ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8018228 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◣ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ CPSF3: STRING

H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
COX20
VPS28
VEZF1
H2AZ1
DNAJB14
DUX4
CTDSP1
VPS52
RPS18
B3GALT4
RRP36
MEA1
KLHDC3
ZC3H10
RPL41
ESYT1
WDR37
IDI1
SYNRG
GH1
CSHL1
CIRBP
FAM174C
EFNA2
RABL6
CCDC183
COL23A1
NECAB3
ACTL10
SGSM3
POLR2J3
SCRIB
FRG2C
VPS9D1
EDC4
KMT2A
ZNF34
RPL8
POLG2
DDX5
ZNF581
ZNF580
CCDC106
DONSON
THAP9
SEC31A
PHF23
GABARAP
DVL2
TLCD1
RPL23A
RAB34
NEK8
FRG2
INPP5E
RHBDL1
WDR24
STUB1
JMJD8
ID2
EPN1
SNAP47
JMJD4
H3-3A
DPH7
PRRT2
MAZ
UBE2M
CHMP2A
PAGR1
RNASEK
C17orf49
BCL6B
MRPL2
KLC4
CUL7
TARS3
ZWILCH
SNAPC5
RPL4
ENAH
OTUD7B
IRF2BP2
PCDH9
BTNL9
PIP4K2B
MVP
HYI
NUMBL
C19orf48
LOC105372440
ACP4
CCDC200
TMEM132A
MMP24OS
MMP24-AS1-EDEM2
GPAA1
EXOSC4
MRPS16
DNAJC9
ZNF862
NANOS1
ADNP
NRAS
RIT1
AKAP8
ZNF513
SNX17
EIF2B4
GGA2
H2BC5
H1-4
ADARB1
DYRK1B
EIF3L
ANKRD54
TMEM230
PCNA
ATP6V0C
AMDHD2
ABTB1
GTF2IRD2B
ZNF653
CABYR
BCAP29
SETD1A
ORAI3
HNRNPU
SUMF2
RPL17-C18orf32
RPL17
C18orf32
MEMO1
RPLP0
GCN1
NAXE
GPATCH4
PCNX2
MTHFS
H2BC21
H2AC21
H2AC20
MTRF1L
MAN2C1
HIPK1
RAB4A
RACK1
RPS5
CTNNAL1
NAA10
ARHGAP4
CHAF1B
SECISBP2
CKS2
DLG4
ACADVL
FNBP1
NUDT4B
CHD2
TAF10
RRP8
ILK
TPP1
RCOR3
ID3
SDCCAG8
CEP170
SHC1
PYGO2
PBXIP1
LOC101928120
RRM2
MPDU1
LOC100996842
EIF4A1
CD68
ST3GAL3
CXorf38
SH3BGRL3
COMMD3-BMI1
COMMD3
BMI1
SLC25A10
MRPL12
ZNF865
ZNF524
FIZ1
CCDC138
PRR7
STIMATE-MUSTN1
STIMATE
KCTD5
H3C13
H2BC18
TOM1
FOXP1
AKAP5
MAML1
POGZ
WDR48
SCN11A
DENND4B
LMBR1
FBXL3
ATP5F1E
PRELID3B
PPP3CB
KLF9
ECI1
RPEL1
PRRC2A
AIF1
MORC3
SYCE2
MRM1
DHRS11
SLC25A53
FAM199X
TRIM8
AKT3
VANGL2
KIF27
MORF4L1
SMIM19
SLC20A2
HDHD5
NCOA7
RUFY2
TYMP
SCO2
ODF3B
SEC61A2
PABPN1
SRSF11
MRPL40
HIRA
PPFIA4
KLF12
TGDS
GPR180
ZNF398
GPS2
EIF5A
RPL26
KRBA2
C7orf26
LAMTOR3
AGK
ZFAND6
MAPK8IP3
C6orf226
EXOSC6
DPY19L4
ADCK2
TGM1
RABGGTA
SIMC1
NCAM2
CACFD1
FAM76A
SPATA1
GNG5
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
LATS1
ZNF207
C17orf75
PEX7
STC2
RNF139
PANK3
HOXA3
HOXA4
PEAK3
OAZ1
CYB561D1
ATXN7L2
LRRC37A3
HMGN2
RBM26
FAM219B
ZNF326
IL10RB
SLC25A42
KDM3B
AGO3
PHIP
EDEM1
ZBTB26
RABGAP1
SYNGAP1
PHF1
CUTA
FLOT2
DHRS13
KAT6A
ACBD6
TBK1
