ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025675 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◣ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

UTP25
PEMT
UNC45B
PMF1-BGLAP
PMF1
NME2
SRSF1
SNX25
CFAP97
NME1
DRG2
NPM1
AKAP10
ZNF485
METTL1
EEF1AKMT3
CYP27B1
LSM12
G6PC3
HMGA1
VMP1
PTRH2
NOLC1
CCDC86
ODC1
SELENOO
TRIM16
ATAD3A
C1QBP
CAD
NCL
PDCD11
ATP5MD
LSG1
SLC25A10
GPAM
GID8
DIDO1
NOP16
HIGD2A
TENT4A
DHX33
RPLP0
DIAPH1
GCFC2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
GTF3C4
DDX31
IARS1
HNRNPU
SLC35E2A
MDN1
SLCO4A1
SPRYD4
SNRPD1
FTL
TMEM33
THOP1
SGTA
MTHFD1L
MAGOHB
ZSWIM7
TTC19
MAT2A
RSL1D1
SLC35E2B
SNF8
HSPB1
DDX42
CCDC47
GET4
AASDH
CLN6
PSMB2
OSGIN1
MAN1B1
FAF1
MRTO4
EMC1
GCN1
HSP90AB1
HSPA8
PIGL
NCOR1
TBRG4
LARP1
TMEM107
UBE2K
UAP1
PRKAR1B
RAD50
PPIA
ATAD3B
SPATC1
PTDSS2
TFRC
FARSB
ATRAID
SLC5A6
SCAND1
CBWD5
TRIAP1
NOC4L
DDX51
TOMM34
AEN
EIF3M
PLD6
GATAD2A
EPRS1
TBL1XR1
CENPV
RBM42
NCBP2AS2
NCBP2
NFE2L2
ZNF296
GEMIN7
TIMM23
SSNA1
ANAPC2
MSTO1
INO80
GPSM3
ABT1
DDX21
SMYD2
PMP22
IGF2BP3
GARS1
MTRNR2L8
MBD3
PPRC1
PTMA
PSMG4
HNRNPF
B9D1
IFRD2
KDM6B
SIK1B
SIK1
SDAD1
CBWD3
GAR1
HPX
EEF2K
HNRNPA2B1
CBX3
PDS5A
CKAP5
PAK1IP1
C6orf52
YRDC
C1orf122
CARNMT1
ZKSCAN2
OSGEP
APEX1
NAT10
DPH5
JADE2
EIF5A
TMEM248
RPL18A
EIF4EBP1
NCR3LG1
TMEM38A
SMIM7
TMPRSS9
PINX1
MED9
SLC25A33
MRPL15
SPHK1
PCID2
CUL4A
HAX1
MLLT1
TRIP6
MRPL3
RMDN3
RPUSD4
FAM118B
SUMF2
EEF1A1
EIF3B
WNT2B
NOTCH2
RSBN1L
ENG
ZNF3
FBL
GNPDA1
PLK3
GABPB1
PMS2
AIMP2
UTP4
DERPC
CHTF8
HAUS5
MARVELD1
QSOX2
CUTC
COX15
MAP2K3
FAM83G
YBX1
UTP18
MBTD1
MRPS23
NT5M
TRPM7
CSE1L
MAPKAPK5
URB1
TRMT6
MCM8
USP32
PFAS
CTC1
PPAN-P2RY11
PPAN
ANGPTL6
MRPL4
KMT5B
HDGF
GPX1
SAMD10
PRPF6
FNTA
YARS1
S100PBP
TBL3
PWP1
COX10
L3HYPDH
JKAMP
WDR3
GDAP2
TOMM20
RUVBL1
NDUFS1
EEF1B2
SMIM12
PCBP1
AGPAT5
DUS3L
ASPSCR1
MRRF
HSPA9
SLC2A1
NR1D1
PARP1
EBNA1BP2
CFAP57
RPL36A-HNRNPH2
RPL36A
BTK
RRP9
PARP3
PABPC4
BAX
SIRT4
TWNK
MRPL43
RPL10A
PSMB6
UBTD1
MMS19
PNP
ZSCAN22
KEAP1
CWC25
C16orf91
NUP50
RRP1B
HSF2BP
VIM
SECISBP2
EPB41
CRLS1
LMNA
RRM1
ZNF410
XPO6
KTN1
CLIC3
URB2
TAF5L
DGLUCY
GPR89A
MRPS17
SLC25A45
FRMD8
CNOT8
BZW2
ANKMY2
AATF
DR1
PSMC2
DNAJC2
MACROD1
TAF5
PAQR7
TMEM39A
HSCB
CHEK2
SCFD2
TRMT61A
