ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089511 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◣ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

BCAS3
HEATR6
PSMD6
MAMDC2
TRIM37
PFDN4
TUBD1
RPS6KB1
DUX4
PARD6B
ZNF217
TEX14
RAD51C
NPAS4
NCOA3
APPBP2
USP32
PPM1D
BCAS4
BRIP1
CREBRF
TTC24
IQGAP3
DYNLRB2
CRBN
DHX40
BMP7
HIPK1
YPEL2
CA4
PPM1E
ALKBH2
UNG
C3orf14
ARFGEF2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
IQSEC3
RNFT1
FBXO32
DCLRE1B
AP4B1
NBPF15
TBX2
ZFYVE1
SIKE1
RRP1
SCRT1
DGAT1
SMG8
BARHL1
METTL1
EEF1AKMT3
CYP27B1
SKA3
MRPL57
HTR5A
MOK
ZC3H18
ARL4D
MYO5C
WASHC5
NSMCE2
EPN1
PHTF1
DYRK1B
SGO1
AP4E1
KPNA2
NOTCH2
RABL2A
C12orf66
TRIM33
UTP20
RRP15
CCNA2
TTF2
NTAQ1
TMOD3
ZEB1
POLQ
FAM214A
TPRN
TMEM203
NDOR1
NUDT4B
NUDT4
TPTE
PDE4DIP
RACGAP1
PTRHD1
CENPO
DZIP3
CIP2A
UBE2C
MBTPS1
CYB561D1
ATXN7
ESPL1
XKR7
SUMF1
EIF2D
KLHDC4
SUPT4H1
SLC45A3
LYSMD2
TMOD2
PIAS3
TICRR
ASB8
CCDC200
GABARAPL2
HEATR5A
GREB1
ZNF331
CKAP2L
DDX49
COPE
NET1
TUBAL3
ABCA5
L1CAM
PIP4P2
NEIL3
NCKAP5L
FAM72B
ZHX3
ARSG
SLC16A6
NDUFAF6
CCNE2
TROAP
THOC7
RIPK2
C16orf46
C16orf71
ANKS3
ATP6V1C1
FANCD2
VANGL1
FAM72C
FAM72D
OAZ3
NUB1
BCAS1
SAP30BP
RECQL5
SLC25A19
SMIM41
ATG101
DNAH7
ATP5F1E
RMDN1
CPNE3
PRELID3B
KLHL24
NCAPH
ITPRIPL1
FANCI
SPEF2
ATG14
QSOX2
HSDL1
DNAAF1
POLR3GL
LIX1L
ANKRD34A
PRMT6
ATP1A1
ATAD2
LATS2
RAB22A
LRRC29
MKI67
NEMP1
DSCC1
MRPS23
MUC3A
NBPF1
NRAS
CSRNP2
FAM72A
TBC1D30
GNS
GFPT1
CFAP69
POLR2K
SPAG1
TP53INP1
ZSCAN2
P2RY2
RUVBL1
MED13
SULF2
TANC2
KCNH6
GFOD2
CPLX2
WDR74
STX5
CDC14B
STYXL1
MDH2
AKAP1
PHLPP2
RASA2
CNPY3
WASHC2A
RNF166
CTU2
NXF1
TTC27
MAPK8IP2
HSF1
BOP1
TSFM
KLHL36
DEPDC1B
SLC12A9
PTPRN2
TASOR2
PPP1R12B
UBE2T
SLC25A24
SKA2
PRR11
ART1
TSEN2
NBN
ZDHHC17
SLITRK3
TTLL11
PLK1
AZIN1
RTEL1
CCT2
MIS18A
CSTF1
AURKA
TRUB2
COQ4
GPR61
GNAI3
GPSM2
TMEM262
ZFPL1
CDCA5
TSR3
GNPTG
LOC101928764
LRRC24
RECQL4
LRRC14
MFSD3
ZMYND8
TCP11L1
TRIP13
BRD9
ATXN1L
PRKCA
FAM227B
DTWD1
METTL2B
DECR1
RNF40
CCDC189
TNPO1
PGBD5
KIF14
GTF2H3
EIF2B1
USP30
CCT5
ATPSCKMT
NPIPB15
TRMT61A
CKB
RABL2B
HM13
PKIG
SERINC3
TCTN2
GPR89B
CSDE1
C7orf50
DMXL2
PRDX6
CEP128
SLC22A15
BICDL1
TBC1D13
GABPB1
HELZ
MCM7
AP4M1
SPATA25
CTSA
ZSWIM1
NEURL2
CENPBD1
CDKL1
DLST
NAGPA
SECISBP2
CKS2
TMEM109
