ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX182682 | MCF 10A
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◣ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

N6AMT1
ANKRD26
CCDC12
DNAJA3
C10orf88
SPRTN
EXOC8
ADI1
TUBD1
RPS6KB1
XRCC5
SNAP47
JMJD4
PHF12
SMARCA4
TMEM143
SYNGR4
NUP107
PRMT2
MRPS18C
HELQ
PAGR1
KHDRBS1
RAB18
RAB35
PPP6R1
POLA2
TOR1AIP1
ADPRHL1
POU2F1
CHMP7
MRPL54
APBA3
OPA1
SMIM11B
SMIM11A
NUF2
MRPL24
RABIF
FAM24B
MAP2K7
EIF2D
LONP1
CATSPERD
ACTN4
SAMHD1
SH3YL1
ACP1
RANBP3
SAFB
SAFB2
HNRNPH1
VPS26B
NCAPD3
FAM98A
SUGP2
ARMC6
TMEM101
CXorf38
THOC3
KDM8
EID2B
MAN1B1
MYPOP
XPO5
POLH
RPS7
ABCA3
MIS18A
BANP
OSCAR
NDUFA3
ZNF576
IRGQ
IFNAR1
MSL2
WWOX
DDRGK1
MRPS31
TMEM250
STX16
SDHA
CCDC127
PPP2CA
ZBTB17
TOMM20
ATP6V0E2
RPL36
FAM220A
NAGK
TSSC4
VDAC3
XRCC2
ABCF3
RCBTB2
TFB2M
CNST
DMAP1
SF3A3
ZBTB45
LUC7L2
FMC1-LUC7L2
FMC1
TOLLIP
SAYSD1
NOB1
NME1
RBBP5
NDUFS3
KBTBD4
GTF3A
CKLF-CMTM1
CKLF
MRPL45
RAD21
AURKAIP1
PPIP5K2
SMG7
U2AF2
RPP38
ITGB3BP
EFCAB7
TIGD6
HMGXB3
MCRS1
PITPNB
PDRG1
YIPF2
TIMM29
MED23
TRMO
CENPBD1
SPPL2B
LSM7
UBE3B
KCTD10
LOC100289561
GFM2
CSTF2T
ZSCAN22
RSPH3
TMED4
MRPL21
IGHMBP2
SCAND1
LOC100287896
LIPT2
POM121
REXO4
DCP1A
SCNM1
LYSMD1
TATDN3
NSL1
ALKBH5
HINT1
PARK7
BMS1
MYL5
ATP5ME
ISY1-RAB43
ISY1
ZNF408
ARHGAP1
SNRPB
STK32C
LRRC27
CDK5RAP1
KRR1
MOK
MTBP
MRPL13
ZDHHC6
VTI1A
MBD1
FAF2
UTP3
RRP15
SRSF10
HMGB1
USPL1
DNAJC25-GNG10
DNAJC25
FAM122A
FAM120B
UQCC1
SLC2A11
NUP214
FBXO31
MAP1LC3B
YEATS4
FADD
THAP5
DNAJB9
CBX5
HNRNPA1
CCAR2
CRB1
BRF2
SRRM1
ZNF165
ZNF12
SNRNP70
RARS1
CACYBP
ALKBH3
FAM222B
MST1
TRUB2
COQ4
RTTN
TDP2
ACOT13
DCAF10
CDCA3
WIPI2
RBM17
DCAF8
DAGLB
BORCS7
FAM71E1
EMC10
POLR2J3
SRSF1
ASNSD1
ASDURF
TIGD1
EIF4E2
SLC33A1
ATP6V1G1
SUPT7L
SLC4A1AP
GALK2
COPS2
SELENOI
ADGRF3
TNPO3
TAX1BP3
EMC6
HBS1L
UROS
BCCIP
MAIP1
WDR4
RALGAPB
EIF1AD
BANF1
SMG9
IPO4
MRPL44
GTF2H3
EIF2B1
C15orf40
USP21
THAP7
MRS2
RTEL1
LMAN2
AP3B1
CISD1
IPMK
PREB
CSNK1A1
SYS1
CIAO3
DYRK1B
MTMR9
INTS7
DTL
ING1
ZMPSTE24
DSN1
TACO1
ATP5MC2
SUMF2
MTIF2
NAT10
GABPA
ATP5PF
COP1
PDCD6IP
RPL37
WDR83OS
WDR83
STS
PUDP
SSBP1
CFAP298-TCP10L
CFAP298
TRIP4
KIF22
RPL8
TEFM
EIF2S2
ZNF770
ENTPD6
ARF4
PPME1
C2CD3
FITM2
PRRG2
NOSIP
LINS1
ASB7
EEF1AKMT1
RPL26L1
PALB2
DCTN5
NOL7
TSACC
CCT3
AP1M1
PIH1D2
NKAPD1
