ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025673 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◣ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

SNX25
CFAP97
MTRNR2L2
MSH3
DHFR
PEMT
MTRNR2L8
PMF1-BGLAP
PMF1
NME1
UTP25
NME2
DRG2
MTRNR2L9
CAD
ZNF296
GEMIN7
THOP1
SGTA
LSM12
G6PC3
MSTO1
GTF3C4
DDX31
SNRPD1
AKAP10
PTDSS2
CCDC86
GARS1
ZSWIM7
TTC19
GATAD2A
MTHFD1L
SRSF1
GID8
DIDO1
SLC25A10
EIF3B
GOLIM4
TBL1XR1
TENT4A
YBX2
HMGA1
SMYD2
PCBP1
DR1
GABPB1
GET4
SAMD10
PRPF6
EEF2K
PPRC1
PRKAR1B
SNF8
FAF1
CLN6
GCN1
COPS3
KEAP1
ZNF485
LRRC58
EIF5A
PARP1
TMEM248
SCAND1
UTP4
DERPC
CHTF8
CBWD5
CBWD3
CBWD6
DHX33
PMS2
AIMP2
NOC4L
DDX51
SPRYD4
NRAS
LARP1
HNRNPU
TRIAP1
DCP1A
DIAPH1
METTL1
EEF1AKMT3
CYP27B1
MAN1B1
PLD6
IGF2BP3
FNTA
RAN
PBRM1
GNL3
GTF3A
TRMT6
MCM8
ODC1
C12orf73
WNT2B
MAPKAPK5
TSNAX
ADORA2B
CLPTM1L
EIF4H
MLLT1
NT5M
TRPM7
NOL8
CENPP
KMT5B
MRPL15
MDN1
STAMBPL1
DUS2
DDX28
SLC3A2
MBD3
PSMG4
JADE2
PFN2
KLF16
TIMM23
ANP32B
PIGL
NCOR1
SLC16A1
TSR1
SGSM2
CCT2
CENPV
NOL10
LAMP1
SECISBP2
HNRNPA2B1
CBX3
INPP5A
UTP11
PIAS2
KATNAL2
NCL
UBE2G2
OSGIN1
MAP2K2
C16orf91
GOLGA3
COA8
BAG5
SLC25A45
FRMD8
SEH1L
SFSWAP
BAX
DPH5
NPM1
ARSG
SLC16A6
FLCN
PSME3
CELSR3
NOC3L
PTMA
ASAP1
MTHFD2
TIMM23B
PARG
LONP1
CATSPERD
MED9
IARS1
GNPDA1
PLK3
HNRNPL
GAR1
CLUAP1
C16orf90
PAQR7
NUP153
SLC25A33
ATRAID
SLC5A6
KMT2D
CLTC
WDR43
ZSCAN22
SHLD2
GLUD1
SMARCC1
ACBD6
ELAVL3
PDP2
GPR157
FAN1
RCOR3
NELFCD
BRICD5
PGP
TUBB4B
URB2
TAF5L
SLC35E2B
NCBP2AS2
NCBP2
RHOQ
ATP6V1E2
SLC35E2A
CBWD1
TRIM8
FARSB
HES4
EBNA1BP2
CFAP57
ATXN2
FAM156A
FAM156B
GYG1
CTPS1
YBX1
SPHK1
PXK
MRPL55
UBE2K
ATL3
FABP5
SLC9B2
SLC24A1
GNAT2
AMPD2
RAD50
POPDC3
NOCT
PUS1
C1QBP
GCFC2
PPIA
MRPL3
RPS5
PINX1
FAM227B
DTWD1
IFRD2
NACA
HNRNPF
AEN
SIAH2
SOD2
WDR74
WTAP
AKAP1
CLCN7
QSER1
B9D1
YRDC
C1orf122
ZZZ3
SLCO4A1
ANKRD40
PEBP1
RNASEH1
B3GNTL1
TXLNA
ITGB3BP
EFCAB7
USP32
MTLN
HAGHL
CCDC78
ZC3H8
NUP50
DUX4
SPTSSA
R3HDM2
INHBC
RPIA
CTSC
IMPACT
SUGCT
MPLKIP
HSPA9
ZNF202
THNSL1
FBXW8
ZNF326
RAI14
TAOK2
EMC8
COX4I1
MRPL21
IGHMBP2
RNMT
FAM210A
PUM2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NOLC1
RALGDS
METAP1
TBRG4
PRPF3
SEC31A
GPSM3
PDS5A
EIF3A
EEA1
ANP32A
SNX5
MGME1
PPAT
PAICS
MAP2K3
SUPT3H
C10orf95
ZNF3
CHD9
RWDD2B
METAP1D
PXT1
KCTD20
ATAD2
DCTD
ADGRB1
LSM4
TXNL4A
RBFA
RRM2
NOP16
HIGD2A
USP36
TRMT61A
FOXK1
MID1IP1
EPOP
TRMT61B
HS3ST3A1
TOMM34
SLC39A14
RAD9A
EIF2D
EPRS1
STK19
DXO
TSPAN4
POLR2L
TRABD
PKP4
CCDC148
TRIP6
MAT2A
TTC7A
MCFD2
ADCK1
STBD1
SEC14L1
GFPT1
USP42
ICE2
AKT3
RBM28
SLC44A1
MICALL1
SUGP2
ARMC6
SIK1B
SIK1
SRSF9
DYNLL1
CYCS
RBBP8
MFAP2
GPAM
ZKSCAN2
MRPL4
GDI2
AGPAT5
PHF3
TET3
PYURF
PIGY
HERC3
NLE1
GCLM
BRWD1
DNAJC27
SREK1
AATF
BHLHE40
NUDCD2
HMMR
NR1D1
PRKDC
MCM4
SELENOO
CACNB3
YDJC
CCDC116
LRRC37A3
KTN1
IVNS1ABP
CARNMT1
MMAA
NT5C3A
FBXO5
TAF4B
MTF2
GTF2H2
NDUFS1
EEF1B2
DIMT1
HLTF
OSGEP
APEX1
ZNF384
TRPC4AP
TMEM268
KCNJ18
KDM6B
CRLS1
ZNF333
CITED2
PALM2AKAP2
PFAS
CTC1
BCAT1
LRP6
TEX46
KDM1A
ARL4A
C8orf33
HPS5
GTF2H1
UBAP2L
C1orf43
RPS23
ATP6AP1L
NDUFS7
TRAP1
ZNF410
GTF2H3
EIF2B1
PHF7
BAP1
SELENOH
UNG
ALKBH2
INO80
ZFP36L2
QSOX2
GPR89A
STARD7
DPY19L4
FAM83G
QTRT1
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
EIF1AD
BANF1
CCDC125
RPLP0
WDR3
GDAP2
RRP1B
HSF2BP
CTNNB1
TXNDC5
LCOR
TBL1X
PIK3R3
ORAI1
KAT5
CZIB
TNS2
BCL2
RAD21
SDF4
B3GALT6
PCID2
CUL4A
EIF3D
CNOT8
CHERP
UBE2Q1
TPRA1
NFAT5
COX10
TRIP13
BRD9