ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089504 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◣ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

MAMDC2
DUX4
PSMD6
BCAS3
HEATR6
BRIP1
NPAS4
TRIM37
ARFGEF2
PARD6B
APPBP2
TUBD1
RPS6KB1
DYNLRB2
ALKBH2
UNG
PFDN4
NCOA3
FBXO32
SMG8
TTC24
IQGAP3
SLC12A9
USP32
HTR5A
NAGPA
SCRT1
DGAT1
BCAS4
ARL4D
ZNF217
FBXO5
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ZNF331
TM9SF1
IPO4
TRIP13
BRD9
LOC101928764
ZFYVE1
PPM1D
MTFR2
TEX14
RAD51C
C3orf14
DCLRE1B
AP4B1
KLHDC4
CCT2
MUC3A
ATG14
MCM7
AP4M1
NOTCH2
TROAP
HSF1
BOP1
C12orf66
FANCI
CRBN
XKR7
BIRC5
SKA3
MRPL57
RAD54B
FAM72B
SFSWAP
CREBRF
DZIP3
CIP2A
FAM72C
FAM72D
FOXH1
PPP1R16A
KPNA2
TSR3
GNPTG
TRMT61A
CKB
OAZ3
TMEM262
ZFPL1
CDCA5
TTF2
FAM72A
SGO1
MOK
TTK
CA4
CCDC200
HCFC2
GLT8D2
BARHL1
RBM48
PEX1
POLR2J3
UTP20
FANCD2
TACO1
NTAQ1
LTV1
EIF2D
TRIM33
GTF2H3
EIF2B1
IQSEC3
DHX40
UBE2C
SIKE1
TMOD3
VPS50
HEPACAM2
FAM214A
CCDC86
MAPK8IP2
TICRR
POLQ
ATXN7
THOC7
MIS18A
RFC3
XRCC2
DLGAP5
C8orf33
MCM10
ART1
NCAPH
ITPRIPL1
HIPK1
WASHC5
NSMCE2
URB1
DHX37
BRI3BP
RRM2
PTRHD1
CENPO
PGBD5
LRRC29
TTLL11
MAD1L1
NUDT1
MRM2
RNF166
CTU2
TSEN2
BLM
TBX2
RAD18
MOCS3
DPM1
SLC37A1
RSPH1
METTL3
SUMF1
KIF14
ZC3H18
RACGAP1
TMEM150A
RNF181
NAA25
USP39
C2orf68
ENTPD5
BBOF1
TONSL
METTL2B
CPLX2
BMP7
ATP6V1C1
PHTF1
FAM227B
DTWD1
RAE1
MTRNR2L3
METTL1
EEF1AKMT3
CYP27B1
RNF40
CCDC189
SAP30BP
RECQL5
DNAH7
RMDN1
CPNE3
RRP12
CCT5
ATPSCKMT
SMYD5
CEP128
BUB1
MYL12A
MYL12B
ANGEL1
C16orf46
RBM19
VRK1
NGDN
ZEB1
ZAR1L
BRCA2
RAB22A
MED20
BYSL
YPEL2
MND1
RTKN2
NEIL3
GFPT1
RBM28
PIP4P2
P2RY11
PPAN-P2RY11
PPAN
ANGPTL6
KLHL36
EXO1
TMEM186
PMM2
POLR2J
SLC45A3
TRMT61B
RABIF
LYSMD2
TMOD2
PDXDC1
SRPRB
TTLL5
ERG28
NME1
TRPM7
VARS1
NHP2
METTL2A
MTMR14
TBC1D13
NBPF15
EIF3C
EIF3CL
SPPL2A
MED13
PDE4DIP
RNFT1
CYB561D1
AEN
POLR3GL
LIX1L
ANKRD34A
TCTN2
CCNB1
LRRC24
RECQL4
LRRC14
MFSD3
POC5
CENPA
CDT1
APRT
MRPS23
TOP1MT
TBRG4
NKX1-1
AXDND1
MAF1
CYC1
BICDL1
VGLL4
ZNF696
PTPN1
NGRN
BZW2
ANKMY2
SRD5A1
NSUN2
GNPNAT1
CDK1
DBNDD2
TMEM251
MOAP1
SPATA25
CTSA
ZSWIM1
NEURL2
ATAD2
MLYCD
CAPZA2
AZIN1
CHID1
C16orf71
ANKS3
GTPBP10
MRPL11
METTL6
EAF1
CUL2
L1CAM
CNPY3
CCNA2
TASOR2
SLC35B1
RPL7A
MED22
SURF2
SURF1
OSTM1
TRIM48
NET1
TUBAL3
INKA2
