ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3798674 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◣ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

UTP25
SNX25
CFAP97
THOP1
SGTA
BAX
CAD
ATRAID
PTDSS2
SPRYD4
AKAP10
CCDC86
ZNF296
GEMIN7
LSM12
G6PC3
MSTO1
TENT4A
NME1
DHX33
NME2
DIAPH1
MTHFD1L
ZNF485
SNRPD1
GNPDA1
HMGA1
DRG2
UBE2K
SLC25A10
GARS1
TBL1XR1
GTF3C4
DDX31
SMYD2
EEF2K
PSMG4
GPSM3
KEAP1
TMEM248
YBX2
NOC4L
DDX51
MDN1
TRIAP1
CBWD5
CBWD3
CBWD6
FAF1
IARS1
SRSF1
GET4
CLCN7
CARNMT1
GCN1
NRAS
ADORA2B
PMS2
AIMP2
METTL1
EEF1AKMT3
CYP27B1
GATAD2A
PEMT
PINX1
SAMD10
PRPF6
LARP1
SNF8
IGF2BP3
PAQR7
B9D1
ZSWIM7
TTC19
SLC25A33
GOLIM4
HS3ST3A1
PCBP1
EIF3B
LAMP1
SCAND1
GAR1
PPRC1
FAM83G
LONP1
CATSPERD
EIF5A
C10orf95
METAP1D
AKAP1
UBE2S
MRPL3
STAMBPL1
PLD6
PDS5A
RAN
NPM1
RAD50
UTP11
CCT2
B3GNTL1
TRPM7
GABPB1
PRKAR1B
AEN
DR1
PMP22
SLCO4A1
EBNA1BP2
CFAP57
MTHFD2
CENPV
NT5M
GPAM
NCL
KDM6B
COPS3
HNRNPU
MRPS17
ODC1
CLN6
KCNQ5
NUP50
TRMT6
MCM8
DUS2
DDX28
DPH5
MRRF
SLC25A45
FRMD8
PARP1
TBRG4
SPHK1
GID8
DIDO1
NDUFS1
EEF1B2
VMP1
PTRH2
NOLC1
TAF4B
MARVELD1
GCFC2
DDX42
CCDC47
CSE1L
GTF3A
TNRC18
LOC100129484
WNT2B
OSGIN1
SLC35E2A
TAF5
AASDH
NCBP2AS2
NCBP2
JADE2
EPOP
NOP16
HIGD2A
ZNF664-RFLNA
ZNF664
CCDC92
C16orf91
SH2B2
MRPL15
FNTA
SLC5A6
TIMM23B
PARG
SEC14L1
TSNAX
BRICD5
PGP
KMT2D
SLC16A1
MED9
ACYP2
PSME4
MAP2K2
NOC3L
POPDC3
UTP4
DERPC
CHTF8
EIF4H
GYG1
RBM28
HNRNPF
ARSG
SLC16A6
UBP1
SLC39A14
MLLT1
DIMT1
PIAS2
KATNAL2
PAFAH1B2
AATF
CNOT8
MAN1B1
CACNB3
C1QBP
ACBD6
SSNA1
ANAPC2
TBL3
RNF151
TRPC4AP
CNBP
MAGOHB
SIK1B
SIK1
UTP18
MBTD1
URB2
TAF5L
TSR1
SGSM2
CBWD1
DNAJC11
UBE2G2
PLK3
ZFP36L2
SF3A3
FAM98A
TRMT61B
SPTY2D1
MBD3
ZNF3
MTG1
RRP1
MRPL55
HES4
TTLL4
PRR7
PRPF3
POM121
BCAT1
USP32
TET3
MEF2D
MAP2K3
DGLUCY
RCC2
SECISBP2
CLPTM1L
SOD2
WTAP
EEA1
CELSR3
GPR157
TRABD
COA8
BAG5
RRP1B
HSF2BP
EIF4B
NAT10
HSCB
CHEK2
PIGL
NCOR1
PRPF19
TRMT61A
TSPAN4
POLR2L
CTU1
SEC31A
USP36
PUS1
HAGHL
CCDC78
PEBP1
POLI
SFSWAP
PDCD11
ATP5MD
PRMT1
TRAP1
YBX1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SYNCRIP
ZNF639
MRTO4
EMC1
SLC35E2B
TUBGCP6
ZZZ3
AGPAT5
TRIP13
BRD9
NCR3LG1
WDR74
PPIA
TMEM38A
SMIM7
SNRPE
USP14
RAD9A
COPS6
RYBP
SLC19A2
MRPL21
IGHMBP2
BIRC5
TRIP6
SPTSSA
NRP2
SLC3A2
