ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025673 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◣ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

SNX25
CFAP97
MTRNR2L2
PEMT
MTRNR2L8
NME1
UTP25
NME2
DRG2
MTRNR2L9
CAD
GEMIN7
SGTA
G6PC3
MSTO1
GTF3C4
DDX31
SNRPD1
AKAP10
PTDSS2
CCDC86
GARS1
ZSWIM7
TTC19
GATAD2A
MTHFD1L
SRSF1
GID8
DIDO1
SLC25A10
EIF3B
GOLIM4
TBL1XR1
TENT4A
HMGA1
SMYD2
PCBP1
DR1
GABPB1
GET4
PRPF6
EEF2K
PPRC1
PRKAR1B
SNF8
FAF1
CLN6
GCN1
COPS3
KEAP1
ZNF485
LRRC58
EIF5A
PARP1
TMEM248
SCAND1
UTP4
DERPC
CHTF8
CBWD5
CBWD3
CBWD6
DHX33
PMS2
AIMP2
NOC4L
DDX51
SPRYD4
NRAS
LARP1
TRIAP1
DCP1A
DIAPH1
METTL1
EEF1AKMT3
MAN1B1
PLD6
FNTA
RAN
PBRM1
GNL3
GTF3A
TRMT6
MCM8
ODC1
C12orf73
WNT2B
MAPKAPK5
TSNAX
ADORA2B
CLPTM1L
EIF4H
MLLT1
NT5M
TRPM7
NOL8
CENPP
KMT5B
MRPL15
MDN1
STAMBPL1
DUS2
DDX28
SLC3A2
MBD3
PSMG4
JADE2
PFN2
KLF16
TIMM23
PIGL
SLC16A1
TSR1
SGSM2
CCT2
CENPV
NOL10
LAMP1
SECISBP2
CBX3
INPP5A
UTP11
PIAS2
KATNAL2
NCL
UBE2G2
OSGIN1
MAP2K2
C16orf91
GOLGA3
COA8
BAG5
SLC25A45
SEH1L
SFSWAP
BAX
DPH5
NPM1
ARSG
SLC16A6
FLCN
PSME3
CELSR3
NOC3L
ASAP1
MTHFD2
TIMM23B
PARG
LONP1
CATSPERD
MED9
IARS1
GNPDA1
PLK3
HNRNPL
GAR1
CLUAP1
PAQR7
NUP153
SLC25A33
SLC5A6
ATRAID
KMT2D
CLTC
WDR43
ZSCAN22
SHLD2
GLUD1
SMARCC1
ACBD6
PDP2
GPR157
FAN1
RCOR3
NELFCD
PGP
TUBB4B
URB2
TAF5L
SLC35E2B
NCBP2AS2
NCBP2
RHOQ
ATP6V1E2
SLC35E2A
CBWD1
TRIM8
FARSB
HES4
EBNA1BP2
CFAP57
ATXN2
FAM156A
FAM156B
GYG1
CTPS1
YBX1
SPHK1
PXK
MRPL55
UBE2K
ATL3
FABP5
SLC9B2
SLC24A1
GNAT2
AMPD2
RAD50
POPDC3
NOCT
PUS1
C1QBP
GCFC2
PPIA
MRPL3
RPS5
PINX1
FAM227B
DTWD1
IFRD2
NACA
HNRNPF
AEN
SIAH2
SOD2
WDR74
WTAP
AKAP1
CLCN7
QSER1
B9D1
YRDC
C1orf122
ZZZ3
SLCO4A1
ANKRD40
PEBP1
RNASEH1
B3GNTL1
TXLNA
ITGB3BP
EFCAB7
USP32
MTLN
ZC3H8
NUP50
SPTSSA
R3HDM2
RPIA
CTSC
IMPACT
SUGCT
MPLKIP
HSPA9
ZNF202
THNSL1
FBXW8
ZNF326
RAI14
TAOK2
EMC8
COX4I1
MRPL21
IGHMBP2
RNMT
FAM210A
PUM2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NOLC1
RALGDS
METAP1
TBRG4
PRPF3
SEC31A
GPSM3
PDS5A
EIF3A
EEA1
SNX5
MGME1
PPAT
PAICS
SUPT3H
C10orf95
ZNF3
CHD9
RWDD2B
METAP1D
ATAD2
DCTD
PXT1
KCTD20
LSM4
TXNL4A
RBFA
NOP16
HIGD2A
USP36
TRMT61A
FOXK1
EPOP
TRMT61B
HS3ST3A1
TOMM34
SLC39A14
RAD9A
EIF2D
EPRS1
STK19
DXO
TSPAN4
TRABD
PKP4
CCDC148
