ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089498 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◣ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

PSMD6
BCAS3
HEATR6
NPAS4
TRIM37
HTR5A
PFDN4
DYNLRB2
TUBD1
RPS6KB1
BRIP1
TEX14
RAD51C
KPNA2
SLC12A9
ARFGEF2
CA4
APPBP2
TTC24
IQGAP3
USP32
FAM72C
FAM72A
BMP7
POLR2J3
RNFT1
FBXO32
RFC3
SIKE1
SKA3
MRPL57
TSR3
GNPTG
FAM72D
SCRT1
DGAT1
FAM72B
BARHL1
ALKBH2
UNG
NCAPH
ITPRIPL1
BCAS4
DCLRE1B
AP4B1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
HIPK1
FANCD2
C12orf66
PPM1D
NCOA3
MAD1L1
NUDT1
MRM2
DZIP3
CIP2A
TRIP13
BRD9
IQSEC3
UTP20
DSCC1
OAZ3
ATXN7
PDE4DIP
SLC37A1
RSPH1
SGO1
PPM1E
RABL2A
CREBRF
XKR7
PARD6B
KCNJ14
GRWD1
ZNF217
KCNH6
BCAS1
SUMF1
L1CAM
RRP15
SMG8
POLQ
POLR3GL
LIX1L
ANKRD34A
C3orf14
NEIL3
RNF166
CTU2
CSTF1
AURKA
TMEM262
ZFPL1
CDCA5
C16orf46
ZNF331
CKAP2L
MAMDC2
XRCC2
DHX40
SAP30BP
RECQL5
ATXN1L
MTFR2
NOL8
CENPP
TTF2
CYB561D1
ATXN7L2
CCNB1
CPLX2
ESPL1
YPEL2
KIF14
CRBN
SMC2
UBE2C
SKA2
PRR11
BIRC5
RAD54B
FANCI
ZNF696
METTL1
EEF1AKMT3
CYP27B1
HSF1
BOP1
TROAP
CCDC86
INKA2
DDX20
WASHC5
NSMCE2
PRCP
DDIAS
WIPI1
RAB22A
RACGAP1
MCM7
AP4M1
ATG14
NTAQ1
NET1
TUBAL3
NOTCH2
COG7
UBE3D
DOP1A
DUX4
GFPT1
RRP12
SPATA25
CTSA
ZSWIM1
NEURL2
BUB1
TRIM33
NOL6
EDC3
CDC14B
CCT2
TTLL11
SMIM41
ATG101
GFOD2
HSDL1
DNAAF1
TTC27
CEP128
TRMT61A
CKB
RNF40
CCDC189
NAGPA
NUF2
MYBL2
INTS2
C8orf33
MFSD1
PGBD5
RMDN1
CPNE3
MCM10
EXO1
TTK
TMEM249
SLC52A2
FBXL6
FOXH1
PPP1R16A
MOK
ARL4D
ATP5F1E
PRELID3B
BICDL1
NEMP1
MAPK8IP2
TONSL
CCNA2
INSM2
GTF2H3
EIF2B1
METTL2A
MED20
BYSL
CENPBD1
PIGU
ZAR1L
BRCA2
TICRR
NHP2
AP4E1
ACOX3
NRAS
NUP107
TWNK
MRPL43
LZTS2
AP3B2
GTPBP4
TMOD3
DYNC2I1
NOMO3
ABCC6
RRM2
URB1
NME1
KIFC1
TOP1MT
RAD9A
PPP1CA
RABL2B
DNAH7
STOML1
PML
TBX2
MIS18A
LTV1
LRRC29
DHX37
BRI3BP
NDUFAF6
CCNE2
ABCA5
PWP2
LOC102724159
PHTF1
KLHDC4
RPP38
ACBD7
ZNF23
WDR4
QSOX2
FAM227B
DTWD1
SPEF2
TM9SF1
IPO4
RTF2
CEP55
RPP40
TUBB3
MC1R
CPSF1
SLC39A4
ZHX1-C8orf76
ZHX1
POLR2K
SPAG1
FBXO43
SMYD5
RAD18
EEF1E1
FRAT2
EIF2D
RHEBL1
KMT2D
NPM1
ZNF79
THOC7
VRK1
GTSE1
IARS1
NBPF15
SQLE
LRRC24
RECQL4
LRRC14
MFSD3
MYL12A
MYL12B
TCF19
POU5F1
CCHCR1
DEPDC1B
KIF20A
BRD8
SPTLC1
WDR43
ZFAND2A
MON2
HCFC2
GLT8D2
ATP6V1C1
GGH
ZMYND8
TASOR2
RTKN2
POC5
MRPS23
FAM207A
ZC3H18
