ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089497 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◣ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

HEATR6
BCAS3
TEX14
RAD51C
TRIM37
PSMD6
NPAS4
HTR5A
PFDN4
SGO1
NCAPH
ITPRIPL1
CA4
SKA3
MRPL57
TTC24
IQGAP3
FAM72C
FAM72D
KPNA2
BRIP1
TUBD1
RPS6KB1
USP32
SLC12A9
FAM72B
IQSEC3
TROAP
FAM72A
ALKBH2
UNG
DYNLRB2
CCNA2
DLGAP5
TRIP13
BRD9
DZIP3
CIP2A
XRCC2
BMP7
CKAP2L
MAMDC2
ARFGEF2
METTL1
EEF1AKMT3
CYP27B1
TSFM
UBE2C
BARHL1
RAD54B
OAZ3
DUX4
BIRC5
TICRR
NEMP1
SMC2
FANCI
DCLRE1B
AP4B1
APPBP2
POLQ
SCRT1
DGAT1
MYBL2
UTP20
KIF14
FANCD2
RNFT1
NET1
TUBAL3
EDC3
SIKE1
PARD6B
VRK1
NOL8
CENPP
DHX40
RRP15
ATXN7
FBXO5
NEIL3
SMG8
NUF2
MCM10
SAP30BP
RECQL5
PRCP
DDIAS
C12orf66
ZNF688
EXO1
TTC27
MTFR2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TOP1MT
CEP128
RNF166
CTU2
HMGB1
SPATA25
CTSA
ZSWIM1
NEURL2
NCOA3
C8orf33
TONSL
ZNF331
KLHDC4
HSF1
BOP1
DSCC1
MIS18A
SNAP25
TMEM262
ZFPL1
CDCA5
RAD18
CCNB1
TRMT61A
CKB
POLR2J3
CSTF1
AURKA
SKA2
PRR11
CCT2
SUMF1
ZAR1L
BRCA2
C3orf14
WASHC5
NSMCE2
PPM1D
RTKN2
CYB561D1
ATXN7L2
TTK
BCAS4
CPLX2
CRBN
L1CAM
TEDC2
ZNF217
ELOVL1
CDC20
RFC3
WDR4
EIF2D
CCDC86
HIPK1
MED20
BYSL
FBXO32
MAD2L1
C1orf54
APH1A
TTF2
DUS2
DPEP2NB
DDX28
PKMYT1
MOCS3
DPM1
POLR3GL
LIX1L
ANKRD34A
FANCC
SHCBP1
XKR7
NKX1-1
RACGAP1
ZHX3
MOK
RHEBL1
KMT2D
VARS1
PDE4DIP
TSEN2
PHTF1
STOML1
PML
SPC25
VPS50
HEPACAM2
RAB22A
TCF19
POU5F1
CCHCR1
PWP2
LOC102724159
SGO2
DEPDC1B
TCTN2
NTAQ1
SPTLC1
MND1
TOP1
NAGPA
AURKB
BCAS1
FOXH1
ZNF778
PPP1R16A
ATP1A1
ACOX3
TBX2
CYB561
ZNF696
BUB1B
NAA25
BLM
ESCO2
CCDC25
TM9SF1
IPO4
DYNC2I1
KLF10
THAP10
LRRC49
INKA2
DDX20
NDUFAF6
CCNE2
METTL3
ARL4D
RABL2B
TSR3
GNPTG
MRPS23
ZFYVE1
TAF13
RBM19
CMC2
CENPN
CLTC
NUP107
AP4E1
MKI67
ZSCAN2
CORO7-PAM16
CORO7
DNAJA3
DYRK1B
SKA1
P2RY11
PPAN-P2RY11
PPAN
ANGPTL6
CCDC146
GGH
CREBRF
ZC3H18
ATXN1L
NOTCH2
RTF2
DHX37
BRI3BP
LTV1
PLK4
RUVBL1
RNF40
CCDC189
RPP40
NRAS
CENPW
PLK1
ATP6V1C1
RAD54L
GTSE1
LSG1
SLC25A19
UBE2Q1
CHRNB2
NOL6
C16orf46
EEF1E1
TBC1D30
GNS
RMDN1
CPNE3
THOC7
ESPL1
MTMR14
QSOX2
ANAPC7
PPM1E
SMYD5
RHNO1
FOXM1
PGBD5
MAD1L1
NUDT1
MRM2
EIF3C
EIF3CL
FAM227B
DTWD1
NDUFV1
SEC22A
SCFD2
KIFC1
RRP1
SLC25A26
FKBP3
FANCM
ERN1
AMIGO1
HRH3
MXD4
AP3B2
SHC1
FLAD1
CKS1B