SEC14L1
TBC1D15
ATIC
METAP1D
NEURL4
GPR157
MANBAL
CDCA8
C1orf109
YBX2
PTP4A2
PFDN2
NIT1
MACIR
POLD2
SEC31A
B3GNTL1
RRS1
ADHFE1
WDR18
SLC5A3
MRPS6
BLMH
FOXP4
SMARCC1
CCDC115
LDHB
TRAF3
IMP4
EPM2A
TOMM7
MRPL2
KLC4
MTHFD2
TOP3A
SMCR8
THNSL1
RCC2
TMEM186
PMM2
SAMM50
LONP1
CATSPERD
AHCTF1
TATDN1
NDUFB9
PHF7
BAP1
RPE
ELK4
PPP1R15B
ZNHIT6
CLCN7
KCNQ5
PAFAH1B2
EIF4A1
SLC3A2
TAMM41
RPS16
POLD1
TBC1D24
NTN3
XPOT
MRPL55
MYBBP1A
TTLL4
UBQLN4
LAMTOR2
TSPAN4
POLR2L
RPS21
TFB1M
NOL8
CENPP
SLC19A2
CACNB3
P4HB
HAGHL
CCDC78
AKAP1
ZFP36L2
SCD
XPO1
KMT2D
KHDRBS1
MARS2
PKP4
CCDC148
SLC16A1
SLC39A3
CLK2
CLUAP1
C16orf90
METAP1
CTU1
RPS18
B3GALT4
VPS52
ELP3
SLC29A1
GPN3
FAM216A
MTRNR2L2
MSH3
DHFR
RBM28
GLRX2
PPP1R13L
POLR1G
SOD2
CBWD6
PRPF3
SSB
WTAP
ACBD5
CAPZA2
POGK
HEATR1
DUSP12
MAP3K7CL
CCT8
DUS2
DDX28
TBK1
EIF4E
IFI27L1
DDX24
COPS3
ACYP2
PSME4
GTF3A
ARSG
SLC16A6
MEF2D
TBL1X
EIF4H
SLC39A14
SHQ1
DYM
NLE1
MPZL1
SREBF1
THRAP3
PSMA7
ITGB3BP
EFCAB7
ANKRD40
CNOT11
GTPBP4
PLAC8
TRABD
RSAD1
DLAT
C10orf95
HDAC7
NSMCE4A
UTP11
USP22
ADORA2B
ZNF460
TUBA1C
YIPF3
POLR1C
USP16
PHLDB1
RBBP5
ABLIM1
RCC1
LRRC58
ZNF202
AP2B1
TBC1D22A
CHD1L
SPTSSA
FBXL4
MET
NBEAL2
CCDC12
USO1
IPO4
ATXN2
YDJC
CCDC116
UNKL
CYCS
ZNF787
PRR7
METTL8
DCAF17
UBR5
WDR7
MRM3
GLOD4
CNBP
PFN2
MBNL1
ZNF639
TARS1
SUPV3L1
STAMBPL1
HS3ST3A1
RPL7L1
RPS23
ATP6AP1L
MIDEAS
ZNF276
VPS9D1
SPAG9
RRP1
TVP23B
METTL15
KIF18A
DNAJC11
FABP5
P3H4
FKBP10
MRPS25
MRPL44
GDI2
SLC35E1
DIMT1
TNPO2
MMAA
RRM2
CLNS1A
RGS9BP
ANKRD27
UBAC1
HNRNPL
PES1
RPL38
ACBD6
SLC2A5
UBR3
METTL5
SFSWAP
TIMM23B
PARG
LRRC59
PDHB
HDHD5
PRELID3A
XPO5
POLH
ZC3H15
SLX1B
SLX1A
BOLA2B
BOLA2
USP14
NOXA1
NTMT1
SH2B2
LUC7L2
SEC61G
UBALD1
LDAH
USP36
TM2D3
UBFD1
EARS2
NOP58
JPT2
ZNF121
HK2
FOSL2
RAN
NOL10
CEP192
EIF3C
EIF3CL
TCTEX1D4
BTBD19
RPL8
ZNF34
COA8
BAG5
DNAJC19
SYNCRIP
EEA1
MAP4
FARSA
CALR
FAM227B
DTWD1
SH2B1
TUFM
TMEM268
MCIDAS
MRPL24
DNTTIP2
GOLIM4
TMA16
ICE2
UTP14A
PSMC5
FTSJ3
CTBP2
AK2
GOLGA3
PEBP1
PRMT3
MAK16
ERLIN2
TUBGCP6
NRAS
PMPCA
ENTR1
PIK3R3
SP3
ATP5F1E
FAM98A
ZZZ3
DHX37
BRI3BP
TAF4B
NFIC
SRD5A1
NSUN2
NUP153
CELSR3
DKC1
RIOK1
CAGE1
SPRED1
RTN4RL1
DPH1
CHD1
HINFP
NOP56
BIRC5
OPA1
PPP2R3B
HES4
NFAT5
SLC9B2
COL19A1
UCHL3
COMMD6
FKTN
P2RX2
LRCOL1
