ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025672 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◣ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

MTRNR2L2
MSH3
DHFR
PMF1-BGLAP
PMF1
MTRNR2L8
MTRNR2L9
GPAM
PEMT
NME1
DRG2
SNX25
CFAP97
MED9
SSNA1
ANAPC2
SLC35E2B
SLC35E2A
DUS1L
PHF7
BAP1
FAF1
ZSWIM7
TTC19
C12orf73
NDUFS7
LAMP1
ZNF296
GEMIN7
RRP1
PCBP1
AMDHD2
TRIAP1
MRPL21
IGHMBP2
CCDC86
NME2
HEXA
PKN2
NOP56
WASHC2C
CIAO3
UTP25
TMEM222
GGCX
POLR1F
CNOT6
COPS3
COMMD1
CCT4
EPRS1
UNC45B
FLCN
AKAP10
HAUS5
GTF2H3
EIF2B1
RGPD2
RGPD1
ZMPSTE24
WASHC2A
SLC39A3
PMP22
ANKRD40
PCID2
CUL4A
GCN1
ADORA2B
TBL3
ITGB3BP
EFCAB7
DLST
TRMT61B
MAGOH
GET4
DENR
SRRD
HPS4
RBM42
TVP23B
SPRYD4
ABT1
ARSG
SLC16A6
ADPGK
RBBP5
EIF2D
JOSD2
ASPDH
ATXN1L
PIGL
NCOR1
RASD1
LSM12
G6PC3
RLF
FBXW8
MARCHF8
RNF166
CTU2
FRA10AC1
PRKAR1B
EED
CCNL1
COL23A1
TACO1
MPHOSPH10
MCEE
DPH5
MPRIP
GARS1
RAD54L2
SEC31A
THAP9
LANCL2
C8orf33
BAX
MRPL15
OTUD7B
CWC25
MRPL44
RPS16
CENPV
NOXA1
B4GALT7
LRRC37A3
SNRPD1
FAM227B
DTWD1
GID4
ATPAF2
PURB
MANBAL
DHX33
MTF2
NT5M
CLN6
GPSM3
ACSF3
SF3A3
SLC39A4
CPSF1
IARS1
RANBP2
NDUFA10
OR6B2
LRRC59
NOP9
DHRS1
TOP3B
TTC4
PLEKHM3
AKIRIN1
MDN1
DPY19L4
ZNF770
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
COX10
NUP54
DNAJC9
RBM39
GTF2H2C
GTF2H2C_2
MRPL16
C2CD2
PLD6
CCDC57
TVP23C
PEX3
ADAT2
GNPDA1
FKTN
GLRX5
RPL6
PTPN11
MAGOHB
NUF2
TSR3
GNPTG
TMEM41A
YBX1
MRPL3
SUPV3L1
AHCY
DDX1
UBB
HS3ST3B1
C1orf74
MRPS18C
HELQ
SLC31A1
FKBP15
ZSCAN22
TBC1D13
UBA1
CYCS
BTBD10
NMNAT1
LZIC
DGKZ
DCAF8
PMS2
AIMP2
POR
SRM
MYO9B
HAUS8
SLC25A33
UTP4
DERPC
CHTF8
PSMF1
PINX1
CAD
TRIP4
SEC13
NFAT5
FRG2C
RAD50
DDX5
CEP95
DUS2
DDX28
TIMM23
CRLS1
NFE2L2
METTL25
CCDC59
MED23
INTS12
GSTCD
SUMF2
GTF2H2
MKRN2OS
MKRN2
MRPL4
SLC39A13
PGAM5
FAM98B
MRPL55
NUDT9
TEX38
ATPAF1
PTOV1
SACM1L
CACUL1
ERLIN2
COA8
BAG5
C10orf95
STK10
LSG1
SSU72
CLCN7
WDHD1
SOCS4
FAAP100
PARK7
TFDP1
SAR1B
YAE1
PEBP1
SAMD13
NOC4L
DDX51
TATDN3
NSL1
TBL1XR1
GOSR2
CALM1
GPHN
SH3GL1
CHAF1A
DCP1A
DRAM2
CEPT1
HNRNPU
FAM156A
FAM156B
NEURL4
SLC25A40
DBF4
PSMG3
SMYD4
RPA1
CYREN
ZNF18
AP5Z1
SPATC1L
NCBP3
CYP20A1
TRIP13
BRD9
CSNK1G2
ZNF639
TRIM25
ZFAND3
TAF4B
TIMM23B
PARG
ZNF286A
PBK
PPRC1
USP15
OAZ3
DNAJC11
VSIG10
PDS5A
STXBP4
COX11
FRG2
EIF3B
USP32
KMT2D