CLUAP1
C16orf90
OSGEP
APEX1
HK2
LOC100289561
SAMD13
C8orf33
NT5C3A
ZNF706
HDAC7
CYB561
HPS1
TMEM268
RALGDS
CWC25
TUBB4B
ASAP1
ANP32B
MRM3
GLOD4
GPN3
FAM216A
UBAC1
LRRC58
ATL3
TIMM23
TATDN1
NDUFB9
PLAC8
MAPKAPK5
RPS23
ATP6AP1L
THNSL1
NOL8
CENPP
PES1
ATIC
COX10
ATXN2
TIPIN
TTC7A
MCFD2
HSP90AB1
TOMM34
WDR18
FLRT2
PFAS
CTC1
POLD1
MAT2A
UCK2
GTF2H3
EIF2B1
FOXK1
UBE2Q1
RSBN1L
HLTF
XPO5
POLH
PTMA
SRSF11
SRRD
HPS4
IARS2
BPNT1
POGK
PDHB
DCP1A
NBPF1
SUMF2
SUPT3H
UCHL3
COMMD6
ZBTB44
RRM2
SCD
WDR43
KAZALD1
ENO1
TMEM33
DUSP12
WDR4
THUMPD3
NELFCD
PPAT
PAICS
TRIM16
TRAF3
INTS1
C14orf93
FAM227B
DTWD1
UBR3
METTL5
FAM156A
FAM156B
SREK1
IRX5
AMDHD2
PKP4
CCDC148
GNL2
CTPS1
CLK2
MRPL4
GIGYF1
FBXL4
ECPAS
LYSMD2
RNF2
LDHA
TIMM44
DDX19A
ZC3H12C
PHF7
BAP1
FLCN
METAP1
STAG1
AHI1
MFSD4B
GEMIN8
SMARCC1
ZNF202
KLF16
YARS1
S100PBP
NFE2L2
SIAH2
WASHC2C
MID1IP1
ZNFX1
ABLIM1
KMT5B
CAPZA2
USO1
RANBP2
MBNL1
TBL1X
LUC7L3
SNRPC
QTRT1
PHLDB1
DYM
OPA1
ZNF410
TVP23B
FBXW8
R3HDM2
INHBC
FLVCR1
NT5DC3
ZKSCAN2
RLF
NOB1
SRD5A1
NSUN2
TERF2IP
KARS1
ZBTB25
ZBTB1
TFB1M
RBM42
NFAT5
FAN1
SLC29A1
POU2F1
TPRA1
RSL1D1
ELAVL3
TMEM116
ERP29
KLC1
AKR1A1
SNAP47
JMJD4
ARRDC2
RAD21
KNOP1
SEC61G
SETMAR
TAOK2
GDI2
USP22
GNAT2
AMPD2
PKN2
HDGF
UBAP2L
C1orf43
PSMB6
PTP4A2
RIOX2
CMSS1
SFXN4
SNX5
MGME1
FUS
EIF4A1
MFF
INO80
IER3
FLOT1
RPUSD4
FAM118B
HSPA9
STK19
DXO
SRM
ARHGAP11A-SCG5
ARHGAP11A
RASA1
QSOX2
FANCD2
ADCK1
SPATC1
PUM2
ZSCAN22
MRPL45
CLTC
CFAP20
NOL10
SMIM12
UBA6
PER2
P4HB
CENPE
RNASEH1
B3GAT3
POLR1B
HDHD5
TBC1D22A
UBA52
JMY
L3HYPDH
JKAMP
MTF1
COQ2
ZNF460
HDAC2
KANSL2
LMNA
FABP5
NFIB
PCID2
CUL4A
GPR89A
RPIA
ATXN1L
SLC5A3
MRPS6
ADGRB1
NR1D1
DCTD
IRF2BP2
SELENOO
STBD1
TMA16
NEURL4
TMPRSS9
PIMREG
EPRS1
KHDRBS1
RANBP3
SHQ1
GNPNAT1
TARBP1
ANKRD40
RWDD2B
LDHB
NAA10
CCDC188
RGS10
SP3
SLC35B2
C8orf37
TMEM70
ELOC
MCIDAS
MFAP2
AHCY
CTSC
N6AMT1
TAMM41
DUS3L
HPX
SERTAD2
MAP4K5
ATL1
BHLHE40
CTBP2
TMEM121
SRSF10
SCAF11
ARHGEF10
ICE2
MICOS13
HSD11B1L
FBL
SLC2A4RG
LIME1
SUGP2
ARMC6
HAUS5
RNF166
CTU2
ANP32A
FARSB
ZC2HC1C
ACYP1
KANK1
PSMB2
ZNF292
SPG7
NTMT1
YRDC
C1orf122
ELAC2
PFN2
MET
MICALL1
SLC9B2
APP
EXOSC5
BCKDHA
SHLD2
GLUD1
FAM133B
CST6
GPX1
THBS4
MTX3
CAMLG
C2CD2
TOMM20
STARD7
TARS1
NUP153
FAM187A
EFTUD2
CCDC103