TRIP6
MAT2A
TTC7A
MCFD2
ADCK1
STBD1
SEC14L1
GFPT1
USP42
ICE2
AKT3
RBM28
SLC44A1
MICALL1
SUGP2
ARMC6
SIK1B
SIK1
SRSF9
DYNLL1
CYCS
RBBP8
MFAP2
GPAM
ZKSCAN2
MRPL4
GDI2
AGPAT5
PHF3
TET3
PYURF
PIGY
HERC3
NLE1
GCLM
BRWD1
DNAJC27
SREK1
AATF
NUDCD2
HMMR
NR1D1
PRKDC
MCM4
SELENOO
CACNB3
YDJC
LRRC37A3
KTN1
IVNS1ABP
CARNMT1
MMAA
NT5C3A
FBXO5
TAF4B
MTF2
GTF2H2
NDUFS1
EEF1B2
DIMT1
HLTF
OSGEP
APEX1
ZNF384
TRPC4AP
TMEM268
CRLS1
ZNF333
CITED2
PALM2AKAP2
PFAS
LRP6
KDM1A
BCAT1
ARL4A
C8orf33
HPS5
GTF2H1
UBAP2L
C1orf43
RPS23
ATP6AP1L
NDUFS7
TRAP1
ZNF410
GTF2H3
EIF2B1
PHF7
BAP1
SELENOH
INO80
ALKBH2
ZFP36L2
QSOX2
GPR89A
STARD7
DPY19L4
FAM83G
QTRT1
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
EIF1AD
BANF1
CCDC125
RPLP0
WDR3
GDAP2
RRP1B
HSF2BP
CTNNB1
TXNDC5
LCOR
TBL1X
PIK3R3
ORAI1
KAT5
CZIB
TNS2
BCL2
RAD21
SDF4
B3GALT6
PCID2
CUL4A
EIF3D
CNOT8
CHERP
UBE2Q1
TPRA1
NFAT5
COX10
TRIP13
BRD9
TRIM16
HPS1
DDI2
URB1
FAM120A
FAM133B
THOC5
HDGF
MAP4K5
ATL1
STEAP1B
WDR17
GTF3C6
PSMA2
TVP23B
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
DNAJC2
ZC3H6
R3HCC1
PWP1
ING5
ZNF276
VPS9D1
ANKLE2
ADPGK
MACIR
PEX3
ADAT2
MTERF4
ZBTB25
ZBTB1
RPS16
APP
ZNF598
SLF2
POGK
ZBTB24
GTPBP4
BHLHE40
NBPF1
DCAF8
KNOP1
ZBTB44
TSEN54
CASKIN2
STK4
ZMPSTE24
PET117
KAT14
G3BP1
DDX42
CCDC47
MRPS17
USP14
GNB2
MUC1
TAF5
CNBP
CHD1L
THUMPD3
MCIDAS
PAPSS1
SPG7
DNAJC11
EIF3M
NEURL4
FLVCR1
REPIN1
UTP18
MBTD1
RNF166
CTU2
HK2
KPNB1
RIOX2
BUD13
GPN3
FAM216A
ENO1
WDR31
CALM1
ADK
LANCL2
PUSL1
ACAP3
OTUD7B
KCNQ5
RRS1
L3HYPDH
JKAMP
DNLZ
BRAP
ACAD10
PLCB4
TIPIN
PES1
CCDC88A
SHMT1
PUF60
HMGB1
USPL1
MVK
USP22
DGLUCY
AKR1A1
GNAI2
CDK13
GNA13
TMEM258
FEN1
MTCH1
RAB3IL1
SRSF11
LRRC40
FAM20B
ZFP62
KHDRBS1
POLR2J3
TBL3
SREBF1
B4GALT7
URI1
SEC61A1
ZNF236
MRRF
FXN
C16orf70
SP3
FANCI
HSF1
BOP1
C12orf29
WASHC2C
PPAN-P2RY11
PPAN
SH2B2
CDK4
PSMB2
PGRMC2
MRPL40
HIRA
SEC13
HEATR1
SMIM12
ZNF292
CANX
DEGS1
HSPE1-MOB4
HSPE1
HSPD1
USP9X
SCFD2
MARVELD1
MTF1
ATL2
PIP4P2
CXCL5
STAG1
RASSF1
BCL7C
SNRPG
CCNL1
SPTY2D1
PSMF1
SRRM2
TIMM17A
NOM1
FCHSD2
B4GALT2
WDR18
ZFP91
DDX19A
INTS1
TTLL4
ZNF121
PLAC8
N6AMT1
CCDC12
PPP4R3B
C1orf53
CSE1L
POLR1F
TMEM41A
PDPR
UBA52
ZNF639
YARS1
S100PBP
BCAR3
SCO1
ADPRM
PDHB
HDAC7
TRAF3
SMC3
SCD
ARRDC2
TBCCD1
UBE2S
NSMF
