ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SOX9 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
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SOX9's Target genes

◣ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX768290: HT-29

◢ SRX359919: LoVo

◢ SRX1510444: VCaP

◢ SOX9: STRING

TRIM48
MAMDC2
ARRDC4
MTRNR2L2
MSH3
DHFR
MTRNR2L8
SNX16
DOLPP1
POR
ZBTB32
IQCH
AAGAB
POLG
KHSRP
PARK7
RGPD2
RGPD1
TAF15
WDR97
MAF1
SLC35E2B
SNAP29
PI4KA
ZNF775
PPIB
DUX4
RNF13
CNOT6
MRPS24
AKIRIN1
TMEM160
PRR19
PAFAH1B3
HMGCS1
WDR74
PFDN4
SLC35E2A
NOP56
KAT7
RASSF7
LMNTD2
UBE2C
RNASEH2A
PRDX2
PROSER3
HSPB6
FAM72C
FAM72A
PTOV1
PMF1-BGLAP
PMF1
MYO9B
HAUS8
DLST
MTRNR2L1
WASL
STIP1
CIC
ATG101
OGA
HBB
ARAF
PITPNM1
SPATC1L
MAGIX
PHRF1
PDXDC1
HHIPL1
CCDC85C
ZNF8
EED
UBA1
CDON
ZNF335
FAM72B
GNB2
BZW2
ANKMY2
ATP6V0C
PIK3R3
MUC3A
RPL35
ARPC5L
COL23A1
PRKDC
MCM4
HNRNPL
TOP2A
ETV2
COX6B1
CCNL2
USP15
PRR3
GNL1
MBLAC1
UIMC1
TTC9B
CCNP
DBP
TEPSIN
NDUFAF8
SELENOW
DNMT1
UCHL3
COMMD6
BRICD5
PRKCI
RAB4B
MIA
CNOT1
UROS
BCCIP
TMEM45A
C6orf226
RHBDD3
EWSR1
TARDBP
PSPN
ALKBH7
CDCA7L
PAXIP1
TRAPPC6B
PNN
TANGO2
ARVCF
RMND5B
METTL25
CCDC59
CNOT3
SHKBP1
HDAC1
RRM2
NUCB2
FAM83D
GIT2
ANKRD13A
PGP
SLC25A42
LIN54
FAM72D
ZMYM2
SP2
FUS
FANCI
NDST2
TBC1D17
AKT1S1
ANKRD12
NCDN
KIAA0319L
MYL12A
DPP9
PTP4A2
ANP32A
LUC7L2
CDC25C
YY1AP1
DAP3
TUBB4B
DNAAF3
PRKACA
PPP5D1
CALM3
EIF3B
CENPE
ZNF519
MTRNR2L9
ARNTL
PPP1R13L
POLR1G
DISP3
FRAT2
TSKS
AP2A1
MRPS11
MRPL46
LEMD2
NFYC
TIGD5
EEF1D
ATP5PD
UBE2A
ANKRD39
CENPN
TRAF2
PTDSS1
MTERF3
PRCP
DDIAS
PPDPF
FRAT1
HNRNPA1
CBX5
FAM53C
FMC1-LUC7L2
FMC1
PRDM10
PMVK
SERTAD1
SYVN1
STX16
SOD2
UBE2B
CDKL3
PRKAG2
PIP4K2B
FOS
TCP11L2
SKA2
PRR11
KIF1B
MYT1
C2orf42
RPL19
CSNK2A1
CACNB1
ATG16L2
RBM42
UFSP2
C4orf47
IQCE
PIF1
AK2
LRCH4
FBXO24
DOHH
RNF103-CHMP3
RMND5A
OSBPL2
ATP5F1B
RPL22
ATP8A1
SSNA1
ANAPC2
UQCRQ
SLX1B
SLX1A
GDF9
FBXO5
BOLA2B
BOLA2
MADD
PSIP1
NR6A1
ISOC2
HDAC2
BOLA2-SMG1P6
ATP5MC1
KATNB1
UFD1
CDC45
ZNF687
INAVA
HNRNPUL1
WASHC5
NSMCE2
UQCRC2
GIPC1
CSPP1