TACO1
PSMD4
NKX1-1
NUB1
TOP1
OS9
MED6
DLGAP5
SARS1
ZFYVE1
SHCBP1
EIF3C
EIF3CL
ASPM
PRPF18
CENPB
CDC25B
RNF114
P2RY11
PPAN-P2RY11
PPAN
ANGPTL6
PCOTH
MIPEP
C1QTNF9B
PRMT6
NDUFV1
METTL3
NAA35
SNRPE
ERN1
CORO7-PAM16
CORO7
DNAJA3
C11orf49
FEZ2
BLM
MARS2
WDR47
PLK4
RRP1
CMC2
CENPN
AARS2
CCNG2
RAD51
HEATR5A
TTC26
TMEM186
PMM2
KLHL36
TCTN2
AMIGO1
FAM214A
CLTC
PLCG1
SPC25
ZHX3
MCRS1
ARMC2
ZBTB9
FBXO5
ZNF688
SMIM5
EIF2S1
ATP6V1D
PLEKHM3
DENND2C
METAP1D
AEN
PUF60
LOC101928764
FBXW8
AOPEP
BCAS2
IFT22
WDR59
PRR5L
COMMD9
DBNDD2
TBC1D30
GNS
RXYLT1
NIPSNAP3A
TMEM231
TDRKH
GABARAPL2
RFC1
AP5Z1
URM1
NEK11
ASTE1
PSMA5
ATP5MG
YWHAG
TBC1D13
CLBA1
AHNAK2
PLK1
HEXA
MTMR14
SLC35B1
ENTPD5
BBOF1
ATP6V0D1
AGRP
PARPBP
NUP37
CCT5
ATPSCKMT
CFAP69
IFT88
DDX11
NOMO1
CIT
EXOC3L1
E2F4
KIAA0895L
ROPN1L
ELMO3
KAT2B
PSMB7
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
BOLA2-SMG1P6
VAC14
PRMT2
FANCC
DUS4L-BCAP29
DUS4L
COG5
PRKAB1
MOCS3
DPM1
IPO11
DIMT1
SH3BGR
LCA5L
RMI2
C16orf71
ANKS3
CDC25A
PUS1
CFDP1
NPIPB15
EIF3E
VANGL1
SEC22A
AGFG2
RRM2B
ETFDH
C4orf46
ACTR6
CCDC150
DPY19L4
ANGEL1
MRPL27
EME1
ANAPC7
ZNF367
CHCHD3
VARS1
GALK1
SECISBP2
CKS2
WDR3
GDAP2
PTRHD1
CENPO
FAM240C
SGO2
TSEN2
FARSB
PIP4K2C
ATXN3
MARCHF10
HMGB1
SAXO2
EFL1
AXDND1
RNASEH1
SNAP25
XPO4
TRIAP1
COX6A1
NUDT4B
NUDT4
VPS13B
TPTE
RIPOR3
SPNS1
LAT
FIS1
CLDN15
GATB
DUS2
DPEP2NB
DDX28
CYB561
TMEM183A
C1orf54
APH1A
ZNF408
ARHGAP1
RPL7A
MED22
L2HGDH
DMAC2L
SURF2
SURF1
VPS50
HEPACAM2
TRMT1
NACC1
STAT1
ATG7
INIP
CORO1A
CENPA
CENPW
DYRK1B
TEDC2
GOLGA5
USP8
WDHD1
SOCS4
PHLPP2
GRB2
MELK
TRAPPC10
TMEM67
RABIF
STYXL1
MDH2
MBTPS1
AUH
WDR35
ZNF622
CSRNP2
HMGCS1
TTLL9
DUSP15
KLHL20
MED13
TUFT1
SENP5
HELZ
FBXW2
TSFM
ASF1B
RPS29
TPRA1
MDM4
MRPS21
WDR31
BSPRY
ATP1A1
LRR1
MND1
BBS1
SPRYD3
QTRT1
ATAD2
RBM28
RPIA
RGS14
LMAN2
EBAG9
CSDE1
TEX10
ZGPAT
ARFRP1
WASHC2A
KDM5B
PTPN1
ZNF789
ATP5MF-PTCD1
ATP5MF
CHD1L
PRKAB2
TAF13
CDK1
PSMC2
DNAJC2
HAT1
SCFD2
LTO1
METTL6
EAF1
METTL2B
RIOK3
FCF1
AREL1
TASP1
HASPIN
RIOK1
CAGE1
NUP35
MET
ATR
SLC25A26
FSD1L
NBPF1
SLC25A19
RNASEH2A
PRDX2
HEATR5B
GPATCH11
TMEM109
PRPF19
SPATA33
NGRN
RABEPK
RCN2
LRPPRC
PSMD12
USP54
CDIPT
RAE1
MTRNR2L3
STRIP1
COPS3
NXF1
GREB1
LSM14B
SAMD10
PRPF6
RBM48
PEX1
C12orf45
TEKT2
ADPRS
NARS2
INTS1
PRPF39
