ChIP-Atlas: Target genes

Potential target genes for Rfx1

Query protein: Rfx1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Rfx1 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rfx1's Target genes

◣ Rfx1: Average

◢ SRX7671902: Embryonic brains

◢ SRX7671903: Embryonic brains

◢ SRX027337: mESC derived neural cells

◢ SRX1161944: MIN6B1

◢ Rfx1: STRING

Fam227b
Dtwd1
Tmx4
Mks1
Xrcc1
Pinlyp
Ccdc30
Pofut2
Cfap298
Rfx1
Wdr90
3110082I17Rik
Foxj1
E4f1
1700030J22Rik
Tctex1d2
Mthfr
Clcn6
Zdhhc1
Tecpr2
Cinp
Wdr34
Zc3h3
Ssbp2
Fam131a
Gar1
Jund
Jam3
Mapre3
Rundc1
Ptges3l
Tctn1
Cenpf
Sde2
Saxo2
Efl1
Lsm10
Anks3
4930451G09Rik
Lrrc56
Hras
Ncoa5
Eaf2
Ccdc57
Ropn1l
Mok
Rtca
Pigx
Cep19
Mycbp
Dnajc16
Sik3
Pafah1b2
Smpd2
Ppil6
Ufsp2
1700029J07Rik
Map1a
Mafa
Dnttip1
Ccdc181
Prkar1b
Dnaaf5
Dyrk1b
Oxnad1
Dph3
Lrrc73
Cyp46a1
Eif2b2
Fam204a
Pnma1
Pin1
Fam214a
Acap2
Ubn2
Ube2o
Cfap20
Dyrk1a
Pold3
Cep112
Dusp18
4921536K21Rik
Stk32c
Lrrc27
Dynll1
Meig1
Cabin1
Tsga10
Wdr27
1600012H06Rik
Ubxn6
Asb7
Hsdl1
Dnaaf1
Ift22
Klhl18
Kif9
9530077C05Rik
Ccdc34
Tctn2
Ankrd13d
Sema4b
Mark3
Cetn4
Bbs12
Mindy4
Sik1
Ebna1bp2
Cfap57
Orai3
Tmem209
Ssmem1
Ptdss2
Agtrap
Rlf
Kif18a
Arl6
Nup50
Wdr78
Mier1
Micos10
Trim2
Pak4
Kifbp
Rsph1
Nsmce1
Syt5
Sf3a1
Ccdc157
Rer1
Morn1
Otub1
Ift57
Wdfy1
Armc9
Azin2
Gcc2
Dmwd
Nek2
Fbxw7
Tada2b
Ccdc96
Ap1s1
Map9
Dcp1b
Zswim1
Eif2s1
Atp6v1d
Bbs5
Dnajc10
Lztfl1
Usp30
Ywhaq
Bdp1
Nek11
Aste1
Gtf3c1
D430042O09Rik
Samd4b
Gmfg
Trit1
Cplane2
Irak1bp1
Ccno
Tsnaxip1
Ranbp10
Rabl2
Leng8
Ehd1
Dad1
Abhd4
Map6
Rnf141
Ing1
Mib2
Morn2
Dhx57
Pcgf1
B9d2
H1f10
B9d1
E2f8
Chd4
Dnajc1
1110051M20Rik
Marchf8
Akap11
Cdk2ap2
Mapre2
Tmem9
Prkcsh
Ccdc151
Rpl30
Tubgcp3
Per1
Csnk1g2
Odf2
Traf3ip1
Stxbp4
Cox11
Prepl
Camkmt
Rpgrip1l
Fto
Dnajc25
Shq1
Cfap74
