ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5441331 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX5441330: HeLa

◣ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ CPSF3: STRING

RABL2B
ZNF335
RABL2A
TSN
SRD5A1
MAPKAPK5
DYNC1LI2
NVL
CACTIN
NUP85
ICE1
PSMD12
MRPS7
MIF4GD
GGA3
POLR3F
DZANK1
S1PR4
NCLN
VDAC2
GOSR2
REXO1
OAZ3
MRPL9
C19orf48
HSPA9
NNAT
BLCAP
NME6
IPO13
POLR2E
GPX4
SUCLG1
UBE2I
TAOK3
SUDS3
CAPRIN1
EXOSC5
BCKDHA
SLC35B1
FAM187A
EFTUD2
CCDC103
RWDD1
ZNF576
IRGQ
MRPS5
ACTR10
RBBP5
COX7A2L
DCTN1
VTI1B
PSMD1
CDC73
PES1
SEC61B
ALG2
COMMD1
CCT4
SART3
ISCU
UPF2
HADHB
HADHA
LYRM4
FARS2
RABGGTB
TSNAX
PSMG2
CEP76
FARSB
NDUFA4
PDAP1
BUD31
STAM
PI4KB
MTRNR2L8
SUPV3L1
NUP205
MTRNR2L1
STAM2
SKP1
PNO1
RPL21
USP1
ZRANB2
IER3
FLOT1
PAK1IP1
C6orf52
ATP5MG
GOLGA5
PHF23
GABARAP
DVL2
SELENOF
HS2ST1
VARS1
GADD45GIP1
VPS52
RPS18
B3GALT4
HSPA1B
MYC
PTGES2
RPL26
KRBA2
TAF9
RAD17
AK6
ANAPC7
ZWILCH
SNAPC5
RPL4
RPS27A
CLHC1
PDHX
APIP
AXDND1
NFKBIL1
DDX39B
ATP6V1G2
EIF2S3
SMC2
SFI1
EIF4ENIF1
MRTO4
EMC1
TTC8
PIN4
ZC3H10
RPL41
ESYT1
TM9SF1
IPO4
TSSK4
TMED1
RPL35A
LMLN
IQCG
ZBTB37
RPS11
RPL13A
C6orf226
RPS23
ATP6AP1L
SLC3A2
WDR74
TM4SF1
ATP5F1E
PRELID3B
VPS28
ADK
AP3M1
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
PCBP1
DPH6
RPL27A
MAT2A
SF3B3
COG4
H2BC4
H2AC6
OR6B2
NDUFA10
SCRIB
RXYLT1
ATP6V0C
AMDHD2
BICRA
SUMF2
RBKS
BABAM2
NRAS
SYCE2
TRIM65
MRPL38
H4C12
H4C11
H2BC15
H2AC15
EIF4A2
RPS12
RPL22L1
H2BC14
H2AC14
PTPN6
C12orf57
ATN1
GLRX2
UFM1
DENR
XPNPEP3
ST13
DNAJB7
DGKZ
RPL17-C18orf32
RPL17
C18orf32
PEAK3
OAZ1
FAM104A
C17orf80
C6orf47
BAG6
APOM
PACSIN3
ARFGAP2
MED1
CDK12
SHC1
PYGO2
PBXIP1
LOC101928120
EDC4
MPDU1
LOC100996842
EIF4A1
CD68
DDIT4
RPS5
RNF225
HDGF
MRPL24
PAF1
GORAB
MTRNR2L2
MSH3
DHFR
P4HB
ARHGDIA
RPN1
PROSER1
NHLRC3
SYNRG
PCBD2
ANKLE2
ALKBH5
H4C3
H1-6
DUX4
PTMA
RPL37
H1-2
H3C3
UBE2M
CHMP2A
GTF3C4
DDX31
MRPS16
DNAJC9
GET4
H2BC21
H2AC21
H2AC20
RPS2
RPL3L
RNF151
NDUFB10
RNASEK
C17orf49
BCL6B
FADD
EXOSC6
PRKAG1
ABTB1
WDR46
RGL2
PFDN6
H2BC5
H1-4
MSH5
MPIG6B
LY6G6C
DDAH2
CLIC1
LAMP1
SIRT7
PCYT2
MAFG
PRDX2
JUNB
RPS29
LRR1
INPP5E
SRSF11
LRRC40
RPL12
LRSAM1
ZNF34
RPL8
MRPL2
KLC4
CUL7
TBCK
AIMP1
RPL3
CIRBP
NFE2
HNRNPA1
CBX5
CMTR1
RPL7
RDH10
VPS9D1
NDST2
POLG2
DDX5
SYNGAP1
PHF1
CUTA
