ChIP-Atlas: Target genes

Potential target genes for Rfx3

Query protein: Rfx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Rfx3 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rfx3's Target genes

◣ Rfx3: Average

◢ SRX7671906: Embryonic brains

◢ SRX7671907: Embryonic brains

◢ SRX1161945: MIN6B1

◢ Rfx3: STRING

Sema4b
Tmx4
Ssbp2
Sik3
Pafah1b2
Zdhhc1
Mks1
Wdr90
Chd4
Rfx1
Bbs5
Ccdc30
Ncoa5
Sdcbp
Srsf7
Pnma1
Pold3
Gar1
Ufsp2
1700029J07Rik
Anks3
4930451G09Rik
Hydin
Pin1
Ccdc57
Dnttip1
Elmod2
Fam227b
Dtwd1
Nudt2
Kif24
Cfap44
Dync2h1
Dcun1d5
Mapre3
Pigx
Cep19
Wdr34
Xrcc1
Pinlyp
Samd4b
Gmfg
Dnajc16
Wdr31
Ccdc181
Sik1
Ropn1l
Map9
B9d1
Syt5
9530077C05Rik
Tctn1
Fam214a
Tecpr2
Cinp
3110082I17Rik
Rundc1
Ptges3l
Poll
Dpcd
Eif2b2
Srek1
Arl6
Morn2
Dhx57
Fbxw7
Eaf2
Dync2li1
Cfap298
Cfap54
Akap11
Ccdc39
Saxo2
Efl1
Pofut2
Map1a
Cfap20
Map6
Dusp18
4921536K21Rik
Dad1
Abhd4
Tctex1d2
Prdm4
Irak1bp1
Iqsec1
Tctn2
Mindy4
Fanci
Nucb2
Eif4a3
Lztfl1
Kifbp
Ttll10
Tmem138
Cyb561a3
Meig1
Cdk4
Ppm1e
Cfap65
Sipa1l1
Gtf2f1
Prr7
Cetn4
Bbs12
Fam204a
Rfx3
Wdr60
Prkcsh
Ccdc151
Lrrc49
Tsnaxip1
Ranbp10
Dyrk3
Foxj1
Stk32c
Lrrc27
Dyrk1a
Ptpn13
Myg1
Mlec
Klhl18
Kif9
Kif18a
Rpl30
Lmbrd1
Fam131a
Txndc17
4933427D14Rik
Cep162
Dyrk1b
Hspa12a
Eno4
Ccdc34
Lmtk3
Wdr27
Csnk1g2
1600012H06Rik
Mink1
Cep112
Ube2o
1700030J22Rik
Tmem9
Cabin1
Rtca
Agtrap
Pak1ip1
Bbs1
E4f1
Lrrc73
Cplane2
Jam3
Wdfy1
Mafg
Etfbkmt
Josd2
Wdr78
Mier1
Usp30
H1f10
Sf3a1
Ccdc157
Marchf8
Rnf141
Phc2
Zc3h3
Nek2
Cnpy3
Sde2
Lrriq1
Cep41
Ccdc65
Oxnad1
Dph3
Cfap36
Lca5l
Ccdc158
Maats1
Ywhaq
Katnal2
Orai3
Prr3
Gnl1
Ywhaz
Ubn2
Ankrd13d
Rer1
Morn1
Pcgf1
Hspbp1
Rnf32
Morn4
Eri3
1110051M20Rik
Brd3os
Zfp24
Rsph1
Tsga10
Pifo
Zfp523
Trip4
Smpd2
Ppil6
Csnk1g1
Oscp1
Ankfy1
Trim2
Lrrc56
Hras
Gcc2