Ubxn2b
Etfrf1
Casc1
Prdm4
Josd2
Spout1
Nme7
Blzf1
Adgb
Sdcbp
Etfbkmt
Cep162
Cep41
Tmem237
Ctxn1
Bbs1
Ptges2
Crnkl1
Cfap61
Ppp1r16a
Wdr31
Sipa1l1
Taok2
Mpc2
Dcaf6
Mast3
Cherp
Ralgapa1
Tfip11
Rfc5
Ttll10
Elmod2
Lmna
Smg7
Ccpg1os
Ccpg1
Rhbdd2
Tpm3
Itsn1
Cryzl1
Ccdc39
Dync2li1
Ppp2r1a
Sec61a2
Zfp24
Lyrm4
Fars2
Thnsl1
Enkur
Mink1
Mafg
Nucb2
Tmem167b
Ttc21a
Gorasp1
Rpn1
Oscp1
Mbd4
Ift122
Txndc17
4933427D14Rik
Sirt3
Psmd13
Tmem107
Cdk4
Gtf2e2
Ubxn11
Mrpl10
Lrrc46
Capn10
Ywhae
Pifo
Nudt2
Kif24
Fanci
Stk11ip
Mlec
Acox3
Tube1
Fam229b
Tmem138
Cyb561a3
Pold2
Hmgcr
Srsf7
Hydin
Lrguk
Fank1
Dhx32
Cfap65
Rhpn1
Psmc3ip
Agbl3
Cars
Dync2h1
Dcun1d5
Poll
Dpcd
Rap2a
Wdr7
Cdc37
Katnal2
Igsf9
U2af2
Igsf11
Ankef1
Zfp688
Wdr60
Tbc1d32
Zfp523
Spice1
Eif4a3
Ap1m1
Cfap54
Dagla
Hspa12a
Eno4
Dusp6
Sun3
Gm11992
Ipo4
Chchd3
Naa40
Plch1
Spata7
Rpf2
Ak1
2900026A02Rik
Dym
Efhc1
Tasp1
Cfap69
Dnah9
Sfi1
Prr7
Ccar2
Map3k12
Cfap44
Efcab1
Cnpy3
Dyrk3
Arf3
Trip12
Fbxo36
Cfap36
Prmt5
Klhdc9
Brms1
Ccdc184
Ppp4r3b
Gtf2f1
Ankrd54
Katnal1
Pkig
Lrrc6
Maats1
Pomt2
Pik3r2
Gstz1
Casp6
P4ha1
Hsph1
D3Ertd751e
Spata24
Alkbh5
Nap1l1
Mtmr6
Snrpd2
Qpctl
Mrps9
Ddx41
Chchd6
Iqce
Ankfy1
Tekt4
Sf3b5
Pds5b
Gde1
Msmo1
Iqca
Zfp287
Bbs9
Klf2
Brd3os
Ap3d1
Mfsd4b4
Intu
Pak1ip1
Togaram1
Slc25a3
Klhl28
Tomm7
Msi1
Kif23
Ccdc65
Nbr1
Brca1
Ywhaz
Rfx3
Cog7
Dpy19l1
Stoml2
Qtrt2
Naga
Ccdc191
Lman2l
Ddx24
Spats1
Mocs3
Dpm1
Phf20
4930505A04Rik
Rnf5
Lca5l
Trub2
Ift81
Sdccag8
Cep170
Pick1
Bub1
Thbs3
Mtx1
Cmtr2
Dalrd3
Klhdc10
Fam98b
Knop1
Iqck
Zfp36l2
Fam151b
Tex9
Arid4a
Rrp12
Mlf1
Fndc11
Ccdc13
Med9
Lrrc49
Slc25a46
Hmgn2
Cluap1
1700037C18Rik
Slc25a14
Prr3
Gnl1
Srek1
Tmem231
Celf3
Rpl35a
Iqcg
Spg21
Cenpj
Rrp7a
Sertad3
Tnpo1
Dffb
Cep104
Nsdhl
Dynlt1b
Cetn2
Cfap410
Ppm1e
Dnaja1
Ttll13
Rgl1
Arpc5