PPP1CB
EIF2S1
ATP6V1D
INTS10
ALG10B
NUDCD2
HMMR
C1orf74
TRMT61B
NDUFB3
FAM126B
PDCD6
VPS52
RPS18
COX16
RPS20
MRPL30
MITD1
PEMT
DSTYK
OARD1
NFYA
SLX1B
SLX1A
BOLA2B
BOLA2
GATD3B
GATD3A
INTS12
GSTCD
PHF23
EIF3E
HNRNPL
GOLGA3
RUVBL1
INO80B
ZNF668
ZNF646
PATL1
PPIL3
NIF3L1
TAF12
GNPAT
C1orf131
BLOC1S4
TTC32
CYCS
ZC3H8
INTS2
GDF5
CEP250
LTN1
WDR74
DYNC2I1
NR1H2
FUT8
FEM1A
C17orf97
DDX41
CCDC97
WDR24
PHB2
RRP1
RBM7
C11orf71
KLHL20
INTS5
BTF3
NR1H3
ACP2
TSR3
GNPTG
MEMO1
SENP1
PFKM
ARPC1A
TMEM43
CHCHD4
ENDOV
BOLA2-SMG1P6
CPSF1
SNRPB2
TARS2
FBXW11
VPS13A
IDH3B
POLR2J
MRNIP
RPTOR
SFSWAP
MTERF4
VCPIP1
C8orf44-SGK3
MED18
MTHFSD
PEX3
ADAT2
AQR
SLC25A53
COA6
MAF1
INO80C
SLC39A6
ELP2
TMX3
CCDC102B
NPRL3
BOD1L1
TMEM222
RNF149
HDAC4
ARFGAP3
POLR3F
DZANK1
TMEM230
SLC35A4
APBB3
TFPT
PRPF31
LAMP1
CCDC174
E2F6
TUT1
WDR13
FAM200B
CCT5
ATPSCKMT
NOP16
HIGD2A
GTF2H4
GMCL1
VPS4B
NPM1
DPP9
CFAP410
PCIF1
USP30
CGGBP1
C3orf38
ILF3
KANSL3
RPS14
ALG8
CHMP2A
NBPF1
IBA57
HAGH
FAHD1
INTS13
FGFR1OP2
PARP6
RTL10
GNB1L
NAPG
AAR2
MTG1
DPM3
HEXA
TTC30A
WDR36
ATP5PO
PLEKHA8
WDR11
CDKL3
TMEM115
CLPTM1
TSN
MRPL3
KCTD5
NMNAT1
LZIC
SLX4
NDUFA8
MORN5
MRPL1
HINFP
NUP62
IL4I1
ATF5
CBLL1
ZNF461
MRPL40
HIRA
PTPN4
PAPSS1
HNRNPA1L2
ANO10
ABHD5
SDHAF3
C16orf91
SHBG
FXR2
SLC30A5
GRPEL2
B3GALNT2
SART1
SEC61G
POLR3B
AMZ2
ZNF248
NDUFS7
FRA10AC1
RPL29
GOLGA1
RAD23A
SEPSECS
DFFB
CEP104
CHD1
ASH1L
RAB5IF
STOML2
ZNF2
VPS25
LRRC29
MBTPS2
MRPL48
RWDD1
PSMD14
EIF5A
AIP
MEIG1
SMARCD2
TRIM46
KRTCAP2
PPP6C
VPS50
HEPACAM2
SIRT6
ANKRD24
RPS26
MTOR
RPRD2
MRPL16
ATG5
TM9SF2
MRPL17
IFT172
UFC1
ABHD10
DNAJB12
MTRNR2L8
EID1
KIFAP3
TXNDC9
EIF5B
NUDCD3
UPF1
FKBP1A
NUP54
TMEM242
EIF3F
PPP1R11
FRG1
NOL8
CENPP
VPS45
DUS1L
SNRPE
YJU2
IPPK
TIMM13
SELENOH
SRFBP1
NOL12
EHMT1
COX18
AARSD1
SREK1IP1
CWC27
VPS13B
GPATCH8
ING4
MAPKAP1
SAR1B
TFG
TTC14
SEC11A
S100A13
CHTOP
SUGCT
MPLKIP
TRDMT1
COMMD2
TOMM22
PPIL1
CCNT1
ATP6V0D1
FAM133B
FBXO28
MOCS2
TMEM104
NAT9
HASPIN
MED4
MINK1
EMC4
RPL37A
ZNF692
PSMA2
GTF2H2C
GTF2H2C_2
HEMK1
TEDC1
SEC22B
MTRNR2L2
NGDN
AIFM1
RFXANK
BORCS8-MEF2B
BORCS8
FAM228B
SF3B6
SMIM14
SCAF11
ABCB10
ELP6
PSMF1
MCAT
TRIM37
MTRF1
TMA16
PCGF1
PPAN-P2RY11
PPAN
TIMM9
KIAA0586
CDC7
UBN2
RPLP2
PAPOLA
ZNF473
VRK3
GTF2H2
TMX1
RSL1D1
GID8
DIDO1
EXD2
TIA1
MAPKAPK5
SPG11
YIPF5
KCTD16