COPS5
HDGFL2
CDK16
NLK
COQ8A
KCTD7
PCLAF
OGDH
H3C15
H3C14
H2AC19
H2AC18
DGAT2
GTF2IRD2B
GTF2IRD2
ZNF574
LRPPRC
SELENOH
PANK2
KMT5C
BCL6
EFNB2
ZMYM5
SRI
MOCS3
DPM1
TSPAN4
POLR2L
PDK2
FOSL1
WDR62
THAP8
CKAP5
MSANTD4
HOMEZ
POLR2J3
PPFIA3
LIN7B
C19orf73
ALDH4A1
PRRC2B
ATG9B
ABCB8
TMTC4
VBP1
CCT5
ATPSCKMT
TTBK2
RPN2
MROH8
RRBP1
LRRC61
ACTR3C
OPA3
MTCH1
IVD
DOT1L
CANX
MRPS31
WDR45
C6orf62
UNG
TPBG
ATP5IF1
ALKBH2
RNASEK
C17orf49
HNRNPC
PRMT1
DIAPH1
CWC25
RAB7A
C7orf57
RLN2
PLEKHG5
BAZ1B
KLF6
SMARCAL1
TMEM218
TRIP4
CDK5RAP2
PPWD1
IFT52
FANCF
CENPK
MRPL21
IGHMBP2
CD164
MYL12B
LIPE
ZNF484
HRC
RBM27
H2AZ2
ZSWIM1
CDIPT
PTCD3
POLR1A
CNPY3
PRR14
PLAG1
CHCHD7
USP31
CHCHD6
NDUFB1
LSR
CPSF2
SPRYD3
NOL8
CENPP
GNG3
GATAD2B
BSCL2
ARHGAP19
PNKP
OSBP
ATF7-NPFF
ATF7
SF3A3
PKNOX1
TYK2
EIF2D
SMC3
SREK1IP1
EIF3F
CWC27
SLBP
KANSL1
CENPA
TFPT
PRPF31
FDFT1
TOM1
ZFAND4
PLXNA3
TTLL7
ZFAND3
USPL1
HMGB1
SIRT2
NFKBIB
SS18
RUVBL2
MAMSTR
GYS1
SETD5
MPHOSPH8
MYH14
MTMR12
KCNAB2
ANKRD17
FLCN
ZSWIM4
ZNF219
TMEM253
SLC46A3
LMTK2
FAAP24
CEP89
C21orf91
DAZAP2
DGCR8
ZNF77
SPATA17
OXR1
GPATCH2
ZNF564
KMT2E
ASH1L
BCAS3
NDUFS7
ANKZF1
RLN1
MZT1
BORA
UQCRH
TMEM260
MAOA
LRRC41
NOCT
ABTB2
LAMP1
CCDC102A
SIGMAR1
MGRN1
RNF6
ANKHD1-EIF4EBP3
ANKHD1
ACTN1
H4C14
F11R
ZSCAN22
SRPK2
RITA1
DDX54
NARF
MIA2
DCUN1D4
SPTLC2
PXMP4
MED23
ACAP2
LENG1
DRAP1
C11orf68
ENSA
CALU
JPT2
PTCD2
MRPS27
RAVER1
PABPN1
H2BC12
H2AC12
SLX4IP
MKKS
RFX1
YJU2
HIBADH
PRKCZ
YIF1A
UTP18
TMEM151A
MBTD1
MAP1LC3B
FBXO31
NDUFS3
KBTBD4
TADA3
ARPC4-TTLL3
ARPC4
TBL3
SPSB3
POLR3B
NUBP2
MIA3
METTL3
G3BP1
CDKN3
SUPT4H1
AFF1
STRIP1
HACD2
ZBTB3
SSBP1
H4C15
PSPH
CCT6A
TMEM242
MTMR14
ISG20
ENPP5
FASN
PRR12
TNRC6B
TCERG1
FAM110A
MCM10
DNM2
CEP164
TBC1D10B
PEX3
MYLPF
ADAT2
CDCA3
ZDHHC5
SAP30L
P4HB
CCNB2
KLK6
GTF2H2C_2
GTF2H2C
ZNF138
NOP53
SASH1
TSR3
TPST1
SRXN1
SPAG7
GNPTG
ZNF92
BCL9L
TINAGL1
TDRD7
USP3
ZNF212
STK35
PER1
MRM3
MAT2A
GLOD4
SIPA1L2
NECTIN3
SFXN5
FAM20B
TMEM94
RMI1
PAIP2B
MEIS1
HNRNPK
SPNS1
GGCT
GATAD2A
PAK4
ACAT2
RECQL
GOLT1B
FARSA
CALR
VDR
TIMM50
