174a
Bcl2l1
Jun
Fam98b
Mfn1
Arhgap19
Ptpra
Tollip
Naa20
Stk16
Glb1l
Gorasp2
Cnnm2
Hgs
Arl16
Mtf1
Dlx2
Atp1a1
Dipk2a
Rab3ip
Atf2
Cplane1
Cbx8
Nubpl
Wdr48
Tube1
Fam229b
Tpt1
Nr4a3
Fbf1
Xylb
Cep120
Cfap206
Zfp768
Lrrc6
Gm12500
Ampd2
Tnks
Fnip2
Elp1
Abitram
Snx24
Gna11
Tbcel
Ift43
Arf2
Ccnb1
Zc2hc1a
Pkp4
Ccdc148
Gtf2ird2
Rnf11
Cibar2
Lca5
Sh3gl3
Usp42
Tcp11
Tmem9
Zdhhc23
Phldb1
Camsap1
D630045J12Rik
Kif17
Thada
Hnrnpf
Foxo6
Cpeb2
Lman2l
Dnajc30
Bud23
Plin5
Trim2
Cenpj
Hspbp1
Celf6
Rspry1
Psme3ip1
Ppp4r3b
Usp21
Traf4
Spag1
Ttll3
Dnah11
Whrn
Slc43a2
Rtn1
Lcorl
Nagk
Rbks
Babam2
Dynlt1f
Dynlt1c
Etfrf1
Casc1
Zeb1
Tbc1d16
Ccdc40
Adarb1
Taf11
Zmynd10
Qtrt1
Rpl22l1
Ttc26
Nim1k
Sap18b
Sap18
Ap2a1
Rae1
Senp6
Mul1
Cdk9
Arl8a
Ccdc138
Actr1b
Ddx55
Sf3b4
Naa30
Cfap54
Txlna
Tusc2
Ap2s1
Magi1
Dop1a
Cyth2
Asb1
Kctd17
Zbtb11
Mns1
Psma5
Snrpg
Ccdc134
Bdh1
Hrob
4930505A04Rik
Rnf32
Sik2
Nav2
Abhd17b
1110059E24Rik
Enox1
Shisa7
Plxnb1
Pakap
Tdp1
Efcab11
Ufm1
Spire2
Atr
1700065D16Rik
Matk