Bbs4
Sec22c
Derl1
Afg1l
1700010I14Rik
Gnl2
Gpn3
Fam216a
Spag1
Ndufs5
Aopep
Prkar1a
Rab36
Abi2
Cnot10
Cdc14a
Ogfod2
Slf1
2210408I21Rik
Ttll1
Spata6
Cipc
Cacfd1
Phc2
Hat1
Kiz
Psma5
Ccdc126
Tent5c
Setd4
Timm10
Wdr35
Smc6
Gen1
Kti12
Abhd2
Rsph14
Fzr1
Cyth2
Zfyve28
Cfap99
Trip4
Csnk1g1
Copz1
Arfip1
Tbcel
Dixdc1
Tmtc3
Cep290
Sgta
Odc1
Fbf1
Fasn
Iqsec1
Kif6
1700094D03Rik
Iqch
Aagab
Znhit1
Plod3
Ptpn13
Gm12500
Ampd2
Cfap43
Rnf40
Mapk10
Ccdc189
Tbc1d19
AI429214
Spef1l
Fam161a
Asb1
Ahi1
Tedc1
Ttc26
Fam183b
Spcs1
Glt8d1
Enkd1
Actr6
4933405L10Rik
Myg1
Plin5
Gnaz
Pcsk1n
Dnal1
Kcnip3
Ap2a1
Tdrp
Cenph
Rtl5
Nat14
Npcd
Cbx6
Dner
Dusp3
Usp29
Peg3
Neurl4
2810408A11Rik
Dnaaf3
Psmd8
Lrriq1
Churc1
Gemin8
Map7
Sec16a
Efcab12
Ppm1g
Sfxn2
Arl3
1700037H04Rik
Wdr73
Mzf1
Rusf1
Tpgs1
Spef2
Tsen2
Lrrc10b
Dlec1
Meak7
Stx8
Cfap52
Adgra1
Copb2
Trim39
Pkd1
Rab28
Morn4
Skiv2l
Nelfe
Cdkl3
Lrrc23
Ttll9
Erf
Kmt5c
Nek4
Ttc25
Foxo6
Rab11fip2
Dnal4
Repin1
Ip6k2
Dynlt1f
Dynlt1c
Tspyl4
Vps13a
Rsph4a
A930007A09Rik
Pnkd
Spata2
Rnf114
Pyroxd1
Ttc30b
Fsip1
Ttll3
Mns1
Zc2hc1c
Acyp1
Tmem216
Mgat1
Dhx16
Tmem53
Armh1
Cdca4
Plec
Ift88
Mypop
Bbs7
Kif3b
Arl4a
Orai2
Klhl7
Gmppb
Dnah11
Slc27a1
Hspbp1
Slc4a8
Lmtk3
Fbxw9
Mrpl39
Pcnx4
Zswim2
Tor3a
Ccnc
Wdr54
1700003E16Rik
Mrpl22
Ppp5c
D5Ertd579e
D230025D16Rik
Timm13
Prkn
Pacrg
Nudc
Rfx2
Tctn3
Mapk15
Entpd1
Dnajc7
Rpp38
Nme5
Spef1
Galk2
Cops2
Wdr19
Dnajb2
Actr1a
Ndufa8
Morn5
Nphp1
Cystm1
Ttll5
Erg28
Ift172
Glb1l2
Glipr1l3
Pef1
Get1
Dlg4
Cxxc1
Glipr1l1
Tapbp
Wdr17
Lmbrd1
Fbxo16
Pkp4
Fam227a
Ccdc148
Cby1
Cbx5
Tmem218
Ccdc107
Chrm4
Faap24
Dstn
Zfp719
Calm2
Klf10
Cfap46
Ubl3
Hspa4l
Mrpl58
Fam90a1b
Apoo
Oxld1
Ccdc137
Gdpgp1
Cib1
Ankrd42
Cep128
Aspm
Kdm4a
Eri3
Pbx4
Rfc1
Dnajc24
Mul1
Stk35
Wdr13
Xrra1
Spcs2
Dennd2a
Ppp1r7
Pask
Alms1
Denn2b