DDX20
IFT88
NEK2
PTPRN2
PPM1E
NOMO3
ABCC6
SARS1
SLC25A13
KIF18B
INSM2
LRPPRC
WDR35
MCRS1
STX7
CAMSAP2
WDR43
SAXO2
EFL1
CDK4
MARCHF9
TSPAN31
AGAP2
EAPP
RRP15
BUB1B
CCDC146
NOP16
HIGD2A
PLK1
SLC25A24
GINS2
SMC2
C6orf89
VPS13B
LMTK2
NOM1
COPS3
NAA20
UTP23
MKI67
ACOX3
ZNF778
GABPB1
RFC2
SPG7
DLST
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
CORO1A
MON2
ABTB1
TTC27
CKAP2L
NDUFAF6
CCNE2
NDUFV1
ATP1A1
TBK1
MBTPS1
XPO4
TADA2B
CCDC96
RIPK2
ATL2
TSR2
NOL6
SNX16
THBS3
MTX1
NOL8
CENPP
KIFC1
UFD1
CDC45
EEF1E1
PES1
AOPEP
IDH3A
VANGL1
FBXO33
SKA2
PRR11
SMIM41
POLR2K
ATG101
DYRK1B
FBXO43
FRG2C
NDUFAB1
ZNF212
AURKB
HSDL1
DNAAF1
POLR1B
DDX42
CCDC47
NOL10
KCNH6
TMEM183A
AGFG2
ZNF367
FRAT1
NBPF1
KNOP1
ZNF79
INTS2
ZFP41
PIGH
MET
DDX49
COPE
LSG1
CFAP69
RRP1B
HSF2BP
MTPN
LUZP6
TEX2
GPSM2
NEMP1
ZNF688
RNASEH1
FKBP3
FANCM
INTS1
CFDP1
WDR4
ESCO2
CCDC25
EXOC3L1
E2F4
KIAA0895L
ELMO3
TSFM
SPTLC1
UMPS
TPTE
RPS23
ATP6AP1L
TRMT1
NACC1
RPP40
MFSD1
NRAS
TBC1D30
RBM8A
PEX11B
KPNA1
LSM8
CPLX1
RAD51
RUVBL1
RNF114
TRMT44
MFSD5
CALM1
SIK1B
SIK1
TMEM18
HAUS5
SPNS1
LAT
DUS4L-BCAP29
DUS4L
COG5
KLF10
CPSF1
SLC39A4
PSMD12
SND1
PIAS3
GTSE1
AP4E1
SH3BGR
LCA5L
TMEM249
SLC52A2
FBXL6
FRG2
SEC13
GPR89B
THAP5
DNAJB9
C11orf24
TECPR1
C14orf28
HELLS
SPAG9
PDIA4
CKAP5
CENPW
EIF3B
WASHC2A
ZGLP1
FDX2
RXYLT1
EBAG9
ZC3H3
GDPGP1
CIB1
SCRIB
GPATCH4
NAXE
DUS2
DPEP2NB
DDX28
ZBTB9
TEDC2
TMEM231
DYNC1I2
SPEF2
GLRX5
YIPF4
SGO2
FAM207A
RPS29
FRAT2
CSRNP2
LRR1
LSM5
AVL9
HAGH
FAHD1
GSN
TAMM41
AP3B2
NAGK
SEL1L
MDM1
CSDE1
NUP160
CMBL
CSTF1
AURKA
SLC25A19
RGS14
LMAN2
GPR89A
SPATA33
RHBDD2
GET3
CENPBD1
MTMR11
SF3B4
TRAPPC10
VPS4A
RAD9A
PPP1CA
SLC25A36
TSEN54
LLGL2
PPP1R12B
UBE2T
CORO7-PAM16
CORO7
CASKIN2
DNAJA3
SUPT4H1
RFC1
SUV39H1
TOX4
RAB2B
MYO5C
GNG14
FBXW9
TPRN
TMEM203
NDOR1
DDX5
CEP95
POLG2
COQ2
OXR1
DOLPP1
KLF1
GCDH
DNASE2
POLR2J2
H1-10
STK3
KIF6
MTRNR2L8
C12orf45
C1orf54
APH1A
TDRKH
GCSH
C7orf50
CCNG2
FBXL13
ARMC10
SPAG1
ZC3HC1
PRKAR1B
HEATR5A
TRIM4
L2HGDH
DMAC2L
METAP1D
LTN1
COG7
DDX46
USP14
SF3B2
GAL3ST3
DSTYK
DDX11
PIF1
ADCK1
WDR81
NME2
LEO1
SLC27A2
SH3BP5
SPC25
CMC2
CENPN
RHNO1
FOXM1
THUMPD3
BDH1
CEP135
ATP5F1E
STOML1
PML
PRELID3B
INCENP
TUBB3
MC1R
CIT
RBM42
RNF19A
PSMD5
COX6C
FBXW8
MAX
MED23
TMEM39A
POGLUT1
EMC8
COX4I1