SRM
POLR3D
RBBP7
AMDHD2
PTDSS1
MTERF3
SAMD13
MICOS13
HSD11B1L
VARS1
MARCHF8
NUF2
NAT10
TATDN1
NDUFB9
NUDT1
MRM2
ZMYND19
MORF4L2
CDCA4
TMEM70
LSG1
MRPS25
SLTM
NR1H3
ACP2
SLC35G1
MDM4
COPS7A
PRR7
SLC35B2
XPOT
PUS7
RNF220
PAQR3
PREP
STX16
RRP15
FBL
SERBP1
KANSL2
TRA2B
GPR176
CCDC138
NOB1
TSPAN10
NPLOC4
TACO1
ZC2HC1C
ACYP1
EIF4B
PFKFB3
ACSF3
RBM39
PAPOLA
KDM2A
ERLIN1
PURB
RPL18A
TOP3A
SMCR8
FRAT2
RNF103-CHMP3
RMND5A
PACS1
PARP16
WDR4
RSL1D1
MTG1
SF3A3
MTIF2
TRUB2
COQ4
ACYP2
DPH6
PSME4
GSR
SCMH1
UBE2D3
TUBGCP6
GID4
ATPAF2
NUDT9
CISD2
PAFAH1B2
PMPCA
ENTR1
AEBP2
GNPNAT1
LARP4
PHF19
E2F5
ARID1B
REV1
FAM98A
RPL8
LDHB
COQ8A
FLRT2
UNKL
ELAC1
TRIM32
ASTN2
JOSD2
DLST
TOP1
SPATA1
GNG5
IDE
HSPA8
DUS3L
P4HB
SSB
GEMIN8
YTHDF2
TMEM17
PMP22
LTV1
TMA16
GOSR2
AP3S1
PSD3
EDN1
NOL11
TP53BP2
POLR1B
NOTCH2
RSBN1L
MLXIP
DLAT
THRAP3
SPOUT1
RANBP3
EED
ARRDC3
MRPL44
ZC3H15
NDUFA10
AVEN
KANSL1
LRRC59
METTL5
COA1
TRIM47
DHX37
COQ2
GFM1
DYM
ZNF18
ZNF131
RNF126
ALMS1
HRK
CUEDC1
SEPTIN5
HEXA
TMEM230
UCHL3
COMMD6
SYNCRIP
SHQ1
FBXO4
THBS4
MTX3
ATP5F1E
WTIP
ZNF496
SLC39A11
EPM2A
VEGFA
PRMT5
MPHOSPH10
MCEE
GPX1
UAP1
DDX59
DBNL
MRPL42
MKRN2
RMDN3
ANAPC5
ATIC
TAMM41
CHFR
UCHL1
RYBP
STEAP1
MAML3
ZNF770
MEF2D
MALSU1
HACD1
SEMA3D
RPUSD4
FAM118B
ADSS2
AGK
PAAF1
COA4
ARL5A
METTL2A
VPS26B
NCAPD3
CIPC
NKIRAS1
ZNFX1
SAMM50
NR1D2
GTF3C2
ANGEL1
SMIM13
NCK1
GMFB
PTPN13
RAB35
POU2F1
SUMF2
TRIM37
MRTO4
EMC1
CERS6
PRELID3A
FLII
TOMM20
DHX9
FAM228B
SF3B6
RABEP1
BLOC1S6
UBA6
PHF1
TMEM177
GNAI1
TOR1AIP1
EXOSC6
NFE2L2
TARBP1
FBXL4
RASA1
ELOVL1
NFYC
ZNF84
AHCY
MRPS2
C9orf116
PPP5C
KAZALD1
RPL14
LRRC57
HAUS2
UMPS
CTCF
RBM15B
FOXK2
HNRNPR
PRPF40A
ERO1A
ERCC6L2
PPA1
TATDN3
NSL1
PMS1
ORMDL1
KANK1
MVB12A
SLC22A4
DRAM1
INSIG1
FOSL2
INAFM2
VDAC3
TOMM7
POLG2
UTP14A
POFUT1
PLAGL2
GZF1
C15orf61
CAAP1
PRR19
PAFAH1B3
SCARB1
MAP2K7
AASDH
SLC15A4
NOP56
HEMK1
YWHAH
ELAC2
XPO6
MET
CCDC114
GTF3C3
RNF227
ARHGDIA
EIF3CL
EIF3C
SFXN4
PHC2
CD83
DUS1L
NUDCD3
GUSB
GNL2
UBA1
ZDHHC3
EXOSC7
SLC25A40
DBF4
PIM3
TXNIP
PIMREG
POLR2C
ELOA
FAM3C
MRPL23
ZNF148
POM121
U2AF2
ACAD9
HM13
TTC4
NOXA1
DLX4
AXL
PPM1G
PDIA5
NCOA5
COMMD2
NDUFC2-KCTD14
NDUFC2
GLRX2
ATXN7
HOXD8
ABCC4
NUP133
SLC39A13
MRPS15
SLC29A1
DDX10
MXD1
TNS3
CCDC71L
TSPAN17
USO1
MAGOHB