TIMM13
SMYD2
ZFP37
NBPF1
PHF19
UGT1A4
UGT1A3
FSTL3
KANSL1
ARHGAP35
AP2S1
STRIP1
SCAI
LSS
EPB41
PRRC2B
GPX1
B3GALNT2
OPN3
CHML
FAM131A
H4C2
H3C2
H2AC4
H4C1
TM2D3
PIDD1
REV3L
SLC25A22
CEND1
SLC44A5
H4C9
H2BC11
H2AC11
DERA
ATXN7
CELF1
UBXN2A
DESI2
ZNF197
TADA1
POMT1
CLK3
EGLN1
MRPS34
EME2
NME3
SPSB3
USP21
UFC1
PPOX
POMZP3
PDCD2
CNIH4
H1-2
H3C3
NDUFB2
SOD2
RPS6KB2
ZNF445
GATA2
CARNS1
ACBD3
BOLA3
CLCN5
TEX38
ATPAF1
DNAJC25-GNG10
DNAJC25
KANSL3
FER1L5
NEU1
HFM1
CYB5R1
ADIPOR1
H4C5
H3C4
H2BC7
H2AC7
SLAIN1
TMEM223
TMEM179B
ADAM17
RPL7
RDH10
MRPS18B
ATAT1
DAPK3
POLR2C
PACS1
SKIDA1
MLLT10
MSI2
NOXA1
STMP1
CD320
ARHGEF11
CCZ1B
BACH1
PPP4R2
EPM2A
TRIM65
MRPL38
AKT2
PLPP5
NEIL1
TUBGCP6
HDAC10
YBEY
MCM3AP
MAPK12
KMT5B
ZNF148
KIAA1522
NDST2
UCKL1
NUB1
ABL2
RPL27A
BRAF
PXK
TRIM3
TIMM10B
ARFIP2
SCAMP3
FAM189B
RHOU
EFCAB2
FUT11
CHCHD1
TP53BP2
WIZ
FARP2
TMEM35B
C8orf76
DDX59
PHACTR2
PPP2R5D
PEX6
RPS27A
CLHC1
C1orf21
NRN1
LRRC24
C8orf82
SS18L2
SEC22C
NKTR
NOTCH2NLC
NUP93
IKZF4
OCRL
FOSL2
UNC119
DENND2B
MLLT6
TTC21A
GORASP1
KCNJ4
ACADM
SSRP1
P2RX3
TOMM20L
NFAT5
ZNF48
TBC1D5
TBC1D10B
MYLPF
TPTEP2-CSNK1E
E2F3
PACSIN3
ARFGAP2
PRKAG1
C5orf24
WDR27
C6orf120
RBM5
SRSF4
PYCR2
GDI1
FAM50A
ATP6AP1
PRKAG2
GGPS1
ARID4B
GOLGA6L4
ZBED6CL
LRRC61
ACTR3C
DISC1
ARL5A
TSPAN10
NPLOC4
GOLGA1
RNF220
CLN5
LRRFIP2
TMEM184B
RAD23A
CALR
BAG2
VARS1
CISD3
LIN9
CAMTA1
PIN4
FAM20B
SATB1
TPGS2
TIRAP
PGP
PATJ
E4F1
MAN1A2
TFAP2A
ABHD17A
FBF1
MARCHF7
COX5A
DNAH14
WDTC1
TRAPPC8
MIER1
DNAI4
POLR3GL
LIX1L
ANKRD34A
INTS9
HMBOX1
MOV10
FAM118A
TRMU
PARP1
TMED9
B4GALT7
KMT2C
CZIB
TPK1
AP1S2
ZNF621
KCTD3
ICA1L
H4C3
H1-6
NDUFAF3
DALRD3
GTPBP6
IMPDH2
JAK1
ZNF786
RAP2C
CMTM6
MRI1
C19orf53
MYBL2
LMO7
ZNF341
GTPBP3
ANO8
MAP3K2
TRAF4
FAM177A1
MKRN1
PDE6D
COPS7B
NADSYN1
DHCR7
TICRR
KHDRBS1
GPR137
ZNF35
SMARCD2
BTBD1
MPC2
DCAF6
EXOG
RECQL4
LRRC14
MPP5
REEP2
ZNF76
URB2
TAF5L
GET4
SRCAP
LOC730183
MACROD1
TMUB1
FASTK
AGAP3
GAB2
SIRT7
PCYT2
MAFG
RAD54L2
CDC42BPA
SP1
NF2
ARID3B
EYA4
RNF4
ZNF771
PHC2
THRB
EDARADD
NCR3LG1
TMA7
CCDC51
ATRIP
SP3
VPS36
CKAP2
HEBP2
SNX5
MGME1
ZNHIT2
TM7SF2
FAU
TBXAS1
HIPK2
PRKRIP1
TXLNA
ROM1
EML3
B3GAT3
PURA
NUDT16L1
GATAD2B
YWHAZ
LRRC37B
ACAT2
BCKDK
VKORC1
PAM16
PITPNM2
PSMA4
DOCK7
CAPZA2
SEMA3B
HNRNPF
SPDYE5
POM121C
CCSER2
TNFRSF6B
MRPL28
CAPN7
PPIL2