Trub2
Tube1
Fam229b
Cherp
Nup50
Sirt3
Psmd13
Ccdc184
Ptdss2
Prepl
Iqch
Camkmt
Aagab
Rhbdd2
Etfrf1
Casc1
Gemin8
Efcab1
Fndc11
Prkar1a
Gde1
Tasp1
Tada2b
Ccdc96
Ubxn6
Ebna1bp2
Cfap57
Mrpl10
Lrrc46
Prkar1b
Ift57
Dnaaf5
Naa40
Timm10
1700010I14Rik
Spef1l
Brms1
Tbc1d32
Mycbp
Wdr35
B9d2
Chchd6
Tbcel
Spef2
Katnal1
Spats1
Ddx41
Ap1s1
Ankef1
Dnajc1
Mok
Nbr1
Brca1
Ralgapa1
Trit1
Smg7
Armc9
Dynll1
Itsn1
Cryzl1
Jund
Mib2
D3Ertd751e
Lsm10
Tmem237
Pick1
Ttll9
Nap1l1
Pak4
Traf3ip1
Hsdl1
Dnaaf1
Ctxn1
Tnpo1
Dffb
Cep104
Agbl3
Dagla
Lrrc6
Rlf
Tbc1d19
Orai2
Ccdc113
Mapre2
Dmwd
Klhdc10
Acap2
Thnsl1
Ing1
Enkur
Cenpf
Lrguk
Micos10
Ppp1r7
Pask
Ap1m1
Mthfr
Clcn6
AI429214
Nek11
Aste1
Cfap97d2
Lyrm4
Fars2
Uvrag
Dnajc10
Crnkl1
Cfap61
Ubxn11
Fank1
Dhx32
Celf3
Spata6
Ppp1r16a
Cyp46a1
Cfap43
Stoml2
Mfsd4b4
Dcp1b
Cdk2ap2
Acox3
Rhpn1
Rgl1
Arpc5
Sun3
Spice1
Gm11992
Mark3
Msmo1
Ppp2r1a
Camk2a
Tmem216
Nat14
Sertad3
Ddx24
Kmt5c
Intu
A930007A09Rik
Cfap69
Asb7
Gm12500
Ampd2
Tmem209
Ssmem1
Igsf11
Phf20
Zfyve28
Cfap99
Ift81
Nsmce1
Ccpg1os
Ccpg1
Ak1
Ift22
Gtf2e2
Slc4a8
Actr6
Lmna
Fam183b
Cenpj
Rnf182
Mapk10
Rfc5
Plch1
Gpn3
Fam216a
Hat1
Sec61a2
Sf3b5
Rab11fip2
Abi2
Fam151b
Dlec1
Ccno
Neurl4
2810408A11Rik
Gtf3c4
Ddx31
Abhd2
Odf2
Spata2
Rnf114
Stk11ip
Mbd4
Ift122
Klf2
Tfip11
Ehd1
Lcorl
Phc1
Trip12
Nme7
Fbxo36
Blzf1
Alms1
Spg21
Leng8
Ndufs5
Cdk9
Rpn1
Ywhae
Kcnip3
Hmgn2
Tmem167b
Rabl2
Setd4
Msi1
Ccar2
Bub1
Tubgcp3
Chchd3
Tmem107
Ahi1
Ubxn2b
Usp29
Peg3
Mafa
Thbs3
Mtx1
Kiz
Nsdhl
Cetn2
Pkig
Taok2
Dnajc7
Ap3d1
Dnajc27
Efhc1
Spag1
Qtrt2
Ccdc191
Knop1
Iqck
Cfap74
Ankrd54
Slf1
Rap2a
2210408I21Rik
Psmc3ip
Tomm7
Mtf1
Ift74
Dnajc15
Hsph1
Tmem17
Rtl6
Pltp
Shq1
Trim39
Mrps9
Map3k12
Ipo4
Dnajc25
Afg1l
Stx8
Cfap52
Spata7
Stxbp4
Cox11
Sgta
Slc25a14
1700016K19Rik
Fam98b
Cog7
Rpl35a