STEAP1B
SFT2D3
IFRD2
MCMBP
LDLRAD3
C16orf70
TUBA1B
PMPCA
ENTR1
CKAP5
P2RX2
LRCOL1
TBCB
POLR2I
OVOL3
WTIP
NUDT9
PWP1
ITGB3BP
EFCAB7
INPP5A
WIPF1
TSGA10
SPRED1
IGF2BP1
RASAL2
EBAG9
COL19A1
FAM124A
RPS16
SUPV3L1
SEC61A1
ATP5F1E
NBEAL2
CCDC12
ADPGK
PALM2AKAP2
C12orf73
ING5
WASHC2A
LRP6
PXK
RNPS1
DNAAF2
POLR1F
TXLNA
FBXO5
SLC6A15
C12orf66
PHF3
B4GALT2
ATP6V0B
BZW2
ANKMY2
COIL
MACIR
EIF3A
RPS5
CHD1L
LRRC59
PIK3R3
LSG1
GCLM
RASSF1
SETD7
UBALD1
PURB
JPT2
RPE
CLDN1
RPLP0
WDR17
EVX2
ZNF263
MARCHF9
CDK4
B4GALT7
EIF4E
ARF6
SOX12
ACOX3
TRMT44
GOLGA3
SHMT1
HIP1R
RMDN3
SUGCT
MPLKIP
CCDC125
PHF19
NQO1
HAX1
ZNF84
BRAF
HPS5
GTF2H1
NOM1
TRIM8
CHD9
LANCL2
ZBTB24
WNK1
ORAI1
SLC12A9
XIAP
DNA2
TIMM17A
FXN
PAPSS1
MAP3K7CL
CCT8
SSB
EPB41
ANK1
LRRC40
MTLN
UTP14A
CRLS1
SLX1B
SLX1A
BOLA2B
BOLA2
UNG
ALKBH2
SLC49A4
HSPBAP1
ERLIN2
MXD3
GLRX5
SELENOH
ASPSCR1
HNRNPL
GTF3C3
PRMT3
ZC3H8
NOP9
DHRS1
ZNF516
HNRNPA2B1
CBX3
COLEC11
SYT17
LYPLA1
MRPL40
HIRA
CUTC
COX15
COPS7A
CDCA8
C1orf109
IMPACT
URI1
KTN1
HSPB8
UNC79
BTBD7
CYCS
MMAA
HSPA8
TM2D3
FBXL22
EIF3M
MLXIP
XPO6
RHOQ
ATP6V1E2
STK4
ZNF496
EEPD1
GPR176
PFKFB3
BATF3
MKRN2OS
MKRN2
SDAD1
PXT1
KCTD20
RBBP8
TNS2
KHK
LDAH
KMT2E
POLE4
DDX5
CEP95
ANKRD50
EMC8
COX4I1
EIF1AD
BANF1
PIH1D2
NKAPD1
TAF9
RAD17
AK6
ERCC6L2
NOL7
CNPY3
SLC35E1
TNPO1
SMC3
PPP1R15B
PITPNC1
STYXL1
MDH2
DEGS1
ENG
NFE2L1
MRPL42
DRAM1
BCL2
CHN1
PPP2R3B
CTCF
SDF4
B3GALT6
NDUFA10
OR6B2
MAPK8
COX20
SETD5
SAMM50
WSB2
DDI2
PIM3
ADK
ZNF333
PDCD2
RIOK1
CAGE1
ULK3
DDX46
CAST
STEAP1
COA7
MICALL2
RPS8
RPUSD2
CCDC32
DLX4
PSD3
YEATS2
UBE2D3
CISD2
NME6
CDC42EP1
MVB12A
CLIC3
NSMCE4A
CCDC88A
SPCS3
ARAP3
IPO13
ITPA
DDRGK1
GFM1
CLIP2
SCFD2
TFAP4
UBE2M
CHMP2A
PPP4R2
ZDHHC3
EXOSC7
SLC2A1
SLC25A40
DBF4
TUBA1C
CTHRC1
TNIP1
UBQLN4
LAMTOR2
LARP4
FAM186A
ZBTB42
AKT1
SLC39A13
RPL18A
TXNDC5
TBC1D24
NTN3
PTDSS1
MTERF3
TOP3A
SMCR8
CCDC124
PGRMC2
FAM149B1
ECD
PSMC2
DNAJC2
MRPS15
URB1
AXL
INSIG1
CDKL1
YIPF3
POLR1C
RPS6KB2
PUSL1
ACAP3
CNDP2
DLAT
POMZP3
TRA2B
DNAJC9
NLE1
ZNF131
PEF1
MRPL23
UNKL
PPM1G
HMGB1
USPL1
PSMD12
PSMB10
CTRL
DNTTIP2
ZNF384
ILVBL
PDSS1
RBM3
STMN1
VPS37B
AVEN
C15orf39
FAM185A
PPP1R3E
BCL2L2-PABPN1
BCL2L2
MVK
RBM43
NUF2
MAK16
KRI1
CDKN2D
ATL2
MRPL24
PARL
ZNF785
G3BP1
NSD1
ZMPSTE24
WDR89
COA1