ASPM
ASNS
GTF2H3
EIF2B1
UBE3D
DOP1A
MLYCD
KCNH6
SUPT4H1
NEK11
ASTE1
LOC101928764
HSDL1
DNAAF1
TACO1
SPEF2
YPEL2
ATP5F1E
PRELID3B
MYBL1
MTPN
LUZP6
PYCR3
GFUS
NBN
AGFG2
DDX49
COPE
COG7
CCT5
ATPSCKMT
MRPL11
E2F8
KIF18B
COMMD4
TTLL11
REXO4
ADAMTS13
CLCC1
RAB41
PDZD11
KIF4A
PIP4K2C
NEK2
NGDN
PLCG1
TASOR2
TEDC1
CRIP1
GOLGA3
BCAS2
RRM2
TRIM33
SMIM5
CDT1
APRT
RAD51
GABPB1
VAC14
SPNS1
LAT
NBPF15
DUS4L-BCAP29
DUS4L
COG5
BICDL1
ZBTB9
CDK1
RABL2A
FAM214A
DDX11
WDR74
STX5
RPL30
DARS2
CENPL
PRKAB1
HAUS7
KIF20A
BRD8
ATAD2
TPRA1
CIT
ZGLP1
FDX2
ZNF23
SUV39H1
KAT2B
HCFC2
GLT8D2
INTS1
DSTYK
SLC37A1
RSPH1
GPATCH4
NAXE
SNRPE
NAA35
PREX1
PIGU
PALB2
DCTN5
TEX2
UTP23
NME1
RGS14
LMAN2
SFSWAP
PRMT6
PIMREG
AIPL1
RABIF
OSGIN2
SDAD1
PTPN1
ZMYND8
SRPRB
TMEM231
PTRHD1
CENPO
GABARAPL2
PHLPP2
TMEM186
PMM2
TASP1
METTL6
EAF1
C16orf71
ANKS3
HEATR1
NOL11
NOM1
RAD51AP1
C12orf4
CHUK
ZNF367
MDM4
CCDC150
EXOSC5
BCKDHA
SEL1L
ZNF726
BUB1
NOMO1
COQ2
MFSD5
CEP55
TWNK
MRPL43
LZTS2
RTEL1
CENPE
STMN3
METTL2A
SLC35B1
NDUFAB1
METTL2B
ASF1B
NUDT4B
NUDT4
ARSG
HASPIN
SLC16A6
RFX5
MCM7
AP4M1
TTLL9
DUSP15
WWP2
NOB1
PKD1L3
DHODH
ZBTB49
LYAR
ARRDC4
MTRNR2L2
MSH3
DHFR
PDXDC1
TMEM249
SLC52A2
FBXL6
ADCK1
ATG14
TPRN
TMEM203
NDOR1
URM1
MCM3
GPR89A
TMEM258
FEN1
PIP4P2
TRPM7
EIF2S1
ATP6V1D
AARS2
ARFGAP1
TPTE
AEN
RABEPK
PKIG
SERINC3
SAAL1
POLR1B
IARS1
CDK5RAP2
KCNJ14
GRWD1
TIMELESS
MIP
HM13
INTS2
GPR146
OLA1
RNASEH1
OXR1
SLC25A44
TUBB3
MC1R
LRPPRC
RAB35
CPSF1
SLC39A4
PSMB7
PTPRCAP
DERL1
EIF3E
CORO1B
CABP4
GPR152
GTPBP10
KNL1
MRPL3
FANK1
MRPL27
EME1
SMIM41
ATG101
TSEN54
LLGL2
PPP1R12B
UBE2T
CASKIN2
OS9
CDC14B
AOPEP
TCOF1
ORAI2
ARMC2
MFSD1
GTPBP4
RXYLT1
HSPA5
PABPC1
RTBDN
MAST1
PRPF18
SLF2
ZNF276
VPS9D1
KIAA1586
SELENOS
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
MAPK8IP2
CORO1A
RNF114
PRIM2
LAMTOR1
ANAPC15
ZC3H3
RSL1D1
POLR2K
SPAG1
TP53INP1
RPUSD1
CHTF18
DENND2C
PPP2R5C
DNA2
DYNC1I2
GOLGA5
RRP12
LRRC29
ECT2
STIL
STX16
PDSS1
SARS1
TF
TOPBP1
TRAIP
MRPL1
CEP135
YEATS4
RBM28
PES1
C20orf27
NEUROD4
POLR2J
SEC13
USP14
ITGB4
ANKRD46
LRRC24
RECQL4
LRRC14
MFSD3
SYT5
ABCA5
EDC4
ARHGEF5
CDC25A
TMOD3
MTMR11
PDE8A
SF3B4
SETDB1
SV2A
URB1
NUDT2
KIF24
PARPBP
NUP37
WDR3
GDAP2
FRAT1
RIPK2
DPH7
RPS26
PI4KB
KLF1
GCDH
DNASE2
SLBP
TMEM129
TACC3