CCSAP
HGSNAT
SLC37A3
RAB19
FOCAD
PPP1CC
RABIF
CCDC130
SCARF1
RILP
EZH2
SQSTM1
MGAT4B
MAT2B
DNAJC11
SETD6
TAOK2
UBA2
CUL1
ERLIN1
PIP5KL1
DPM2
TLL2
BRWD1
MTARC1
DSG2
CD276
SETMAR
AMMECR1L
DRD4
INTS5
GANAB
NCKIPSD
PUM2
CSTB
NAT10
GPC4
GTF2I
TBC1D4
TSEN54
LLGL2
CASKIN2
SPECC1L
UQCC3
LBHD1
CSKMT
C11orf98
ZBTB37
PCBD2
TIGD3
KANSL1L
ZNF77
SAMD1
C19orf67
THAP3
DBN1
STK40
URGCP
URGCP-MRPS24
CHUK
OVCA2
XYLB
YIPF3
POLR1C
LRRC73
ZNF706
RPS11
RANBP6
KIAA2026
IQGAP1
TTC13
TFAP4
GMPPB
AMIGO3
FBXW2
NID1
KIF23
IBA57
ZBTB6
RC3H2
PLPPR3
ARHGEF12
NUDT3
PDE4DIP
RAD54L
MSX2
EIF3C
ATXN10
CD2AP
EIF3CL
NUDT1
MRM2
MAD1L1
ATF3
CCDC38
AMDHD1
UNC119B
MSRB2
PHGDH
CACNA2D3
NOXO1
SYNGR3
GFER
GPN2
NUDT4
STX6
DHX9
SUMO2
MAPK8IP2
TSEN15
STAU1
LPGAT1
SIT1
CCDC107
ARHGEF39
PTCH1
PBRM1
GNL3
ELOA
RPL6
RIPK1
PTPN11
GALNT2
NUAK1
FAM149B1
ECD
PDE8A
PWP2
LOC102724159
HORMAD1
AQP11
USP6NL
USF2
TMEM250
VWA7
SCFD1
PAFAH1B1
UBA3
ARL6IP5
IAH1
FBXO10
NMD3
RUVBL1
EEFSEC
MFSD14A
YBX1
SELENOK
ACTR8
UTP4
DERPC
CHTF8
SEMA4B
STX7
RALGDS
THSD1
TMPPE
GLB1
SETD5
CELSR3
MIB1
HDLBP
KLHL25
NOMO3
SEPTIN2
NOMO1
FYN
WEE2
DENND11
GCLC
YWHAB
H3C1
H1-1
SSX2IP
TRIM52
CIZ1
VPS26A
ACTN2
GINM1
DNM1
ATXN2
MARCHF6
JPT2
MYCBP2
CTF1
BCL7C
ZNF644
SNX7
RTN4
PCSK6
ATXN7L3
TAOK1
KCTD18
OSBPL1A
FPGS
ANKRD36B
ZNF282
SBNO1
ZNF860
OSBPL10
H4C4
FAM207A
NCOA2
UNC5A
TAB2
MBOAT2
RFX1
WDR73
NMB
LMNB1
POGLUT3
NANS
IMPACT
CAPRIN2
DCUN1D4
ZNF629
IL13RA1
SH3D19
TPM4
DCT
C20orf144
NFKBIA
LONP1
CYREN
CATSPERD
SLC44A3
ZDHHC21
C1orf198
TTLL4
GAGE2C
GAGE2B
GAGE2A
GAGE1
GAGE12H
GAGE12E
GAGE12D
GAGE12C
COG2
CEP350
ZMYM4
DGKH
PRC1
DTNBP1
DEK
UBE2R2
CTNNB1
SMIM22
ROGDI
SRF
CUL9
ZFYVE9
SMARCB1
UBALD1
MGRN1
PRKD3
RANBP17
RPL36
TLE4
UBE2J1
FGF18
RNF180
FAM135A
ZGLP1
FDX2
NXF1
FAM53C
CDC25C
NFIB
PRKACB
GOLGA6L10
AKAP13
MAP2
RAP1A
NPRL3
RPP21
RNF135
MYL6B
MYL6
FANK1
SELENOH
VARS2
GTF2H4
BTBD18
RALB
N4BP3
H2BC6
STUM
MOCS2
DIS3L
LRCH2
SH3GLB1
MNX1
ARSB
RNASE10
TMEM121B
DDX17
RNF187
NUCKS1
STON2
POLR2D
GTDC1
RHOBTB1
RNF217
ZBTB2
RP9
TLK1
NLRX1
DRAP1
C11orf68
NPM3
FGF8
CSRNP2
DEGS1
HNRNPA2B1
CBX3
NADK
VDAC3
RASL10B
TNFRSF13C
MLXIP
SLC22A23
TUBB2A
TLCD3A
ZMYND11
STOML1
PML
HNRNPAB
TRIB3
SP2
HIVEP1
PNPLA7
MRPL41
MAPKAP1
EIF2D
TTC5
HSPG2
RNF38
THAP12
GVQW3
ATP1B1
MRPS24
SRPRB
MTMR3
PHLDB2
HAGHL
CCDC78
ANTKMT
TIGD1