Iqcg
Med9
Ppp5c
Dusp6
Dusp3
Snrpd2
Qpctl
Cenph
Ap3m2
Skiv2l
Nelfe
Spcs1
Glt8d1
Armc3
Mpc2
Dcaf6
Glb1l2
Fam90a1b
Apoo
Dnaja1
Dnaaf2
Ptges2
Gtf3c1
D430042O09Rik
Nacad
Lrrc23
Mlf1
Mypop
Eif2s1
Atp6v1d
Pomt2
Gstz1
Zc2hc1c
Acyp1
Ift52
Cmtr2
Tekt4
Gnaz
1700037H04Rik
Mzf1
Tex9
Cystm1
Cacfd1
Cfap221
Tsen2
Zdhhc23
Capn10
Ift88
Zfp36l2
4930505A04Rik
Fez1
Tmem231
Rrp7a
Aopep
Odc1
Rrp12
Cfap410
Rnf5
Cdkl1
Kif3b
Dner
Wdpcp
Mdh1
Dhx16
Rpgrip1l
Fto
Pspc1
P4ha1
Uhrf1
Cdc37
Tctn3
Sdccag8
Entpd1
Cep170
Galk2
Erf
Cops2
Bdp1
Arid4a
Mrpl39
Ttc26
Klhdc9
Adgb
Ccdc13
Igsf9
Cyth2
Stx18
Sfxn2
Pitpnm1
Nsmf
Arl3
Sec16a
Nr2f2
Nme5
Dnah11
Zswim1
Dym
Ift172
Glipr1l1
Mast3
Hmgcr
Cbx5
Safb
Safb2
Pnkd
Ppp4r3b
U2af2
Kif23
Derl1
Sorbs2
Tmtc3
Cep290
Peli1
Ttc21a
Gorasp1
P4htm
Pbx4
D5Ertd579e
Tmem218
Tpgs1
Ulk4
Braf
Tsr1
Sgsm2
Nphp1
Mapk15
Tdrp
Fam81a
Ankrd45
Drc1
Dnah9
Chn1
Mapk7
Dnal1
Prmt5
1500009L16Rik
Casp6
Ccdc126
Map7
Rfx2
Fsip1
Glipr1l3
Zfp688
Dnaaf3
Wdr13
Bbs9
Mrpl22
Zmynd10
Per1
Cfap161
Timm13
Plin5
Iqce
Spout1
Lekr1
H13
Tmem260
Rbks
Babam2
2410004P03Rik
Copz1
Cdca4
Agbl4
Wdr73
Eif5
Klhl7
Fbf1
Fzr1
2900026A02Rik
Rsph4a
Pcsk1n
4930453N24Rik
Zfp287
Slc25a3
Cluap1
1700037C18Rik
Gnl2
Nsun7
Jun
Tnks
Whrn
Pik3r2
Hspa4l
Matk
Arl4a
Dlg4
Kifc3
Tusc3
Tent5c
Dynlt1b
Sys1
Ccdc74a
Mcm7
Ap4m1
Wdr7
Fam227a
Cby1
Stk19
Dxo
Ssx2ip
Dnajc24
Azin2
Otub1
Togaram1
Klhl28
Smc6
Gen1
Bbs7
Mocs3
Dpm1
Psma5
Hsp90aa1
Spata24
Akirin1
Axdnd1
Arfip1
Ankrd42
Arf3
Cplane1
Rab36
Stk16
Glb1l
Smpd3
Dpy19l1
Polr2f
1700088E04Rik
Tbc1d16
Ccdc40
Galnt2
Enkd1
4933405L10Rik
Tcp11
Rnf139
Zc3h10
Celf6
E2f8
Chrm4
Wwox
Rsph14
Cfap20dc
Denn2b
Bbs4
Pgap3
Repin1
Ctnna2
Cars
Plxnb1
Cep135
Naa20
Map3k14
Stk35
Fbxl2
Crip2
Sfi1
Lrriq3
Fpgt
Rpp38
Rpl24
Eftud2
Ccdc103
Calm2
Pkd1
Wars2
Cep128
Tuba1a