TTLL5
ERG28
VPS53
MXD4
GLE1
TBC1D31
RMDN3
GCHFR
ZGLP1
FDX2
RTEL1
POLR2J
STMN3
RHNO1
FOXM1
LPIN1
NTSR2
COMMD4
PDXDC1
MRPL3
KLF10
ADCK1
RPLP0
GCN1
PRKAR1A
RPL32
CLCC1
RSL1D1
OSTM1
TFF1
NOL11
CAMSAP2
REXO4
ADAMTS13
DYNC1I2
ZNF276
VPS9D1
RPL30
PEPD
CNPY3
RBSN
GOLGA3
NME2
MAPKAP1
PWP1
GTPBP10
IMP4
CCDC115
POLD3
ZNHIT1
PLOD3
TEX2
VPS45
CCDC90B
PREX1
MTRNR2L2
MSH3
DHFR
MARCHF8
SNRPD1
PDSS1
FAM13B
EXOC5
AP5M1
CLCN7
MYO5C
NANS
ZDHHC22
CRNKL1
CFAP61
ZSCAN2
THADA
GPR61
GNAI3
SPPL2A
SRD5A1
NSUN2
AMZ2
KCTD13
TAMM41
KLHL32
POLR2J2
NDUFAF4
DPH7
C14orf28
SLC22A5
SPATA2
MRPL11
TRMT44
SLC45A3
GSC2
RIF1
NEK10
ABTB1
C6orf89
SDAD1
TM2D3
CCDC146
SFSWAP
GPR89A
PYCR3
GFUS
TTLL4
REXO5
ERI2
MAPKAPK5
CUL2
PIMREG
AIPL1
MAPK8IP3
AP1M1
CHRNA5
TRIM14
DNAAF4
MTPN
LUZP6
NOP9
DHRS1
LTB4R2
SRPRB
PTPRCAP
ZC3H3
MFSD5
MACROD1
SETDB1
WIPI2
NFATC2IP
CORO1B
CABP4
GPR152
RAD54L
TADA2B
CCDC96
TCOF1
MLYCD
NOMO2
RPS16
SUPT5H
TMED9
B4GALT7
NUDT2
KIF24
FBXL13
ARMC10
POLL
DPCD
CCND3
PDPR
POLE3
C9orf43
ALAD
ADAT1
PNPLA8
WDR77
ATP5PB
CFAP206
PRIM2
UBXN11
FAM180B
NDUFS3
KBTBD4
SH3GLB2
CHFR
MIGA2
DYNLL2
PRMT3
MAD2L1
UTP23
PES1
CNTRL
C5
SNAPC4
TCP11L1
ESCO2
CCDC25
UBFD1
EARS2
HM13
TAF5
RGS20
ATP6V1H
INPP5K
MTMR11
SF3B4
SV2A
DNA2
KNOP1
DNAJC25-GNG10
DNAJC25
ARFGAP1
RNF115
POLR3C
SPG7
GOLGA7B
KIF18B
PUM3
LARP4
FAM186A
ECT2
ASNS
BRD3OS
ARL6IP1
KCNC1
TUT7
PTPRH
TF
TOPBP1
ANKRD46
GOSR2
ORAI2
SMARCD1
RUVBL1
CENPE
CDT1
APRT
RAB7A
GNG14
FBXW9
NAA25
IFT46
ARCN1
SF3B2
GAL3ST3
PIP4P2
ANKRD28
CYP51A1
INTS4
PALLD
NEK2
DDX19A
SLBP
TMEM129
TACC3
NGDN
WDR81
MMS22L
DNAJC30
BUD23
SAC3D1
ROM1
EML3
B3GAT3
TSC2
NTHL1
TRIP6
SRRT
VPS33A
SEC13
METTL18
C1orf112
RCE1
PSRC1
ZNF107
BUB1B
ZNF778
XRN2
DERL1
RANBP6
KIAA2026
MAN2B2
FANCA
P2RY2
PI4KB
KLHL18
KIF9
QTRT2
CCDC191
PPP1R12B
UBE2T
MMUT
CENPQ
SLC25A16
KXD1
UTP4
DERPC
CHTF8
GDPGP1
CIB1
PSMA7
PROSER1
NHLRC3
NOC4L
DDX51
PUS7
RINT1
WDR70
NUP155
ZEB1
SWI5
GOLGA2
LEO1
CACYBP
GPATCH4
NAXE
AURKB
NUFIP1
GPALPP1
MARS1
ARHGAP9
TBC1D23
UCHL5
RO60
PMPCB
GNA13
EMC8
COX4I1
CYP27C1
SAR1A
WDR46
RGL2
PFDN6
NOP16
HIGD2A
DDX42
CCDC47
TBC1D15
MYBL1
TATDN1
NDUFB9
NUDT15
GAR1
KIF11
DDX46
RAB5B
PMEL
CDK2
CREB3L2
HSPA5
FAM174A
C11orf24
CANX
HNRNPF
SH2B1
TUFM
PDIA5
UNC45B
NLE1
ECSIT
CNN1
KCTD5
MRPL21
IGHMBP2
NBN
PSMB4
CEBPB
INO80