Ssx2ip
0610010F05Rik
Lrif1
Lrriq3
Fpgt
Stox1
Cwf19l2
Btrc
Rnf32
Ccdc113
Gpr137
Bad
Eef2kmt
Rtl6
Zfp653
Abl1
Stk16
Glb1l
Qtrt1
Akirin1
Cfap20dc
Nacad
Dnajc27
Gpr19
Ccdc138
Tob1
Stx18
Peli1
Wdtc1
Atp1a1
Rsrc2
Kntc1
Trim37
Spata17
Gpatch2
Cfap73
Bloc1s1
Ift27
Saraf
Smpd3
Polr2f
1700088E04Rik
Camk2a
Cops3
Mia3
Map3k14
Uvrag
Crocc2
Gas8
Yeats2
Entpd7
Tuba1a
Jun
Eftud2
Ccdc103
Nsmf
Ulk4
Ttc41
Hsp90b1
Cdkl1
Tcp11
Tufm
Sppl2b
Lsm7
Gm973
2610301B20Rik
Coq8b
Sorbs2
Lekr1
1700016K19Rik
Arl2bp
Phc1
Ccdc74a
Atf6
Usp20
BC005624
Parp8
Dnajc15
Zeb1
Rpl22l1
Xpr1
Jakmip2
Otud5
Fig4
Ak9
Med31
4930563E22Rik
4930453N24Rik
Drc1
Qars
Srfbp1
Matk
E2f5
Usp2
Polr3h
Wars2
Wdr93
Pex11a
Fkbpl
Ttf1
Ccdc180
Wdpcp
Rps6kc1
Mdh1
Catip
Cfap97d2
Pspc1
Cfap77
Safb
Safb2
Tmem219
Tmem17
Edem3
Tbc1d16
Ccdc40
Clba1
Spaca9
Ak8
Tspan3
Nqo1
Fam219a
Dnaic1
Shoc2
H13
Bbip1
Ddx39b
Ift43
Cep164
Cibar2
Zdhhc23
Trp53bp1
Nbas
Dhx40
Ccdc102a
Zfp664
Pnp
Ccdc92
Rsph9
Mex3c
2610524H06Rik
Cpd
Fbxl2
Zbed5
Tmem64
Fam167a
Zmynd10
Bclaf1
Ap2b1
Yipf3
Polr1c
Pex11g
Dcaf12
Myo10
Fam76a
Fam110a
Spata33
Chmp1a
Tmem95
Rpl35
Naa20
Ift74
Ap3m2
Ttll4
Tubb4b
Pcf11
Whrn
Tom1l2
Ptpn4
Drc3
Tent4a
Mpc1
Brat1
Tulp3
Iqcc
Cfap221
Nubpl
Xylb
Nfe2l1
Fez1
Wwox
Nemp1
2410004P03Rik
Ccs
Ccdc87
Pitpna
Arf2
Cfap58
Dnaaf2
Gtf3c4
Ddx31
Ctnna2
Klf4
Evi5l
Rpl24
Tex26
Celf6
Hcn4
Coq3
Hsp90aa1
B3galnt2
1700019D03Rik
Pltp
Mtmr14
1500009L16Rik
Nim1k
Rasal2
Spns1
Actr1b
Zfp446
Rfc2
Cacybp
Tsr1
Sgsm2
Tmem108
Igbp1
Fam222a
Zfp512
Eif5
Bud13
Zfp386
Cfap70
Prkar2b
Cfap157
Tmed8
Samd15
Smarcad1
Fam81a
Tgfbrap1
AI597479
Timm21
Fbxo15
Dmxl2
Tm9sf4
Ip6k1
Bola1
Dipk2a
Mfsd4b1
Tmed10
Ift52
Srsf1
Arrdc4
Sys1
Tnks
Mtr
Elp1
Abitram
Nav2
Pacrgl
Nphp4
Kcnab2
Rps3
Znhit2
Ccnb2
Otud3
Thop1
Braf
Pole3
4933430I17Rik
Fam161b
Coq6