Zfp184
Pds5b
Tedc1
Pold2
Stpg1
Nipal3
Smarcad1
D230025D16Rik
Rasal2
Med31
4930563E22Rik
Srfbp1
Cipc
Mfsd4b1
Cfl1
Adgra1
Slc27a1
Cibar2
Bcl2l1
Dennd2a
Sap18b
Sap18
Fgr
Timm21
Fbxo15
Dalrd3
Ap2a1
Ccnc
Dhx30
Zeb1
Armc4
Ttc41
Hsp90b1
Coq3
Dynlt1f
Dynlt1c
Fam167a
Dnal4
Wdr17
Fbxl14
Fam110a
Tpm3
Jakmip2
Ppm1g
Iqca
Prkar2b
Wdtc1
Mns1
Cep164
Spaca9
Ccdc180
Ak8
Aspm
Spata17
Gpatch2
Arf2
Rtl5
Mpc1
Klhl3
Qars
Slc25a46
Pkp4
Ccdc148
Pik3cd
Tulp3
Fkbpl
Znhit1
Plod3
Dcaf12
Rpf2
Rpl35
Lrrc10b
Fig4
Dixdc1
Ak9
Cfap58
Dpy19l2
Cwf19l2
Npcd
Cbx6
Spef1
Coa8
Bag5
Qsox2
Marchf10
Ogfod2
1700094D03Rik
Foxn2
Get1
Nbas
Yeats2
Cfap46
Alkbh5
Tagap1
Pih1d2
Nkapd1
Kif6
Rsph3b
Zfp407
Mfn1
Efcab10
Copb2
Cpd
Wdr19
Fbxw9
Lpin2
Itgb3bp
Fam161a
Efcab7
Tmem53
Mtmr6
Cep43
Armh1
Tspyl4
Rab28
Churc1
Epb41l4a
Dstn
Cibar1
Lman2l
Coq8b
Pex11g
Negr1
Zfp719
Lyrm1
Dcun1d3
2610524H06Rik
Foxo6
Cdc14a
Mapkbp1
Gas8
Plp2
Pyroxd1
Wdr54
1700003E16Rik
Dmxl2
Btrc
Enox1
Wdr93
Pex11a
Stk33
Fam120b
Zfp664
Ttll3
Stox1
Ccdc92
Tufm
Nemp1
Gmppb
Cdkl2
Stam2
Ndufaf4
Rps6kc1
Gtf2ird2
Tom1l2
Drc3
Cdkl4
Nek4
Dis3l2
Meak7
Gdpgp1
Cib1
Pnmal1
Parp8
Cwc25
Ttll1
1700113H08Rik
Pgs1
Hspa2
Actr1a
Dnajb2
Riiad1
Mex3c
Ttll13
Entpd7
Cxxc1
Zswim2
Cldn9
Faap24
Cfap45
Ttc25
Trim33
Usp20
BC005624
Pcf11
Ccdc134
Vps13a
Klf4
Ruvbl1
Lrif1
Hcn4
Odf2l
Lrpprc
Cyb561
2610301B20Rik
Spata33
Chmp1a
Tmem29
Ano3
Pacrgl
Gm1673
Arrdc4
Nqo1
Prkaa1
Trim36
Ppp1r11
Ddx59
Btbd9
Cep126
Ccdc138
Psmd8
Zbtb40
E2f5
Btbd17
Xpr1
Shoc2
Bbip1
Rfc1
Cnnm2
Yipf5
Bloc1s1
Fsd1l
Dhx40
Fam161b
Coq6
Trp53bp1
Ptpn4
Plec
Trim9
Ppil4
Pcnx4
Zbed5
Spns1
Ttll4
Dnaaf4
Mgat1
Clba1
Tgfbrap1
AI597479
Zmat2
Eml1
Cops3
Rpl22l1
Srp72
Crocc2
Ngef
Wdr47
Ip6k2
Elapor1
Ccp110
1700013F07Rik
Elp1
Abitram
Klf10
Oxld1
Ccdc137
Xpnpep3
St13
Snx13
Ubxn10