VPS37B
DHX40
ATRIP
ZNF800
NBPF1
ETV3
MAP3K7CL
CCT8
FUS
INTS13
FGFR1OP2
RPL10A
MAP4K5
ATL1
SPRTN
EXOC8
ANKRD26
N6AMT1
PHF12
RAB35
DNAJA3
ADI1
NBEAL2
CCDC12
SUGP2
ARMC6
SMARCA4
XRCC5
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
TUBD1
RPS6KB1
FAM220A
PRRT2
VDAC3
PAGR1
MVP
KHDRBS1
ENTPD6
POLA2
SDHA
CCDC127
CXorf38
PRMT2
APOLD1
RAD21
SMIM11B
SMIM11A
ACTN4
LUC7L2
SRSF10
FAM98A
BNIP3
VPS26B
NCAPD3
LONP1
CATSPERD
SNAP47
JMJD4
ZC3H8
SAYSD1
TMEM143
SYNGR4
BANP
MCRS1
PDRG1
TOLLIP
XPO5
POLH
ATP6V0E2
SAMHD1
FAM122A
ITPA
DDRGK1
CENPBD1
PPP6R1
ZBTB17
GTF3A
RANBP3
ABCF3
DAGLB
EHMT1
RABIF
NPRL3
MAN1B1
FAM24B
RPP38
THAP7
MRPL54
APBA3
SPPL2B
LSM7
CHMP7
CBX5
WIPI2
EID2B
HNRNPA1
HNRNPH1
MYPOP
ZNF12
ABCA3
PRR30
PREB
HNRNPL
RAB18
TMEM250
MIS18A
NDEL1
TK2
CKLF-CMTM1
CKLF
MTHFSD
FMC1-LUC7L2
FMC1
IFNAR1
NAGK
FAM71E1
EMC10
SH3YL1
ACP1
ALKBH5
SLC2A11
XRCC2
CRTC1
PATL1
PITPNB
LOC100287896
LIPT2
KDM8
RCBTB2
MAP2K7
CBY3
PPP1CB
YEATS4
PPP2CA
CDC7
MOK
TMED4
NOB1
FAM200B
SLX4
SELENOI
ADGRF3
FADD
NELFCD
TMEM141
CCDC183
LOC100289561
SOD2
MAP2K2
PTK2
MRPL45
PTPN4
RPL36
HINT1
WDR4
SAFB
SAFB2
ZNF576
IRGQ
USP21
OARD1
NFYA
CHD1
RBM17
OPA1
FUT8
MTCH2
TRIM37
NPM1
SMG9
SRSF1
BRICD5
VPS13A
CACYBP
NANP
ZNF583
HASPIN
FAM120B
NUP107
AMZ2
MRPL24
OSCAR
NDUFA3
THOP1
SGTA
HP1BP3
RALGAPB
TOMM20
RTL10
GNB1L
POLR2J3
NUP50
TRMO
MSL2
GMCL1
DPF2
AKAP1
SNRNP70
CCNQ
TDP2
ACOT13
CCT5
ATPSCKMT
THAP5
DNAJB9
SPOP
SARS1
EEF1AKMT1
ACAT2
SRRM1
TOR1AIP2
TOR1AIP1
BLOC1S4
TAX1BP3
EMC6
CRB1
CAPZA2
GATD3B
GATD3A
POM121
INTS7
DTL
DYNC2I1
ASNSD1
ASDURF
TMEM139
CASP2
GDF5
CEP250
THOC3
COP1
SMIM14
PPME1
C2CD3
FBXO31
NAPG
GRB2
DHDDS
AP3B1
UNG
ALKBH2
LRFN3
RAD23A
FBRS
SPDL1
ARFGAP3
DYRK1B
PBLD
HNRNPH3
TBC1D5
TMEM209
SSMEM1
RNF149
HSD17B8
MAP1LC3B
SHBG
FXR2
C6orf136
CDC34
USP10
STS
PUDP
MRS2
WDR13
EPS15L1
U2AF2
XPO7
PDXDC1
NUP214
UBE2M
CHMP2A
PAPSS1
TMEM70
ELOC
IPMK
CISD1
WDR74
NDUFA8
MORN5
RBAK-RBAKDN
RBAK
ZMYM4
HSF1
BOP1
C8orf48
SLC39A7
RXRB
SRD5A1
NSUN2
EIF5A
ESRRA
CATSPERZ
WDR18
PRELID3B
USO1
TMEM104
NAT9
SMARCC1
TASOR2
SEC22C
ARPC2
ZNF638
PALB2
DCTN5
CC2D1A
C19orf57
ZNF664-RFLNA
ZNF664
CCDC92
TIGD1
EIF4E2
HINFP
RSL1D1
SYS1
MTG1
MYL5
ATP5ME
TMEM63B
MRPL14
SCAF11
ERCC6L2
KIFAP3
TFB2M
CNST
UROS
BCCIP
MORF4L1
TMEM43
CHCHD4
UTP18
MBTD1
TIGD6
HMGXB3