CENPH
RPF2
RIDA
POP1
SMAGP
THOC3
SPATA2
CCNB1IP1
CHFR
C14orf28
ADAT1
CNTRL
RPL32
C5
GCSH
CLCN7
ZNF695
MRPS35
RNF115
POLR3C
SLC27A2
CNPY3
ERGIC1
HSPA12A
ENO4
CENPB
CDC25B
TAMM41
MED13
TMA16
WDR20
HSP90AA1
STK3
UMPS
EEF2K
KMT5A
CSRNP2
PNPT1
SPATA33
RCE1
TTC26
LTN1
PUS1
ASB8
MAF1
CYC1
RPLP0
GCN1
FIS1
ANAPC5
CLDN15
ZHX1-C8orf76
ZHX1
HELZ
CCNG2
QTRT2
CCDC191
C7orf50
BOLA2-SMG1P6
CCDC200
SSBP1
ZC3HC1
PRMT2
TTLL5
ERG28
XPO4
SLC22A15
INSM2
CENPF
CGGBP1
METTL25
CCDC59
NDUFB2
C3orf38
STAT1
FAM24A
KLHL32
RMI2
NDUFAF4
CDIPT
DDX5
CEP95
POLG2
RRM2B
ANGEL1
AXDND1
GFM1
NARS2
POLE3
C9orf43
ALAD
POLE2
KLHDC1
PBK
VPS33A
WDR46
RGL2
PFDN6
FBXO43
LIN9
RFC1
CCDC90B
ZNF706
CNPY2
NOP16
HIGD2A
GPR89B
GTF3C5
ENTPD5
BBOF1
FBXW2
ING4
FAM91A1
RIF1
QTRT1
ARHGAP11A-SCG5
ARHGAP11A
GNPNAT1
MYO5C
FPGS
SAXO2
EFL1
PLEKHM3
RAE1
MTRNR2L3
IKBIP
APAF1
NIPSNAP3A
WIPI1
LSM5
AVL9
MMUT
CENPQ
PFDN5
MYG1
NSUN5
VANGL1
XPOT
PXMP2
POLE
PCMTD2
ZNF79
PHB
NUFIP1
GPALPP1
TADA3
ARPC4-TTLL3
ARPC4
COPB2
C6orf89
C12orf45
ZWILCH
SNAPC5
RPL4
DDX19A
CHPF2
ABCF2-H2BE1
ABCF2
BZW2
GOLIM4
ANKMY2
MAPKAPK5
DLD
ACTR6
PIP4P1
OSGEP
APEX1
GINS1
HAGH
FAHD1
MYL12A
MYL12B
MXD1
CCDC34
PDCD2L
VTA1
NMBR
TBC1D15
SKIV2L
NELFE
PRKAR1A
NME2
ZNF888
CARMIL3
SECISBP2
CKS2
TATDN1
NDUFB9
C16orf89
ALG1
GDI2
RUNDC3B
GNG14
FBXW9
FLCN
METAP1D
ATP6V0D1
AGRP
DNAAF4
VMP1
PTRH2
AZIN1
PCOTH
MIPEP
C1QTNF9B
RNASEH2A
PRDX2
STYXL1
MDH2
DMXL2
P2RY2
ZNF789
ATP5MF-PTCD1
ATP5MF
SPPL2A
RBM8A
PEX11B
NUP205
SPRYD3
TMEM192
KIAA0895
ANLN
PRR5L
COMMD9
PMS2
AIMP2
NOXO1
TBL3
RPS2
RNF151
SMC6
GEN1
DCK
MRPL28
NOC4L
DDX51
RHBDD2
SGTB
NLN
NBPF1
CCNB2
NHP2
ODF2
ENDOV
DEPDC1
CFDP1
RPL8
ZNF622
DBR1
ZNF517
RIN1
BRMS1
B4GAT1
PPIL1
NPIPB15
TMEM109
PRPF19
NGRN
ING3
THUMPD3
SLC31A1
FKBP15
CALB1
WDR61
POLR2J2
IMP4
CCDC115
FCF1
AREL1
MTHFD1L
MBTPS1
PEBP1
AUH
SPDL1
GCH1
PTPRH
ATG7
MAX
HACL1
BTD
SMARCC1
SLC7A6OS
PRMT7
MED10
UQCRB
FBXW8
TRIAP1
COX6A1
MRPS21
NCKAP5L
RAC3
DCXR
FAHD2A
PAM16
EMC2
ATXN3
GPR135
WASHC2A
IPO11
DIMT1
ZNF358
MCOLN1
NOL10
PIF1
CMSS1
NOMO2
CLBA1
ZNHIT1
PLOD3
AHNAK2
SARNP
ORMDL2
TMEM121B
GLE1
CREB3L2
ATP5MG
MAPK8IP3
WDR93
PEX11A
SLC26A9
GTF3C4
DDX31
WDR35
FANCA
ADAM17
VKORC1
PRSS53
FARSB
MCCC1
DLST
POC5
DBNL
NUDCD1
SPICE1
RCCD1
PRC1
KRR1
MSTO1
GSTP1
CEP72
KRT3
SHQ1
CENPA