STK36
RNF25
FAM131A
ZCWPW1
PPP1R35
MEPCE
EPN1
PRRT2
MAZ
PAGR1
MVP
CISD3
BNIP3
CNPY2
TUBB
MDC1
RPL10
DNASE1L1
NRIP1
RHBDL1
RIT1
RHOT2
RGS14
LMAN2
VARS2
GTF2H4
SPHK2
SPACA4
RPL18
FAM83E
RPS10-NUDT3
RPS10
MRI1
C19orf53
ID3
PRKRIP1
SURF6
TRAP1
ZBTB45
SLC27A5
PFDN5
MYG1
ZNF581
ZNF580
CCDC106
NAPRT
MROH6
TSC22D1
ZNF585B
ZNF383
TTC33
TTYH2
RPL38
RAD23A
CALR
BTBD10
GPAA1
EXOSC4
SLC25A11
RNF167
PFN1
ENO3
MRPS18B
ATAT1
MSH4
RRP36
MEA1
KLHDC3
TIMM13
CCDC34
TMEM79
SMG5
POLDIP3
SGK1
SEC11C
H2AZ1
DNAJB14
SGSM3
WDR90
FOXD3
RPL19
CACNB1
AGAP11
ADIRF
LOC105372440
ACP4
FLYWCH1
SLC39A13
HOXA3
HMCES
RACK1
RICTOR
HOXA6
HOXA5
MOV10
RPLP0
GCN1
RPL6
ARHGAP11A-SCG5
ARHGAP11A
EEF1A1
PIP4P1
OSGEP
APEX1
MMP24OS
MMP24-AS1-EDEM2
C19orf71
MRM1
DHRS11
TMPPE
GLB1
RPL13
CPNE7
RCOR3
CD320
CLUAP1
C16orf90
ID1
SECISBP2
CKS2
SPCS1
GLT8D1
ECI1
SMIM22
ROGDI
POLD1
NR1H2
HES7
ALOXE3
SF3A3
FUT11
CHCHD1
DPH7
POLR2J3
TMSB10
VIM
LRRC37A3
ARF3
VWA7
CENPBD1
PPARA
ATXN2
TSEN54
LLGL2
CASKIN2
H4-16
H2AJ
NAA10
ARHGAP4
LRRC24
C8orf82
RECQL4
LRRC14
ELP5
CTDNEP1
STYXL1
SLC25A10
MRPL12
ACTB
NOP53
FTH1
H4C8
BEST1
MRPL34
DDA1
ABHD8
TUBGCP6
HDAC10
WDR24
STUB1
JMJD8
GGA2
MOGS
MRPL53
CD79A
JMJD7-PLA2G4B
JMJD7
GP1BA
TSKU
ZMIZ2
CELF1
TRIP4
PCLAF
STRIP1
TXNRD2
COMT
RHOB
HCN2
PSMD5
NAT10
FAM174C
SCAMP3
FAM189B
CCAR2
C8orf58
GNG14
DHPS
GTF2IRD2B
GPS2
EIF5A
POMZP3
CYBA
TBC1D13
SLC26A11
SGSH
DBP
NDUFAF3
DALRD3
NDUFS3
KBTBD4
FAM180B
TRIP6
SRRT
BAZ2A
ATP5F1B
NUF2
H4C13
H3C11
H2AC16
H1-5
WDR6
NDUFS7
ARHGEF1
LDHC
ABHD17A
PUF60
COMMD2
TMEM107
PNMA1
MAP2K2
CARD6
MRPL40
HIRA
H3C13
H2BC18
CDK11A
ADPRHL1
SLC39A7
RXRB
RING1
HSD17B8
CRELD1
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
NOP14
GRK4
SIGMAR1
ARID3C
TSPAN10
NPLOC4
TOB1
SIX5
DMPK
NECAB3
ACTL10
H4C9
H2BC11
H2AC11
DRAP1
C11orf68
NOTCH2NLA
LRP6
TFAP2A
XRN1
PDCD6
ERCC1
CS
ABCB6
IDH3B
DPY19L4
TUBA1B
TCHP
NUDT1
MRM2
MAD1L1
NPAS4
NDUFA4L2
SHMT2
LIFR
WDR70
NUP155
MAPK8IP3
TMEM43
CHCHD4
PAIP1
SELENOH
POLR2J
ARHGAP12
ZNF446
ZNF324
GNG3
BSCL2
ISG20
ASB13
GRAMD2A
ZNF653
SCAP
C5orf24
AURKAIP1
ERGIC2
ZNF341
RCE1
GPN2
LBR
TATDN3
NSL1
H2BC12
H2AC12
RNF166
CTU2
FLOT2
DHRS13
SDE2
CHD2
CBX4
PRDM10
C7orf26
TMEM250
ZNF770
TAOK2
PMF1-BGLAP
PMF1
GAPDH
AKAP8
TRIP13
BRD9
THOC5
STOML2
PIGO
ZFP36
PLEKHG2
NXF1
HNRNPU
NCBP3