PRPF19
CHD1
DYNC2I1
TMEM39A
POGLUT1
SEC22A
HYOU1
NTNG1
BIRC5
MAD1L1
NUDT1
MRM2
FOXH1
PPP1R16A
REXO4
ADAMTS13
RBSN
UNK
H3-3B
PREX1
CLTC
SARS1
JAGN1
TFF1
POLR2J3
RAE1
MTRNR2L3
DENND2C
NDUFV1
FBXW8
KLHL32
INTS1
NDUFAF4
SLC35B1
LTV1
RABIF
ECT2
RHEBL1
KMT2D
CNOT2
RRP12
BLM
EDC3
C8orf33
CPEB4
PRPF18
GGH
CYB561
AOPEP
PRKAR1A
MRPL4
STRIP1
OXR1
RMND5B
ZDHHC23
RHNO1
FOXM1
BRD3OS
MYL12A
MYL12B
CACNG4
MYO5A
PUS7
RINT1
PTPN1
C1orf54
APH1A
TMEM231
LRFN4
LEO1
GNA13
DHX37
BRI3BP
SPATA2
MFN1
BCAS2
CYB5R1
ADIPOR1
FAM210B
TRIM48
PWP2
LOC102724159
MOCS3
DPM1
BUB1
TRIAP1
COX6A1
SLF2
RNF114
DSTYK
CCDC88A
PIP4K2C
PRC1
ZER1
DYNLL2
CYP24A1
WASHC2C
DBNL
NAA25
HAUS7
SEL1L
CDT1
APRT
SLC35C2
SWI5
GOLGA2
NUP160
C1QBP
MTERF4
TEX2
GMPS
EXO1
CCDC86
TSEN54
LLGL2
CASKIN2
SPTLC1
SKIV2L
NELFE
LARP4
FAM186A
PSRC1
TCTEX1D2
STXBP3
ABTB1
HCFC2
GLT8D2
QTRT2
CCDC191
GPR146
KCND3
MMUT
CENPQ
SPPL2A
E2F7
CA2
ATL2
CCNG2
CENPB
CDC25B
DUS2
DPEP2NB
DDX28
ING4
FBXO33
SLC27A2
DLGAP5
SPC25
ZMAT3
KAT2B
TADA2B
CCDC96
ANKRD46
MAPK6
HABP4
FKBP4
GTSE1
TMEM249
SLC52A2
FBXL6
MXD4
CHFR
SPG7
WIPI2
KIF6
ARMC2
PTPRH
ERN1
RHEB
SNX16
DNAJC25-GNG10
DNAJC25
PDCD2
XPO4
SUSD6
SEL1L2
MACROD2
IPO11
DIMT1
TACO1
RAB5B
PMEL
CDK2
SPOP
SF3B2
GAL3ST3
TBC1D23
MAFG
SIRT7
TADA1
PTBP3
PCYT2
NEK2
NUP107
KLF1
GCDH
DNASE2
WFDC3
DNTTIP1
URM1
SORT1
GKAP1
CCNB1
RPP40
COL23A1
RXYLT1
RTKN2
MAX
PCNX3
MAP3K11
PDIA5
SLC25A13
KAT7
CEP112
TM9SF1
IPO4
SMIM5
GPR89A
UBE2G2
PLEKHM1
VRK1
DIAPH3
FAM207A
GSC2
VSIG10
KIFC1
SFSWAP
METTL2A
ATG7
AMZ2
SPDYE6
LOC100289561
DNM1L
MFSD14C
XRCC2
RAD54B
SLC37A1
RSPH1
GTPBP10
PKD1L3
DHODH
EIF1AD
CST6
BANF1
TMEM18
POLL
DPCD
TRPM7
EMSY
WWP1
PUS1
PDSS1
VCPKMT
SNAPC4
EXOC6
CDCA4
MTFR2
POC5
TTLL4
C20orf27
KANSL2
IQSEC1
AJUBA
PPP2R5C
LMBR1
RECQL
GOLT1B
CRELD1
TAX1BP1
WDR25
WARS1
SEC62
DGKE
C17orf67
KLHL18
KIF9
TDRKH
HSPA5
LRRC59
TXNL4A
RBFA
G2E3
ERCC3
DDX23
PIK3R4
NFATC3
VAC14
TCF19
POU5F1
CCHCR1
ZNF276
VPS9D1
USP8
C7orf26
HECTD4
FBXO28
RRM2
SGO2
CENPW
RTF2
PCNP
KIF18B
UTP23
CLCC1
FRAT1
PSMD4
EDC4
USP10
NPHP3
OTULIN
VAMP3
TPR
ODR4
SLC46A1
PBK
CDK1
UBE3B
KCTD10
ENTPD5
BBOF1
TSN
FBXL3
ANKRD28
NDE1
MARF1
PPM1F
SH3BP5
NFATC2
NOM1
HEATR1
TMEM120B
ZHX1-C8orf76
ZHX1
USP35
KCTD21
LOC112694756
RPL7A
MED22
SURF2
SURF1
DMPK
PCBP2
DMWD
NIT2
SIK1B