ZNF638
CCDC150
DHX34
SSNA1
ANAPC2
NUP50
EIF3K
MAP4K1
PSD
ZC3H3
FIP1L1
SMG8
SNRPD3
GUCD1
PUM3
ALG10
ERCC6L2
GZF1
UGGT2
C17orf75
PPWD1
CENPK
BNIP1
HNRNPH3
PBLD
ERCC5
GTPBP10
PUS10
PEX13
ANGEL2
PPP1R12B
PRCC
FBXO22
UBOX5
FASTKD5
VPS33A
TASOR2
GEMIN7
NDUFA12
MAN2C1
TTC13
ARV1
ZNF251
METTL25
CCDC59
TMEM199
POLDIP2
ZNF561
DHDDS
ARMC2
MRPL53
PRELID3B
ATP6V1C1
PWP1
YBEY
MCM3AP
PSMD6
FAM98B
SEC13
NUDT5
CDC123
SUMF1
TSEN2
NUP153
SCAMP3
RPL38
MPHOSPH10
MCEE
TMEM258
FEN1
LAMTOR5
TERF2IP
KARS1
TOMM7
CASZ1
GATB
PDXDC1
POLR2J2
RFX1
TRAM1
NAA20
ZNHIT1
PLOD3
TDG
RPS12
CC2D1A
C19orf57
C1orf53
MRPL20
CLN5
TOP3B
NUDCD1
LSG1
MRPS33
NR1D1
SKIV2L
NELFE
DNAJC24
DCDC1
ZNF791
ZNF490
ZMAT2
MKRN2
OTUD7B
PPP2R3B
SUPV3L1
RPS6
SF3B2
RMND1
ARMT1
LANCL2
CCNI
RBAK-RBAKDN
RBAK
CSTF1
AURKA
GTF3C3
STARD10
TBL3
TTC4
STX18
PSMA1
FBRS
C2orf74
SPNS1
ZNF384
ZNF182
SPACA5
SLC35B3
RAD54L2
NDUFAF5
ESF1
PSME3
CASP2
ZC3H14
YY1AP1
DAP3
SLC24A1
DDX39B
AAAS
ARPC2
PGAM1
PRPF6
GOLGA4
OAZ3
SPOP
PDCL3
ENDOG
C4orf3
RPS29
RNF6
C12orf73
DHX8
SGTA
COPS7B
COX6C
ACAD9
NDUFA6
SLC25A51
ZNF583
SMAD4
RPL5
SELENOT
PCID2
CUL4A
POM121C
CC2D1B
PGRMC2
GPR137
C6orf89
TBCK
AIMP1
ATAD3A
PIGF
CRIPT
TMEM41A
CENPS-CORT
CENPS
RER1
MORN1
MCOLN1
APC
TMEM106B
DAZAP1
PCNX3
DPY19L4
PLS1
ZNF747
OTULIN
LRRC46
SNX17
EIF2B4
WDR43
STYXL1
MDH2
CARD8
SLC39A7
RXRB
LARS1
ZKSCAN4
ZSCAN25
COX6A1
ELOF1
FAM207A
FBXO38
CCDC30
ZMYND12
PPCS
BNIP3
RAD50
EXOSC4
CNPPD1
RETREG2
SLTM
FARSB
PIGL
DDX1
TXN2
CACTIN
ZC3HC1
MYL12B
SNRPD1
GAPVD1
SEH1L
TMED9
SRRM2
EXOSC2
TSNAX
NSFL1C
USF1
MTCH2
LAS1L
NCBP2AS2
NCBP2
C1QBP
BRIX1
ATG4C
SLX4IP
KLHL18
KIF9
ZC3H15
HM13
ANAPC5
ZC3H10
SLC25A32
DCAF13
OXNAD1
DPH3
MUL1
TCTA
RHOA
WDR5B
ATAD1
RNF14
MFAP3
FAM114A2
ZNF133
UBA5
ACAD11
USO1
GOPC
EXOSC6
RAD51AP1
C12orf4
SPAST
STAG1
THAP12
GVQW3
RSL24D1
ZNF276
PRKAB1
VPS9D1
SMN2
SMN1
C18orf21
IFTAP
FAM227B
DTWD1
TBCB
POLR2I
RPS13
SPCS1
GLT8D1
WASHC5
NSMCE2
LENG8
TMEM175
GAK
SLC35A3
TMEM209
TRNAU1AP
ARF1
DUS2
DDX28
CTDP1
NVL
ZNF180
CWC25
HECTD1
STX6
SKP1
ZFYVE27
TBC1D19
MPDU1
LOC100996842
TMBIM6
HPS5
GTF2H1
WDPCP
MDH1
ZNF846
FBXW4
TRAPPC4
RPS25
EXOSC3
PRDM4
MRPS22
ZBTB43
TRAPPC3
SMU1
VTA1
NMBR
C5orf24
C8orf33
DDX56
SLC3A2
NDUFC2-KCTD14
NDUFC2
MED15
BTRC
WASHC2A
ETFDH
C4orf46
FBXL19
TMEM63A
POLG
GOSR2
NANP
HP1BP3
MFSD4B
ATF6
KIF3A