NANS
DLD
WDR97
PTGFRN
GPR135
NUP107
NUDT4B
NUDT4
POLE3
C9orf43
ALAD
GOLGA3
PIP4K2C
ABCA5
PHF5A
ACO2
LINS1
ASB7
GUSB
P2RY2
OLFML2A
NR6A1
KCND3
KAT2B
RTEL1
TEDC1
TIGD5
EEF1D
CRIP1
ERAL1
MCCC1
MDM2
SNRPC
MED6
PARP10
GRINA
CNKSR3
EPN1
ARMC2
ATR
CYB561
ATXN1L
ATG7
NEK11
ASTE1
TEX10
PSMG4
LCMT1
VKORC1L1
PLK4
TRIP4
PCLAF
CDC14B
RRP36
MEA1
LRFN4
TRAPPC9
DUSP12
FAM13B
KRR1
GNA13
CAPN7
DENND2C
TAF1C
ADAD2
CYP51A1
SLC35A1
ZNRD2
FAM89B
EHBP1L1
UBE3C
GREB1
MRPS35
DPY19L4
GABARAPL2
ZSWIM9
LIG1
ATP5MG
TOR1B
OTULIN
UBR5
SPDYE7P
TRIP6
POM121
SRRT
APOC2
CLPTM1
ATP9A
PDSS1
SLBP
TMEM129
TACC3
ZNF408
ARHGAP1
HSP90AB1
NUFIP1
GPALPP1
SLC35B2
ADPGK
PRMT6
HPCA
MAP3K3
BAZ1B
KIF20A
BRD8
LOC102724770
DGCR6
DBF4B
CLCC1
STYXL1
MDH2
FPGS
TAF3
GFOD2
KCTD5
CLPTM1L
EXOC2
LIN54
ANKRD28
AP1G1
SPRYD7
RHPN1
SOS1
RABL2B
ANAPC7
C5orf51
LSS
CBLL1
NIFK
CLBA1
RPL32
AHNAK2
HERC4
SENP5
XPR1
PDP1
USP6NL
UBE3D
DOP1A
TFIP11
PSMB7
MXD1
SLC35A2
PIM2
C12orf65
KIAA0319
VPS33A
ASPM
PNPT1
MRPL3
LTO1
RAB14
BCAS1
RFWD3
BMS1
C17orf97
E2F7
SNRNP25
POLR3K
TBL2
EML4
TRIM39-RPP21
TRIM39
RTBDN
MAST1
DYNC2I1
QSOX2
TOMM40
PWP2
LOC102724159
TRIAP1
COX6A1
NUB1
SPATA2
MYBL1
WDR3
GDAP2
CDK5RAP3
PEX3
ADAT2
FANK1
SLC25A44
STX6
ZNF275
SUPV3L1
UBXN11
REXO4
ADAMTS13
EEF2K
GALK1
PTPRU
FAHD2A
PLCL1
SMAGP
GLRX3
ALDH1A3
VTA1
NMBR
CGGBP1
EEFSEC
TNFAIP1
IFT20
ZNF654
DENND4B
TRAPPC6B
PNN
PPM1H
RHEB
GCH1
CACNG4
CBY3
PDIA6
GPLD1
ALDH5A1
RABL2A
IPO11
DIMT1
WDR61
RNASEH2A
PRDX2
SKIV2L
NELFE
PPIL1
TMEM67
PKMYT1
NOL11
RPLP0
GCN1
RIDA
POP1
PRPF3
RUBCN
FANCA
NFATC2IP
USP10
PCMTD2
ALDOA
STRN3
AP4S1
PPP4C
QTRT1
VAC14
THOC3
TMEM120B
PNPLA8
ZMAT3
TADA3
ARPC4-TTLL3
ARPC4
TP53INP1
FANCC
CHCHD6
ARL8B
STRADA
TOMM70
LNP1
PHLPP2
WIPI2
CLCN7
WDR73
NMB
GSTO2
TMEM260
ECT2
TAF5
PRKAR1A
TMEM43
CHCHD4
WDR20
HSP90AA1
TMED4
DDX56
HECTD4
ZSCAN9
NELFCD
SHCBP1
RPIA
PUS7
RINT1
MCM3
SLC7A6OS
PRMT7
FZR1
DOHH
NDUFV3
TKFC
DDB1
FUBP3
CDKN3
RHEBL1
KMT2D
ZHX1-C8orf76
ZHX1
LYRM4
FARS2
TBC1D23
BLOC1S2
DHTKD1
GOLGA1
BOLA2-SMG1P6
MXD3
RAB24
PRELID1
CNOT10
ERLEC1
ASB3
LRRC6
AKAP9
KCNK12
TTC21A
GORASP1
EDC3
CDK7
CHUK
PSME3
BECN1
UBL7
MRPS21
TMEM258
FEN1
TATDN1
NDUFB9
PPM1G
UNK
H3-3B
GRB2
PRRC1
SUB1
MAN1A2
C11orf80
EIF1AD
CST6
BANF1
URM1
DNAAF4
ZFAND2A
RGS20
ATP6V1H
RCE1
SAAL1
COA8
BAG5
ERGIC1