SIK1
ASPM
GLE1
AP5Z1
LSS
MDM1
TCOF1
MRPS25
SENP5
SPACA9
AK8
TRIM45
FOXJ1
XPR1
CAPZA2
ZC3H14
PTPN21
SHCBP1
PCOTH
MIPEP
C1QTNF9B
TOP1
EXOC3L1
E2F4
KIAA0895L
FANCC
ZNF212
ARL8B
ELMO3
EXOC5
AP5M1
BRPF1
RPL35
ARPC5L
SRPK2
PDZK1
RBM48
PEX1
DDX19A
FRG2
CHUK
FCF1
AREL1
MXD1
PLCG1
NDUFV3
USP36
FBXO25
ITGB5
SLC25A26
C12orf45
GTPBP4
MDM4
TCP11L2
ZNF706
SAV1
MYL5
ATP5ME
NOL8
CENPP
AEN
CFDP1
CNOT3
KPNA1
E2F8
GTF3C5
SFXN2
ARL3
ZNF622
MKRN2OS
MKRN2
CYP2W1
COX19
TENT5C
IKZF5
ACADSB
SLC35D2
SLC48A1
NKX1-1
RAD18
TWNK
MRPL43
LZTS2
PDXDC1
IDH3A
NOMO2
WDR47
GCSH
STX4
MRPL45
COMMD5
DDX11
STX16
CLPTM1L
CYB5B
SLC15A4
PUM2
USF3
NUF2
UFD1
CDC45
ZGRF1
LARP7
ZFAND2A
VPS13B
TAF3
TADA3
ARPC4-TTLL3
ARPC4
RNASEH2C
KAT5
MED23
CCND3
SCRN3
CIR1
EMC9
RNF31
PSME2
SPRYD3
PMPCA
ENTR1
ADAMTSL4
RNF19B
MARCHF11
SNRPE
FAM24A
METTL3
ATP5MG
NME2
UMPS
AKAP10
SPTAN1
AP3B2
LRPPRC
METTL6
EAF1
USP54
GGCX
CSTB
GCH1
SLC37A3
RAB19
MCM10
FBXO43
NAGK
TAF5
PFDN5
MYG1
PDIA4
ATP6V0A2
RAB21
CHD6
C2orf50
SERPINB6
FBP1
SMYD5
SMC2
DYNC1I2
SART1
PRKAR1B
WDR70
NUP155
RIDA
POP1
YIPF4
MRPL21
IGHMBP2
IFT22
VAV2
TTK
GTF3C4
DDX31
ODF2
EEF1E1
MTMR14
TAF4B
PUF60
SLC35A5
ATG3
NOP9
DHRS1
LTB4R2
H1-10
WDR19
LETMD1
MYEOV
ANKRD60
KCNJ14
GRWD1
NAA35
PSMB4
CALM1
TMEM251
MOAP1
MARCHF6
USP42
PCYOX1L
TSPAN9
MYBL2
SH3BGR
LCA5L
ROPN1L
DNAAF4
LIN9
IFT46
ARCN1
SLC25A40
DBF4
MRPS14
UBR5
XPOT
NEPRO
ANKRD13A
FBH1
ANKRD16
GIT2
KIF2A
TDRD1
CCDC186
ZDHHC7
PRRT4
NME1
CCDC146
COG7
C6orf89
TAMM41
GPAM
NGDN
PIP4P1
OSGEP
APEX1
LSM14B
TMEM41A
PNP
SYF2
C8orf76
VGLL4
LRRC37A3
ABHD4
DAD1
MEFV
TRAPPC6B
PNN
MTHFD2
STK3
SLC2A6
STAT1
MED20
BYSL
TTLL5
ERG28
PPP2R5B
ATG2A
HAUS5
TMEM127
CIAO1
MAP3K3
SLCO4A1
ZNF451
VIPAS39
AHSA1
TULP3
UBA2
VPS4A
CIZ1
ZBTB38
B4GALT4
ZNF778
ANAPC7
PRMT2
CDIPT
PDF
NIP7
COG8
PRKAB1
MACROD1
RFWD3
RSL1D1
RMDN3
GCHFR
ULK1
TXLNG
AP5B1
OVOL1
LUC7L3
DBNDD2
SDAD1
CMC2
CENPN
WDR43
PSMD12
SSNA1
ANAPC2
SMARCA4
VPS72
PIP5K1A
NDUFB3
FAM126B
GOLGB1
OSGIN2
SEMA4B
CHPT1
NPRL3
CDK7
ASF1B
FAM180B
NDUFS3
KBTBD4
DCTPP1
HACL1
BTD
MMS22L
SDF2L1
TOP3B
CAPN7
GPR107
AUH
ASCC2
NR4A2
SUB1
PSME1
FITM1
PRKAA1
UNC119B
KCTD3
MATN2
ZNF688
EIF3C
EIF3CL
UBFD1
EARS2
HEATR5B
GPATCH11
POLR3F
DZANK1
DPY19L4
ARFGAP1
IFT88
SAC3D1
FAM161B
COQ6
RFX1
YIPF3
POLR1C
LRRC73
KIF3A
CCNI2
TRIM25