SCAND1
RAB5B
CXorf56
RUVBL1
HEXA
TOMM40
ABHD2
EIF4A1
C1orf174
RAB1B
PLEKHM3
CXXC1
TRAPPC9
HSP90B1
FLAD1
FCHSD2
SP1
PGAP2
SRM
CBWD5
MAN2C1
ZSWIM3
FRMD6
ACOT8
DYNLL1
TMEM183A
MTF2
GTF2H2
GOT1
KLF5
FAM126A
ADPGK
RAB28
ACTL6A
HNRNPAB
EIF2AK3
MRPS15
WDR70
NAGPA
TPRN
TMEM203
NDOR1
CCDC174
RWDD1
PRKCSH
CCDC151
TATDN3
RBBP6
NSL1
RAB40C
RAB40B
COPS7B
ATP5F1E
PPP6R3
CDT1
ING1
MTERF4
LANCL2
STX18
FBXO33
CCDC77
H4-16
H2AJ
COA1
FRG2
CBWD3
FAM227A
CBY1
TSPAN31
RPS20
LAPTM4A
AGAP2
ZSCAN25
HBP1
MORN4
SLC25A38
NUP107
ZNF175
RHPN1
GOLPH3L
FSIP1
DDX41
TMEM248
KAT6B
AKT2
ZCCHC4
PACSIN2
MRPL44
TOM1L2
DRC3
BCL2L1
ANAPC5
CUL2
COMMD9
SMARCD2
STEAP2
IMP3
FAM156A
ATAD3B
TRAFD1
SLMAP
DPY19L4
PPP2R5A
GTF2H3
EIF2B1
PSMA7
PRR25
STT3A
RBBP5
ZNHIT1
RALY
PLOD3
HMGCR
TRIAP1
SIRT4
FRG2C
CDK5RAP1
GRIPAP1
PDIA4
UGP2
SPAG8
RCN2
HINT2
DYRK1B
FAM227B
DTWD1
CCDC200
ZNF273
TMEM199
POLDIP2
SLC24A1
SF3B6
SEC13
PCYOX1L
FAM228B
SLC39A4
RBM28
CPSF1
UTP23
DIAPH3
COMMD1
CCT4
BZW1
MRPL45
ZFAND2A
TK1
BNIP1
AFMID
ABHD11
RNF5
NLE1
HSPA5
AGPAT1
AP3M2
SDF4
RBBP8NL
B3GALT6
PPP6R1
IER5L
SLC45A4
IMMP1L
ELP4
DOK4
VPS26B
PER2
NUF2
NCAPD3
GLO1
COPZ1
PCNA
NR1H3
LSG1
ACP2
ERV3-1-ZNF117
ERV3-1
ZBTB45
ADD1
WRAP53
TPCN1
TP53
RFWD3
NAT10
ZFYVE21
XRCC3
MAMDC4
LOC101927572
ALKBH6
ST3GAL3
NOC4L
MACO1
DDX51
ALG10B
ZNF830
PCID2
DNAJC28
CUL4A
CCT6B
HYAL2
ALKBH3
WDR31
RPL13A
LRRC56
HRAS
TTF1
CFAP77
PPM1L
TTC16
TRAPPC3
PTRH1
PTMA
MAP7D1
FRYL
CFAP43
TRIP10
SMG8
SAR1B
GPR108
WASF2
TTC4
RPTOR
WASHC2A
JUNB
GPSM3
IGSF9B
FBH1
CCDC61
ANKRD16
CEP63
ANAPC13
DDX19B
TACC1
MACC1
ERI3
NOTCH2NLC
MSH2
NFIB
CYCS
IARS1
HERC2
PRRT1
PPT2
NUP214
KANSL2
CHD9
KDM4B
ECH1
CENPF
ZNF165
PPP2R1A
NOTCH2NLB
NOTCH2NLA
COG2
NDUFC2-KCTD14
NDUFC2
LARP4
FAM186A
CTPS1
NME1
SLC25A25
NAIF1
NADSYN1
DHCR7
ATP6AP1
CASC3
C1orf198
SMC1A
SEPTIN11
RIBC1
MRPL16
MAPKAPK5
PDE6D
LRRC59
TBCB
POLR2I
OVOL3
MYEOV
SPATA25
NEURL2
LYRM1
HSPBP1
HAGH
FAHD1
DCUN1D3
CTSA
CELSR3
BRSK1
ZNF195
RAB11B
NRL
DCAF11
CBX8
TRIB1
RGMB
SDHAF3
SARNP
ORMDL2
MRPS23
TMEM256
NLGN2
TSFM
TRUB2
COQ4
TMEM217
TBC1D22B