GZF1
KCNN1
MKNK2
MINK1
TMEM63A
RPL8
RPS7
CCDC93
PPP2R3B
C15orf40
ZBTB45
C5orf24
STYXL1
MDH2
SLC25A11
RNF167
SRCAP
LOC730183
MPC2
MAPKAP1
DCAF6
WDR43
CDC5L
TENT4A
GID8
DIDO1
DFFB
CEP104
POLR2J2
DSN1
POP7
DLGAP4
EID1
NUDCD2
HMMR
MRM3
GLOD4
NBPF3
TOPORS
SMIM27
MRNIP
GOLGA1
ALG8
HBS1L
POLR2J
SCAND1
PARP6
PUM2
SKA3
MRPL57
AURKAIP1
FIP1L1
PUF60
ING1
MAPKAPK5
CBWD5
PRDM4
PIAS4
TIA1
NR1D1
CPLANE2
CBWD3
C6orf89
TMX1
ENDOV
PTBP1
TSEN2
ZZZ3
PHF23
AHCTF1
LINS1
ASB7
MBD1
RFX1
PFKFB4
PCGF1
LBX2
UPF1
CLPTM1L
B9D1
ZBTB14
COPB2
CBWD6
AASDH
WWP1
RPS29
WRNIP1
NOP16
HIGD2A
GPBP1
ZBTB2
TIPIN
CBARP
ATP5F1D
CFAP410
RPS19
MARCHF7
NAPB
RPRD2
TSACC
CCT3
TAOK1
TTC32
RNF32
MAK16
POFUT2
ATAD3A
WWOX
ZNF248
AMACR
ARHGAP35
KIF22
ZNF34
SLC15A4
C11orf80
PRKDC
MCM4
ANO10
ABHD5
TAS1R1
NOL9
NFXL1
SBNO1
NOP14
GRK4
C8orf37
NUP153
ARF4
ZFP91
LPXN
IQCC
CCDC28B
SRRT
TSSC4
PPP4R3B
DNMT1
FZR1
PRPF39
PSMB2
CNOT4
STX1A
TMEM79
SMG5
SIRT5
PGRMC2
UIMC1
KAZALD1
ZNF692
CCNC
MLX
COASY
HSPA4
MAD1L1
ZC3H14
CAPN7
POLRMT
GPAA1
EXOSC4
TMEM18
ATP5PO
VPS13C
AP2B1
METTL22
ECHS1
DCDC2B
TMCO1
EIF2S2
ABHD10
KDM3A
SPEN
DHX9
CENPS-CORT
CENPS
CCSER2
C1orf53
RAD23B
NRF1
EIF2S1
COQ9
CIAPIN1
ATP6V1D
TUBGCP5
INO80C
SREBF1
ATP5MC2
SRSF11
GABARAP
PPA1
RPL12
LRSAM1
UQCR11
VMP1
PTRH2
SNX5
MGME1
EHD1
ZNF182
SPACA5B
SPACA5
TMEM109
SUPT5H
ZNF329
TMED3
SMG7
SPG7
NAT10
VMAC
NDUFA11
TIGD5
EEF1D
SLC30A5
XPC
LSM3
CD320
E2F6
DVL2
ZNF652
NAA35
RPS6
ICMT
CSNK1A1
TMX3
CCDC102B
MOCS2
DNAJC27
LTV1
ELP6
NOL11
PAPOLA
CLIP4
NAA38
THAP12
GVQW3
UBE2D3
TMEM120B
YIPF2
TIMM29
HEXIM1
UBR3
METTL5
RFC5
SPECC1L
RNF151
CEP350
TAOK2
SEH1L
MATR3
QRICH1
DHX34
MTHFD1
PGP
SPAST
DLD
EIF1AD
BANF1
WDR73
NMB
PLEKHA8
FKBP14
NUP62
IL4I1
ATF5
KCTD13
ERGIC2
RPS28
NDUFA7
KATNIP
GTF3C1
ZNF473
VRK3
AKAP11
TRAPPC2
OFD1
ZDHHC12
UHRF2
CARNMT1
MRTFB
RPS11
GPATCH3
ANKFY1
TRAM1
ARF3
ASXL1
PCIF1
CNP
RAB33B
TMEM88
CYB5D1
CBLL1
RNF130
MSRA
FITM2
SCAMP5
SF1
NKTR
TBCCD1
DNAJB11
BRD2
ZBTB21
PGAM1
CSDE1
RFXANK
BORCS8-MEF2B
BORCS8
CAND1
SMIM10L1
PRH1-TAS2R14
PRH1
ACAD9
PIGF
CRIPT
LAGE3
LIG4
COX6A1
ABHD13
MRRF
RPL17-C18orf32
RPL17
NCOA4
ERCC6
CEP20
UGGT2
ARMC2
FSIP1
ZNF526
IPO11
SCML1
PURA
LRPAP1
ASCC1
ANAPC16
PDCL3
EXOSC10
ZMYM1
PRDX1
APC
MARS2
APTX
GAS8
DBNDD1
FANCD2
SLC35A4
APBB3
PPP5C
S100A13
CHTOP
PTTG1IP