DNAJB12
SDHA
CCDC127
CSNK1G1
GFAP
ABCF1
NFAT5
TMEM267
FBXW9
VPS50
HEPACAM2
KIF2C
CTDSP1
MRPS34
EME2
NME3
SPSB3
TRAPPC9
SCAMP5
DIDO1
ERCC6L2
EAPP
SSBP1
SRF
CUL9
PPIB
SNX22
WDR47
ECHS1
H4C5
H3C4
H2BC7
H2AC7
SMN2
SMN1
MATR3
TMEM39B
SLC16A3
SHTN1
TAF12
C16orf46
POLR2C
MAMDC2
CHD8
EHMT1
BCAP29
PACS1
PCBP2
CCDC138
SLC39A1
CRTC2
CREB3L4
RAB5B
PMEL
CDK2
GRB2
COX20
ASXL1
RUVBL1
EEFSEC
ZDHHC23
NELFA
URM1
SETD1A
ORAI3
PURA
MARCHF6
ANKFY1
SPATA25
NEURL2
CTSA
SMDT1
PHETA2
NAGA
GSTA4
CCDC43
ZSWIM1
CTNNB1
MTF2
TOMM20
MYO18A
LPCAT1
CCDC86
DSTYK
ZNF511
TUBGCP2
HPS6
ARMH3
TMSB4X
GADD45B
IREB2
TRMT2A
RANBP1
TUBA1C
MEMO1
GBA
GAA
TXN2
MTIF2
OTUD7B
SPATC1L
TMED9
B4GALT7
TYSND1
ROPN1L
GTPBP6
PTCD1
CPSF4
TMEM262
RAB3IL1
NOTCH2
MDM4
RAC3
DCXR
FHL3
SLC15A4
CDC5L
PHF2
TCF3
AHRR
ATG4D
SMIM29
HMGA1
RMI1
HNRNPK
TOM1
HAGHL
CCDC78
ANTKMT
THEM4
METRN
DRG2
NOP2
TOMM6
PRICKLE4
FRS3
EIF3F
PDCL3
NPR1
ILF2
CYB561D1
ATXN7L2
NOLC1
RAD9A
PPP1CA
NME4
DECR2
EXOC3
MRPS23
TLCD1
RPL23A
RAB34
NEK8
EIF2D
HYAL1
SEMA4A
NAA80
IFRD2
HYAL3
GPANK1
CSNK2B
CHD1L
NDUFB2
PRKAB2
SKA3
MRPL57
TRAF7
RAB26
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
NT5C
TRAF4
KRT18
CYRIB
PPIA
UBE2H
SLURP1
RPS28
NDUFA7
FBF1
ICMT
HES3
KLHL12
RPP40
TAS1R1
NOL9
BRIX1
TAF2
ADM
ZC3H12A
BHLHE40
NSFL1C
PPP1R1B
TRIM37
BSPRY
NEUROD2
SLC29A1
MYMX
OSMR
CLCN7
LRRC59
ZNF286A
TGOLN2
TNFRSF12A
THOC6
HCFC1R1
CLDN6
ZNF358
MCOLN1
CALM1
GSTO2
TSFM
TMEM139
CASP2
RNPS1
JOSD2
ASPDH
VEZF1
SNAP47
JMJD4
ZNF76
KLHL15
AFF4
CLPTM1L
SLC39A4
CPSF1
ZNF583
CYB561
HASPIN
CSRNP2
DCP1A
RDH5
CD63
GPX1
SSX2IP
ANKRD13C
SCNN1A
LTBR
TDP2
ACOT13
SFXN4
SYT7
GABPB2
RSAD1
CHAD
AKAP1
RPLP1
RBL1
STX5
MAN2C1
UPF3A
SLC50A1
EFNA1
RIPK1
DPM3
SLC45A4
PABPN1
PDPK1
CEMP1
CCDC130
MADD
AGL
WDR11
EPHB4
RPSA
RPL27
IFI35
SNTB2
AGO3
ROM1
EML3
B3GAT3
RABIF
AMZ2
FKBP5
SUGCT
MPLKIP
FAM162A
CCDC58
TMEM170A
CFD
RPS26
NOC3L
TMEM223
TMEM179B
GADD45A
BAX
KDM6B
CIAO3
CLDN15
PRSS8
FIS1
RGS20
ATP6V1H
USP21
UFC1
PPOX
CXorf38
NOTCH2NLC
RELA
ATAD2
NR4A1
WASHC2A
TRIOBP
EIF4H
H3C6
NAA60
H2BC8
H2AC8
MBTPS2
ENDOV
DNAJC25-GNG10
DNAJC25
ENOSF1
LARP1
FAM156B
FAM156A
H3C8
H2BC10
HNRNPA1L2
IRF9
HMGB1
ZNF296
GEMIN7
GNE
YAP1
USPL1
TMEM249
SLC52A2
FBXL6
DAGLA
SH3GL1
CHAF1A
BRWD1
SLC35B2
HSP90AB1
TIPIN
TRIM47
ERBB3
FOSL1
FIBP
CCDC85B
KAT6A
RASA4B