PBRM1
GNL3
BRICD5
KAZALD1
PGP
SOS1
CTSC
CRIM1
KDM3A
FANCD2
SMARCD2
SINHCAF
NT5C3A
RPIA
MXI1
FAM53C
CDC25C
MAFK
CBWD1
SNRPE
NUDT5
CDC123
FOXJ3
COA1
CLUH
ATXN1L
FRA10AC1
RPL14
RPS8
UBA52
TRIB1
PHC2
CHKA
MPHOSPH6
CTPS1
ING5
DDI2
SUGP2
ARMC6
TAF13
ZBTB44
COPS6
SOX12
PSPH
CCT6A
CEBPZ
PHLDA2
ERCC6L2
SHLD2
GLUD1
CAST
RPS6KB2
B4GALT7
ZWILCH
RPL4
NACA
ATG101
ANP32B
SUCLG2
MTG1
C8orf33
CNDP2
THADA
HMGB1
USPL1
RNF139
UBE2G2
TIMM44
UBB
MID1IP1
TFAP4
JAG1
MRPL45
TRUB2
COQ4
TRAP1
TRIP13
BRD9
RCOR3
PUS1
RIOX2
NQO1
RNASEH1
CENPF
CACNA1S
ASCL5
ITPA
DDRGK1
MRPL21
IGHMBP2
TAOK2
TRIM48
B3GAT3
COPS7B
SUPT3H
POPDC3
DPAGT1
C2CD2L
PAAF1
COA4
RAD52
NELFCD
WDR36
WDR26
SEPTIN9
SRRM2
PET117
KAT14
MRPL27
EME1
PTPN6
C12orf57
TBCE
DOCK5
HSPA4
CFAP20
TMUB1
AGAP3
DGKB
NOB1
NUP214
CIAO3
SF3A3
LTV1
PPAT
PAICS
TSGA10
PRPF4
CDC26
TNRC18
UTP15
ANKRA2
LRRC46
LOC100129484
RASSF1
ZBTB24
PDP2
ZNF598
ITGA3
WDR4
RPS5
POLI
ASAP1
KLC1
ANP32A
SPCS3
SLC2A4RG
LIME1
SPOUT1
NDUFC1
NAA15
TMCO1
SEC24D
DDX18
PTDSS1
MTERF3
RPL30
SNAP47
JMJD4
ZC3H8
ADPGK
SPTY2D1
CAMSAP2
EMC8
COX4I1
WDPCP
MDH1
TXN
TRAF7
PPM1G
HSPE1-MOB4
HSPE1
HSPD1
TTC7A
MCFD2
NOM1
APP
COX20
RCOR1
PGRMC2
ZNF165
PRPF19
RNF168
TEX2
STYXL1
MDH2
WDR43
UBE2S
LIMS1
TIPIN
ATG5
RPLP2
PIDD1
GBA
PRMT1
EIF3A
POLE3
C9orf43
EMP3
CCDC114
SART3
ISCU
SRSF2
MFSD11
CAAP1
JMY
DDX59
DRAM1
GNA13
GALNT7
CLPTM1L
NUP133
DNAJC9
CST6
IMP3
SMG8
ENO1
RNF145
PSD3
CEP83
SPOPL
LANCL2
HM13
MAGOH
DDX5
CEP95
MRPS15
TBC1D23
WDR55
GEMIN6
STK19
DXO
NBPF15
GNL2
CACUL1
NOCT
RPUSD2
CCDC32
PDSS1
FOSL1
TRPV2
TESMIN
RIN3
POM121
DCP1A
RPS11
RALGDS
TRA2B
JUNB
TRMT61B
UTP3
CCT2
EPOP
NHP2
GFM1
SLC25A32
DCAF13
SOX9
SRSF11
BTF3
TIMM13
MTBP
MRPL13
MCMBP
TUBA1B
MDM4
PHIP
YKT6
ZNF496
IRF2BP2
ZBTB37
BCAR1
ZNF785
GPATCH1
C10orf88
ZNF692
DDX19A
TRUB1
SERBP1
DDX49
COPE
LEO1
RASA1
RPP38
KRI1
CDKN2D
SETD5
TBCB
POLR2I
OVOL3
TMEM41A
MTA2
WTIP
DPY19L3
SMIM19
SLC20A2
PANK2
SLC22A18
PTBP1
WASHC2C
PIH1D2
NKAPD1
PAFAH2
FAM20B
SMC3
G3BP1
DDX50
NAA38
TMEM88
CYB5D1
CHERP
FAM156A
FAM156B
PUM3
RPS13
NUDT9
B4GALT2
ATP6V0B
LDLRAD3
SLC7A5
MCTS1
RANBP3
ZNF286A
ZFP91
LPXN
ABCB10
SSU72
SUGCT
MPLKIP
EBAG9
FAM98B
SMN2
SMN1
PPP4R3A
SLC25A37
CNIH3
RPS19
PVR
FLCN
ZNF205
TSEN54
CASKIN2
C19orf48
NME4
DECR2
PROZ